Basic Information

Gene Symbol
hang
Assembly
GCA_027943255.1
Location
JAPTHQ010000525.1:120561-134526[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.067 9.4 8.3 1.3 3 23 194 215 193 215 0.93
2 19 0.041 5.8 8.9 3.5 3 22 321 340 319 340 0.90
3 19 3.1 4.4e+02 3.0 0.6 1 21 415 435 415 438 0.86
4 19 2.8 3.9e+02 3.2 0.6 2 21 450 469 449 470 0.93
5 19 0.0028 0.39 12.6 0.2 3 23 565 586 564 586 0.96
6 19 6.6e-05 0.0093 17.7 0.1 1 23 594 617 594 617 0.96
7 19 1.8e-05 0.0026 19.5 0.1 2 23 713 734 712 734 0.97
8 19 0.18 25 6.9 3.2 2 23 801 823 800 823 0.94
9 19 0.0046 0.65 11.9 0.2 2 23 832 854 831 854 0.95
10 19 9.9e-05 0.014 17.2 0.3 1 23 867 890 867 890 0.98
11 19 0.00014 0.02 16.7 1.1 1 23 952 974 952 974 0.99
12 19 0.0022 0.31 12.9 0.9 1 23 982 1005 982 1005 0.96
13 19 0.031 4.3 9.3 0.1 2 20 1013 1031 1012 1031 0.95
14 19 3.1e-05 0.0044 18.7 0.1 3 23 1104 1124 1103 1124 0.98
15 19 5.9e-05 0.0083 17.9 0.7 1 23 1159 1181 1159 1181 0.97
16 19 0.00015 0.021 16.6 0.5 2 23 1242 1264 1241 1264 0.92
17 19 0.62 87 5.2 0.8 2 19 1284 1301 1283 1303 0.92
18 19 0.02 2.8 9.9 0.2 3 23 1319 1339 1319 1339 0.98
19 19 0.00074 0.1 14.4 1.3 1 23 1597 1619 1597 1619 0.98

Sequence Information

Coding Sequence
ATGTTGCAATTTGGTGTCATATCCACCAAGGCGAATCTATTAAAGTTGGTGTTGATAAATCCCGATGATCACCTATCGCTGCGCATCTGTCATGCGTGCATCAGTTACCTGAATTCCTGGCAGAGCTTCAAGAATCGTTGCATTGCCTCGCAAAGTAAGCAACGCAGTTGGTTGGATTGCAATAAAAGGCAACAATTACTCGACAACAATGTTAGCATATCAACGATCGGTGCAGATGGCACCAATCAACAGCAACAACAACATTCAGAGGATGGTGAACAACAAGCACCGAGTTTAGCATCATCGATTTTGGACGGCATATCATCGTTAAAGAAACGAAAATCGTTAACTGTTTATCCTTTGCCAGCTGTAGAAATCAAAGATGAACCCATGGATCCGGATGATGATTACAGCGCAAAACAGCATGACGAGTCTGATGACATGGTTGATCCAACACTCTTCTTGGAGCGCACCGAAGAGGAAGGCGACGAGGCTTTAATGGAGCACATGTCCTATCAATATGAAACGCCACGTCCGCCTATCGAACTTGCGGTCCTTGCCGATACCAAGGAAGCTTCTTGTCGCGCTTGCAATCTGAAGTTCTCGACACGCGCCAATGCGCGTCGTCATGAACGCAACTTACATCCAAACCTTTTCGAACTGTCCACTTCGACGCCAAATAATATGCCCGTCACAAAACCGACGCCCGCGTTGGCCGCCGCCTTAGAGTTGCAACGTGCATCGGCAGCCGCGGTAGCTGCGGCAGAAGCTTCGAAAGCCGCCTCTGGCATCATAACACCGCTCAAATATCGACAGGAAATCGTGAATGCATTCAACAAATGCGAAATAGGTGGTTTCGACTACGAACATCCCGAGAAGTATCAACACCATTTGACTGATGAGAAAATCGTGTTCCTACAACAGAACGACGAGTTCTTACGCCAATATCAAAATATGACTTGCCGTTGCTGCAACAAAACGTATTCGACATACAAGAATTTCATGGCTCATATGCGCAAGAAATATCTGACATTGCCGCGCAACCTTTGCTTCAACTGCCTCAAATTGAACGACTCCAAGGCATTGTTCATATCGCATTTGAAGCGACGTAATTGCATCAATCTGTATAAGGTGTTGCATGCGTTGATGGCGAAGGACTCCGGCTTTGCTGCTGCAGTAACTGCGACAGCGGCGGCGGTGCCCGAGAAGTTGCGCGCTAAGGAGCTGCTCGTGAACAAAATGTATGAATGCAAATTGTGTCCGAAATGGTATCGGCTTAAGTTGGAATTCCGTTCGCACGTTTACGATGAGCATGCCGACATGCAACGCAAGGATACCATGCAGAAACAGTGTTGCTATTGCGGCTTGGAGCTGGAGGATGCCGCCGAACGTAAGCGCCATTACAATAATATGGATTGCATTGTCTCGTTGCGTTGTGTTACATGCGATTCGAAATTCGATAATCATCAGAAATTCCTCGATCATGTCTATGAAAAACATTTGGCCGGTTTTGGCGATCAATCATCAGGAACGGCGCATAATATCAGCGCAATGAGCACTGAGAACTCGCCGGGCAAAAAGTCAACGGCTGGTTTGGGTGGCGCTTCCTCCACCGATGAGTCACGCAGCAGCCATCAGGCCACCTCATCTACACAGCCAAAGTCACAGTATTTCTCGCGTATGCCGCAAGCTTGTCCCATATGTGACCAGCAATATAACAACTACAACAATGTGTTGCGCCACATGGAGTCCAAGCATCCTGATCAATTGCCACAGACTTACAAGTGTGTCAAGTGCGGCATTGGCTATCCACGCCTCTCCAACTTGCGCGAGCATATGGTTAGCGCTCATGCGGCGGACAAGGCGCGTCATACCGGCTTCGAGTACATAGTGAACGCGGACGCGGTGAAAATTGCCTATGGCACTACGCAAAATGTCTATACAGGACGTTATGATTATGTGATGAAAGATTTGATGTCGATAACGAATGGCGGTTCAATCGCTGACGATGATGAGAACTCCAGTGAGCACGCAGCCAAGAAAATGCGCATAGATGGCGGTGGCGCTGTGACGACCAGCACTGGCTCTGGCTCCGGCAATGCCAGCGGTAGTGGCAACATGTACAGCAGCCTAAAGGAGTGCCCCATTTGCAATGCAGTCTTTAGCAACAACATAGGCCTCTCTAATCATATGCGCTCGCACAGCGCAGCTGCCCAGAACAGTAGTATGTCAGCAGCAGCGGCAAGCACCAGCAAATCGTCGCCAAGCGGGCTGACCATAACACCACAGCCACCCTCAAAACCAACAACCCCTCCAGCAATGCAGCATCAAACAGCAGTACAAAAGGCGATCTTCAAACGTAGTCTCGAGCAGGCTGCCGATCGCCGCTTCCGACGCATGCGTTGCCGCCTCTGCCAACGGCGCTTCTCATCGAAGAAATCCTATCGTTTCCACATGCTGAACGATCATCAAATACGCAATGTGCAATTTATCAAATGCAAATTGTGCGACGCAGAGTTCGCGTACGAAAAGGGCTTGAAGGTGCACATGTTCAAGATACACAACACGCTGCTGAAGGACGAGATGATCGTCAAGCAATTTGAGTGTGATATTTGTTCGATTGTGTATCGCAGTGAGGATCAACTGCAGCAGCACAAAAAGACTGTACATGGCGGCGCTACGGCAGGGGCAGAGCAGAAGGCACAGCAGGGCGGTGATGAGGCGTTGGACGAGTCAAACACAGCCGCAAATCCCGCAGATCGCTCGGGCATATCGACGCCAGTGAGCAGTGTGGGCGCAGGCGGCGGTGATCGCAGCACGCTGGATACCTCGACAAGCGGACCACTGTATTGGTATCAATGCAAGTACTGCCCATCGAACTTTAACACCAACAAGAAACTGGCAATTCATATAAATTCACATGACGAATTCGATTCCAATGACTATTCGTGCAAAGATTGCGGAAATGTGTACAGCGGACGCAAGAGTTTATGGGTGCATCGCTACAAGAAACATCCACAATTCGCGGAACCCTCTGAGTGTGTGCTCTGCAAAAAGGTCTTCTTCGATAGTCAAATGCTGGAGAATCACATACCGACTTGCAATCGCAAACCGATTACGGCGACTGGCGCTGTGGCCGAGAGTGTCGGCCCACCACCAATTTACAAGCACAAGACCGGCGATGATGACGACGATGAGGCATCGCACGATGCCAGCGGTGTGATTACGACCAATGCATTGGGTGGCGGCGAGCTCGAGATAACACCAATACCGGCGAGCGGCCTGAAAATCAAGCTACCCGAAGTGGCGTGCACAATATGTGGGCAACGATTCGTCGATCAGGATTTGTTCGCCAAACACATACAAATGCACGAACTGGAATTGTATACGGATAATCCGCTTGCGGCCATGTTTGATACGGGCCCAGCGGATCCGAATCAATTCTACTTGGATCGGGTGAATGACAATGGCGAATATGCTTGTGATCTCTGTAACAAAACGTTTACACAAATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGTGCCAAGCCGACGTGGATCATTCAACCAAAGCAGCGAGGCTATCATCTCAATCTCTGATCCAGACCAACCATCAACATCCACTGGGATTACAAGCAGTGGGTCTTATGCCCAATCCGCAGCACCACTCTTCAAAGTCCCAGAAACGCAAACGCGAACTTAAATGTGAATATTGTCCCTCCACATTCATTAGCAACAACAACCTGCGTCGTCACATCTATGAACTGCATAAAGACGAAATTGGAAATCTACCTGTGCCACCGAAAATCAATACAGATCCATATCTGCATTGTCGTCGTTGTCAGCAAAAGTTCGAAACGAAAAGCGATTGGATCGAACATAAAGTGGCCGATGCGCGTGTAACGAAACCATTCGGTCCATTCCAGTGGGGCTGTGAGCTATGTGGCGCGTACGTGTCACGCAAGGAGAAGCTGATAAATCACATAAACAATCACTTGAAGGAGAAGGAAATAGTACCGGTGAAAGATCAACAGCCGGCGCATGATCAGAATCAGAATCGTGCGAAGTCGACGGTGGTGGCGGCGGCGGCGGCGGCGGCGGGAAAAAATGTTGACGACATGATGGACGAGGTGGTGGTGAAGCGAGAACGGGACGATGATAAGGAAGAGTCAAATGATGGTATTAAGGAGGAGGAGGAGTCCGAAGAGGAGGATGGTGTGGTCGATGATGAAGCAGATGAGGAGGTTGAAGATGAGCAGAAAGCGCGTGAAAGGGGGGAGACTGGCAGACGCGGTGCGGAATTAGATGATGAAGTCGACGAGGATGGTTCCGAGGACGAGGAGGATGAGGAATATGAAGATATGGGTGAAATGATGCAGGTTGCAATGACCGAGCATGCCAATCACGATGAAGCGGAGCAGGATGAGGATGACGGTGATGCCGATGAAGCCGATGATGGTGAGGAAGATGCAGACGCAGACGCCGACGAAGCAGACGACGTCGATGACGTTGATGCCCATAATGATGATTCGAATGATGTTACGGCGCCAAATGGTGGTGGTGGTGCTTATGGGCGCGGACCGCCGGTAGCGTCGCAAGTCACAATTGAAGCTATACGCAATTCGACGGACACCACAGGCGACTCATCGCCGTCATACGACGAAGACGACGACGATGACAACGACTCGGATGCCGATAGCGATGCAGACAGCGGCGACAGTTCTTCGCAAGCATCCAAAACACCAGCACCAGCGCCGAAAGTGCGCTTTTCATGCGATCTGTGTCGTCTGTTCTTCGATTCGCAACAGGAACTGCAAAAGCATGTGAAGATGCATTTTCTCAATGGGCCCGGCTCGGTGTCATTGACCGAAATCAAGCCAAAGGCAGGCAACAAATCGAGTCGCAGCAGCAGCAGTGATGTCGTGGCTGTGTAG
