Basic Information

Gene Symbol
hang
Assembly
GCA_037575425.1
Location
JAYXIM010031884.1:2471-15843[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.073 10 8.1 1.3 3 23 388 409 387 409 0.93
2 19 0.045 6.2 8.7 3.5 3 22 515 534 513 534 0.90
3 19 3.4 4.7e+02 2.8 0.6 1 21 609 629 609 632 0.86
4 19 3 4.2e+02 3.0 0.6 2 21 644 663 643 664 0.93
5 19 0.003 0.42 12.4 0.2 3 23 759 780 758 780 0.96
6 19 7.2e-05 0.01 17.5 0.1 1 23 788 811 788 811 0.96
7 19 2e-05 0.0028 19.3 0.1 2 23 907 928 906 928 0.97
8 19 0.2 27 6.7 3.2 2 23 995 1017 994 1017 0.94
9 19 0.0051 0.7 11.7 0.2 2 23 1026 1048 1025 1048 0.95
10 19 0.00011 0.015 17.0 0.3 1 23 1061 1084 1061 1084 0.98
11 19 0.00016 0.022 16.5 1.1 1 23 1146 1168 1146 1168 0.99
12 19 0.0024 0.33 12.7 0.9 1 23 1176 1199 1176 1199 0.96
13 19 0.034 4.6 9.1 0.1 2 20 1207 1225 1206 1225 0.95
14 19 3.4e-05 0.0047 18.6 0.1 3 23 1298 1318 1297 1318 0.98
15 19 6.5e-05 0.0089 17.7 0.7 1 23 1353 1375 1353 1375 0.97
16 19 0.00016 0.023 16.4 0.5 2 23 1436 1458 1435 1458 0.92
17 19 0.68 94 5.0 0.8 2 19 1478 1495 1477 1497 0.92
18 19 0.022 3 9.7 0.2 3 23 1513 1533 1513 1533 0.98
19 19 0.00081 0.11 14.2 1.3 1 23 1792 1814 1792 1814 0.98

Sequence Information

Coding Sequence
ATAAATCCCGATGATCACCTATCGCTGCGCATCTGTCATGCGTGCATCAGTTACCTGAATTCCTGGCAGAGCTTCAAGAATCGTTGCATTGCCTCGCAAAGTAAACAACGCAGTTGGTTGGATTGCAATAAAAGGCAACAATTGCTCGACAACAATGTTAGCATATCAACGATCGGTGCAGATGGCACcaatcaacagcaacaacaacattcagaGGATGGTGAACAACAAGCACCGAGTCTAGCATCATCGATTTTGGATGGCATATCATCGTTAAAGAAACGAAAATCGTTAACTGTTTATGTGAGTCCTAAAGAAAAAACCCcaactactactactaccactACCAGTGCTAGTATTCCTACCACTACTACTACCACTACTACCACTACTACTGTTGCTACTAATAAACAGCAATTACCAGCAACAATAACGTCCACAGCGTTGCATGTAAAAAagtcacaacaacaacatgaacagcaattgctgctgcaacaacaaatgcCATATAAAAGGTATAGCAGGCCATTTGTGCCTGCAGCTGGTTTAATTGGTGTTGCTGGTGCTGGTCGCCTACAATCGGTGGCTCTGTCACAGCCGCAACCACAGGCTCAGGCACAGGCACCATTGCGTAGAGCCAGGCATTATCATCGCAGTCAACATCAACAGCGGCAACagcaacaccatcagcaacaacaaaaagaattgCAACAACATGTGCAAGCTGAAGTGGAAAAGTATCAaaggcaacagcaacaacagctgcTGCAAGAGCAGCAAAAGTTGCTAGAACAACAGCAattgcagcagcaacagcagcagcagcaacaccaaCATCTACAGCAACTGCAAACGCAGCCAATTGCTGCCGCAGCGTCCACTTCGTGTCAGAGCGCCGCGCAGCAATTGCGTTTCTTTAGACGTTACACGTACAACAACCCTTTGCCAGCTGTAGAAATCAAAGATGAACCCATGGATCCGGATGATGATTACAGCGCCAAACAGCATGACGAGTCTGATGACATGGTTGATCCAACACTCTTCTTGGAGCGCACCGAAGAGGAAGGCGACGAGGCTTTAATGGAGCACATGTCCTATCAATATGAAACGCCACGCCCGCCTATAGAACTTGCGGTCCTTGCCGATACCAAGGAAGCTTCTTGTCGCGCTTGCAATCTGAAGTTCTCGACACGCGCCAATGCGCGTCGTCATGAACGCAACTTACATCCAAACCTTTTCGAACTGTCCACTTCAACGCCAAATAATATGCCCGTCACAAAACCGACGCCCGCGTTGGCCGCCGCCTTAGAGTTGCAACGTGCATCGGCAGCCGCGGTAGCTGCGGCAGAAGCTTCGAAAGCCGCCTCCGGCATTATAACACCGCTCAAATATCGACAGGAAATCGTGAATGCATTCAACAAATGCGAAATAGGTGGTTTCGACTACGAACATCCCGAGAAGTATCAACACCATTTGACTGATGAGAAAATCGTGTTCCTACAACAGAACGACGAGTTCTTACGCCAATACCAAAATATGACTTGCCGTTGCTGCAACAAAACGTATTCGACATACAAGAATTTCATGGCTCATATGCGCAAGAAATATCTGACATTGCCGCGCAACCTTTGCTTCAACTGCCTCAAATTGAACGACTCCAAGGCATTGTTCATATCGCATTTGAAGCGACGTAATTGCATCAATCTGTATAAGGTGTTGCATGCGCTGATGGCGAAGGACTCCAGCTTTGCTGCTGCAGTGACTGCGACAGCGGCGGCGGTGCCCGAGAAGTTGCGCGCTAAGGAGCTGCTCGTGAACAAAATGTATGAATGCAAATTGTGTCCGAAATGGTATCGGCTTAAGTTGGAATTCCGTTCGCACGTTTACGATGAGCATGCCGACATGCAACGCAAGGATACCATGCAGAAACAGTGTTGCTATTGCGGCTTGGAGCTGGAGGATGCCGCCGAACGTAAGCGCCATTACAATAATATGGATTGCATTGTCTCGTTGCGTTGTGTTACATGCGATTCGAAATTCGATAATCATCAGAAATTCCTCGATCATGTCTATGAAAAACATTTGGCCGGTTTTGGCGATCAATCATCAGGAACGGCGCATAATATCAGCGCGATGAGCACTGAGAACTCGCCGGGCAAAAAGTCAACGGCTGGTTTGGGTGGCGCTTCGTCCACCGACGAGTCACGCAGCAGCCATCAGGCCACCTCATCTACACAGCCAAAGTCACAGTATTTCTCGCGTATGCCGCAAGCTTGTCCAATATGTGACCAGCAATATAACAACTATAACAATGTGTTGCGCCACATGGAGTCCAAGCATCCTGATCAATTGCCACAGACTTACAAGTGTGTCAAGTGCGGCATTGGCTATCCACGCCTCTCCAACTTGCGCGAGCATATGGTTAGCGCTCATGCGGCGGACAAGGCGCGTCATACCGGCTTCGAGTACATAGTGAATGCGGACGCGGTGAAAATTGCCTATGGCACTACGCAAAACGTCTATACAGGACGTTATGATTACGTGATGAAAGATTTGATGTCGATAACGAATGGCGGTTCAATCGCTGACGATGACGAGAACTCCAGTGAGCACGCAACCAAAAAAATGCGCATAGATGGCGGTGGCGCTGTGACGACCAGCACTGGTTCTGGCTCCGGCAATGCCAGTGGTAGTGGCAACATGTATAGCAGCCTCAAGGAGTGCCCCATTTGCAATGCGGTCTTCAGCAACAACATAGGCCTCTCTAATCATATGCGCTCGCACAGCGCAGCTGCCCAGAACAGTAGTATGTCAGCAGCAGCGGCAAGCACCAGCAAATCGTCGCCAAGCGGGCTAACCATAACACCACAGCCACCCTCAAAACCAACAACCCCTCCAGCAATGCAGCATCAAACAGCAGTACAAAAGGCGATCTTTAAACGTAGTCTAGAACAGGCCGCCGATCGCCGCTTCCGACGCATGCGTTGTCGCCTCTGCCAACGGCGCTTCTCATCGAAGAAATCCTATCGTTTCCACATGCTGAACGATCATCAAATACGCAATGTGCAATTTATCAAATGCAAATTGTGCGACGCAGAGTTCGCGTACGAAAAGGGCTTGAAGGTGCACATGTTCAAGATACACAACACGCTGCTGAAGGACGAGATGATCGTCAAGCAATTTGAGTGTGATATTTGTTCGATTGTGTATCGCAGTGAGGATCAACTGCAGCAGCACAAAAAGACTGTACATGGCGGCGCTACAGCAGGGGCAGAGCAGAAGGCACAGCAAGGCGGTGATGAGGCGTTGGACGAGTCAAACACAGCCGCAAATCCCGCAGATCGCTCGGGCATATCGACGCCAGTGAGCAATGTGGGCGCAGGCGGCGGTGATCGCAGCACGCTGGATACCTCAACAAGCGGACCGCTGTATTGGTATCAATGCAAGTATTGCCCATCGAACTTTAACACCAACAAGAAACTGGCAattcatataaattcacatGACGAATTCGATTCCAATGACTATTCGTGCAAAGATTGCGGAAATGTGTACAGCGGACGCAAGAGTTTATGGGTGCATCGCTACAAGAAGCATCCACAATTCGCGGAACCCTCGGAGTGTGTGCTCTGCAAAAAGGTCTTCTTCGATAGTCAAATGTTAGAGAATCACATACCGACTTGCAATCGCAAACCGATCACGGCGACTGgcgctgtggccgagagtgccGGCCCACCACCAATTTACAAGCACAAGACCGGCGATGATGACGACGATGAGGCATCGCACGATGCCAGCGGTGTGATTACGACCAATGCGTTGGGTGGCGGTGAGCTCGAGATAACACCAATACCGGCGAGCGGCCTGAAAATCAAGCTACCCGAAGTGGCGTGCACAATATGTGGGCAACGATTCGTCGATCAGGATTTGTTCGCcaaacacatacaaatgcacgaACTGGAATTGTATACAGATAATCCGCTTGCGGCCATGTTTGATACGGGCCCAGCGGATCCGAATCAATTTTACTTGGATCGGGTGAATGACAATGGCGAATATGCTTGTGATCTCTGTAACAAAACGTTTACACAAATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGTGCCAAGCCGACGTGGATCATTCAACCAAAGCAGCGAGGCTATCATCTCAATCTCTGATCCAGACCAACCATCAACATCCACTGGGATTACAAGCAGTGGGTCTTATGCCCAATCCGCAGCACCACTCTTCAAAGTCCCAGAAACGCAAACGCGAACTTAAATGTGAATATTGTCCCTCCACATTCATTAGCAACAACAACCTGCGTCGTCACATCTATGAACTGCATAAAGACGAAATTGGAAATCTACCTGTGCCACCGAAAATCAATACAGATCCCTATCTGCATTGTCGTCGTTGTCAGCAAAAGTTCGAAACGAAAAGCGATTGGATCGAACATAAAGTGGCCGATGCGCGTGTAACGAAACCATTCGGTCCATTCCAGTGGGGCTGTGAGCTATGTGGCGCATACGTGTCACGCAAGGAGAAGCTGATAAATCACATAAACAATCACTTGAAGGAGAAGGAAATAGTACCGGTGCAAGATCAACAGCCGGCGCATGATCAGAATCAGAATCGTGCGAAGTCGACGGTGGTGGCGGCAGCGGCGGCGGCGACGGGAAAAAATGTTGACGACATGATGGACGAGGTGGTGGTGAAGCGAGAACGGGACGATGATAAGGAAGAGTCAAATGATGGTATTAAGGAGGAGGAGGAGTCCGAAGAGGAGGATGGTGTGGTCGATGATGAAGCAGATGAGGAGGGTGAAGAAGAGCAGAAAGCGCATGAAAGAGGGGAGACTGGCAGACGTGGTGCGGAATTAGATGATGAAGTCGATGAGGATGGTTCCGAGGACGAGGAGGATGAGGAATATGAAGATATGGGTGAAATGATGCAGGTTGCAATGACCGAGCATGCCAATCACGATGAAGCGGAGCAGGATGAAGATGACGGTGATGCCGATGAAGCCGATGATGGTGAGGAAGATGCAGACGCAGACGCCGAAGCCGACGAAGCAGACGACGTCGATGACGTTGATGTCCATAATGATGATTCGAATGATGTTACGGCGCCAAATGGTGGTGGTGCTTATGGGCGCGGACCGCCGGTAGCGTCGCAAGTCACAATTGAAGCTATACGCAATTCGACGGACACCACAGGCGACTCATCGCCATCATACGACGAAGACGATGACGATGACAACGACTCGGATGCCGATAGCGATGCAGACAGCGGTGACAGTTCTTCGCAAGCATCCAAAACACCAGCACCAGCGCCGAAAGTGCGCTTTTCATGCGATCTGTGTCGTCTGTTCTTCGATTCGCAACAGGAACTGCAAAAGCATGTGAAGATGCATTTTCTCAACGGGCCCGGCTCGGTGTCATTGACCGAAATCAAGCCAAAGGCAGGCAACAAATCGagtcgcagcagcagcagtgatgTCGTGGCTGTGTAG