Protein Sequence
MLQFGVISTKANLLKLVLINPDDHLSLRICHACISYLNSWQSFKNRCIASQSKQRSWLDCNKRQQLLDNNVSISTIGADGTNQQQQQHSEDGEQQAPSLASSILDGISSLKKRKSLTVYPLPAVEIKDEPMDPDDDYSAKQHDESDDMVDPTLFLERTEEEGDEALMEHMSYQYETPRPPIELAVLADTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPNNMPVTKPTPALAAALELQRASAAAVAAAEASKAASGIITPLKYRQEIVNAFNKCEIGGFDYEHPEKYQHHLTDEKIVFLQQNDEFLRQYQNMTCRCCNKTYSTYKNFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKDSGFAAAVTATAAAVPEKLRAKELLVNKMYECKLCPKWYRLKLEFRSHVYDEHADMQRKDTMQKQCCYCGLELEDAAERKRHYNNMDCIVSLRCVTCDSKFDNHQKFLDHVYEKHLAGFGDQSSGTAHNISAMSTENSPGKKSTAGLGGASSTDESRSSHQATSSTQPKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSAHAADKARHTGFEYIVNADAVKIAYGTTQNVYTGRYDYVMKDLMSITNGGSIADDDENSSEHAAKKMRIDGGGAVTTSTGSGSGNASGSGNMYSSLKECPICNAVFSNNIGLSNHMRSHSAAAQNSSMSAAAASTSKSSPSGLTITPQPPSKPTTPPAMQHQTAVQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRSEDQLQQHKKTVHGGATAGAEQKAQQGGDEALDESNTAANPADRSGISTPVSSVGAGGGDRSTLDTSTSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFAEPSECVLCKKVFFDSQMLENHIPTCNRKPITATGAVAESVGPPPIYKHKTGDDDDDEASHDASGVITTNALGGGELEITPIPASGLKIKLPEVACTICGQRFVDQDLFAKHIQMHELELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCNKTFTQMTALKVHRKWHFRGDSKQCQADVDHSTKAARLSSQSLIQTNHQHPLGLQAVGLMPNPQHHSSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKDEIGNLPVPPKINTDPYLHCRRCQQKFETKSDWIEHKVADARVTKPFGPFQWGCELCGAYVSRKEKLINHINNHLKEKEIVPVKDQQPAHDQNQNRAKSTVVAAAAAAAGKNVDDMMDEVVVKRERDDDKEESNDGIKEEEESEEEDGVVDDEADEEVEDEQKARERGETGRRGAELDDEVDEDGSEDEEDEEYEDMGEMMQVAMTEHANHDEAEQDEDDGDADEADDGEEDADADADEADDVDDVDAHNDDSNDVTAPNGGGGAYGRGPPVASQVTIEAIRNSTDTTGDSSPSYDEDDDDDNDSDADSDADSGDSSSQASKTPAPAPKVRFSCDLCRLFFDSQQELQKHVKMHFLNGPGSVSLTEIKPKAGNKSSRSSSSDVVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01189745;
90% Identity
-
80% Identity
-