Protein Sequence
INPDDHLSLRICHACISYLNSWQSFKNRCIASQSKQRSWLDCNKRQQLLDNNVSISTIGADGTNQQQQQHSEDGEQQAPSLASSILDGISSLKKRKSLTVYVSPKEKTPTTTTTTTSASIPTTTTTTTTTTTVATNKQQLPATITSTALHVKKSQQQHEQQLLLQQQMPYKRYSRPFVPAAGLIGVAGAGRLQSVALSQPQPQAQAQAPLRRARHYHRSQHQQRQQQHHQQQQKELQQHVQAEVEKYQRQQQQQLLQEQQKLLEQQQLQQQQQQQQHQHLQQLQTQPIAAAASTSCQSAAQQLRFFRRYTYNNPLPAVEIKDEPMDPDDDYSAKQHDESDDMVDPTLFLERTEEEGDEALMEHMSYQYETPRPPIELAVLADTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPNNMPVTKPTPALAAALELQRASAAAVAAAEASKAASGIITPLKYRQEIVNAFNKCEIGGFDYEHPEKYQHHLTDEKIVFLQQNDEFLRQYQNMTCRCCNKTYSTYKNFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKDSSFAAAVTATAAAVPEKLRAKELLVNKMYECKLCPKWYRLKLEFRSHVYDEHADMQRKDTMQKQCCYCGLELEDAAERKRHYNNMDCIVSLRCVTCDSKFDNHQKFLDHVYEKHLAGFGDQSSGTAHNISAMSTENSPGKKSTAGLGGASSTDESRSSHQATSSTQPKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSAHAADKARHTGFEYIVNADAVKIAYGTTQNVYTGRYDYVMKDLMSITNGGSIADDDENSSEHATKKMRIDGGGAVTTSTGSGSGNASGSGNMYSSLKECPICNAVFSNNIGLSNHMRSHSAAAQNSSMSAAAASTSKSSPSGLTITPQPPSKPTTPPAMQHQTAVQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRSEDQLQQHKKTVHGGATAGAEQKAQQGGDEALDESNTAANPADRSGISTPVSNVGAGGGDRSTLDTSTSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFAEPSECVLCKKVFFDSQMLENHIPTCNRKPITATGAVAESAGPPPIYKHKTGDDDDDEASHDASGVITTNALGGGELEITPIPASGLKIKLPEVACTICGQRFVDQDLFAKHIQMHELELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCNKTFTQMTALKVHRKWHFRGDSKQCQADVDHSTKAARLSSQSLIQTNHQHPLGLQAVGLMPNPQHHSSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKDEIGNLPVPPKINTDPYLHCRRCQQKFETKSDWIEHKVADARVTKPFGPFQWGCELCGAYVSRKEKLINHINNHLKEKEIVPVQDQQPAHDQNQNRAKSTVVAAAAAATGKNVDDMMDEVVVKRERDDDKEESNDGIKEEEESEEEDGVVDDEADEEGEEEQKAHERGETGRRGAELDDEVDEDGSEDEEDEEYEDMGEMMQVAMTEHANHDEAEQDEDDGDADEADDGEEDADADAEADEADDVDDVDVHNDDSNDVTAPNGGGAYGRGPPVASQVTIEAIRNSTDTTGDSSPSYDEDDDDDNDSDADSDADSGDSSSQASKTPAPAPKVRFSCDLCRLFFDSQQELQKHVKMHFLNGPGSVSLTEIKPKAGNKSSRSSSSDVVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01189745;
90% Identity
-
80% Identity
-