Ppla072232.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- nfxl1
- Assembly
- GCA_963971165.1
- Location
- OZ020194.1:75746094-75761214[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1e+05 -7.8 5.6 15 19 166 170 165 170 0.81 2 19 0.13 6.6e+03 -0.3 0.4 4 10 201 207 200 207 0.95 3 19 4.8e-08 0.0024 20.2 16.4 1 19 215 232 215 232 0.99 4 19 4.2e-07 0.021 17.2 16.7 1 19 268 286 258 286 0.86 5 19 0.7 3.5e+04 -2.7 1.9 6 10 311 315 310 315 0.90 6 19 2.7e-10 1.4e-05 27.4 12.2 1 19 321 339 321 339 0.99 7 19 1.3 6.5e+04 -3.5 1.0 5 10 363 368 363 368 0.86 8 19 4.3e-05 2.2 10.8 8.6 1 18 374 391 374 392 0.96 9 19 0.88 4.4e+04 -3.0 2.4 1 5 401 405 401 412 0.85 10 19 0.011 5.7e+02 3.1 16.2 1 18 426 443 426 444 0.94 11 19 3.2e-10 1.6e-05 27.2 14.8 1 19 453 471 453 471 0.98 12 19 0.7 3.5e+04 -2.7 1.1 5 10 499 504 499 504 0.94 13 19 0.00017 8.8 8.9 4.5 9 19 519 529 517 529 0.90 14 19 0.038 1.9e+03 1.4 4.6 3 12 540 549 539 549 0.88 15 19 2 1e+05 -4.8 3.5 14 19 577 582 577 582 0.86 16 19 0.00017 8.4 8.9 4.7 1 11 618 628 608 631 0.91 17 19 0.44 2.2e+04 -2.0 1.2 5 10 645 650 645 650 0.92 18 19 4e-05 2 10.9 19.0 3 19 659 675 658 675 0.94 19 19 1.4e-06 0.071 15.5 12.4 1 18 718 737 718 738 0.89
Sequence Information
- Coding Sequence
- ATGAGTAACAGTAGGCCAAAGTCTAATCCTTGGAACAAGAATAATCCTCAAAGACCTAAAAAATCGCCCCAAAATCCTGTTAAAGGACCTCCCTTAAGCTCTACTagtgaatcaaaatttaaagcaGCCCAAGCAAAACTTCAGAGTTctgttaaaaaacatattaaggaCTATGAATCCTCATCAGAAGAAGAAGATTTAGATTCTGCAAATCTTATAGaGGTTATTCTTAAGGAATATACACAAGGTGGAGGAACAAATGACCAAGTTGTGCGCACCAAAACGTTTATTGAGGAATCATTCTTGTCAGGGGTCAATACATGTCTAATCTGTATTTCCAGAGTTAAAAGGGACGATCAGaTATGGGGTTGCTTAAGTTGCTATGGAGTCTTTCATTTAGACTGCATCCAAAGATGGTCCAAGGATACAGTAATGCAGCAGAAGCAGAGGTTAGAAGATCAAACCACAACcagtggaaaaaaattatattggtGTTGTCCAAAGTGTCGATTTGAATATTTCCCAGAACAGTACCCAACTAAATATGTTTGCTTTTGTGGAAAAAAGGAAAATCCCCAATACCAACCATTCTTGGTACCACATTCTTGTGGAGAAATATGTAGAAAAGCTTTGTTGCCACCTTGTGGTCATAATTGTTTATTACTTTGTCATCCAGGTCCTTGTCCACCATGTCCAGTAACGGTTAGTATTTCTTGTTATTGTGGCTCTCAGCAGCCTACAACAAAAAGATGCAGTAACAGAGGTTGGTCCTGTGGAAATAAATGTGGAAAACTGCTATCTTGTGAAAAACACACCTGTAGTGACCCATGTCATGCAGGGGAATGTCAACCATGCTCTAAAAAGAGCATCCAGAAGTGTATGTGTGGTAGACAGCAAAAATTAAGGGACTGTGCTACACCTAATTGGCAGTGTGAGAAGGTCTGTGGAAAACCATTAGATTGTGGCAACCACAAATGTCAAGAAGTGTGTCACGCGGGTGTATGCGATTCCTGCCCGTTAGTTCGGCCTAGAACTTGTCCTTGTGGAAAAACAAAGTATCAACTGCCTTGTACTGAGGACACGCCTACTTGTCCAGATACTTGTGGAAAGCTTTTGGAATGTGGAATTCATCCTTGTAATTTTCGGTGTCATAAGGATAAATGTGGCTTATGTCTGGAAGTTGTAACTAAATCCTGCAGGTGTGGACAACATTCCAAAGAAATACAATGTTGCAAGCAGTACCTCTGCGAAACTAAGTGCAAAAGAATAAGAGATTGCAATAAGCATCCTTGTAACCGAAAGTGTTGTGACGAAAATTGTCCTCCTTGCGAAAAACCCTGCGGACATACTCTACAGTGTGGAAATCACAAGTGTCCGTCAGTTTGTCATCGAGGACCGTGCTATCCTTGTCAACAGACGAACGAAGTATCTTGTAGATGCGGAGCGACAAAAATTACAGTTCCGTGTGGAAGAAAGCATAAGGTGAAGCCACCTAAGTGTTCTAAATTGTGTTTAATTCCTCCGGATTGTCACCATGAAAAACGCGAGAATCACAAATGTCATTTTGGGGATTGTCCCTCGTGTAAGCAAATCTGCAATAAATCAAGAGCAAATTGCGAACATTTTTGTTCAGCACCGTGCCACTCTTCCGTGCTTGTAAAAATAGAAGCTCAAAAAGCGTCAATGCCTTGGGAACAGAGTGCACCTCTAGTAGAAAAAAGAAAGTTACCCTGTCCTGATTGTAAAGTTCCTGTCAAAGTGACATGCTTGGGTGATCATGAGATGGCAGATTGGCCCTGCTATATGGCAAAACCATCAAGTTGTGGCAGGCCATGCGGAAGAGTTTTAAACTGCACTAATCATACTTGTTCCTTACCTTGTCACGCTGTTGATGGTGCAAATAGTCGACTAGAGGCAGGCATAAATTGTGAAAAATGCGAGAACCCTTGTTCCAAAACACGTCCGGAAGATTGTATCCATTCCTGTCCAAAGCCATGTCATCCAGGAAACTGCCATCCATGTAAACAAATGCTAAGGATTAAATGTCACTGTGGCTTGACACAACCTTACATAGCATGCAGTGATTGGTTAACTTTGGAGAAGCGGGAGGAGTTACAAAGTTGTGGAAATCaatgtcctaaaaatTATTCCTGCGGCCACCGCTGCAAAGCTAACTGCCATTCCGGAGATTGCCCCAATCCAGAATCctgcaagaaaaaaatgaaagttCCTTGCAAATGCAAACGTATCAAAAAAGAATTTCAGTGCGAAACGATCCGCAAAGGTTTAGCAATTGTTGAGTGTGACGACGTTTGCAAACAAAAACAGGAAGAAGAGAGAAAACAACGCGAAGCTGAAAacgaaataagaaaaaaagaggAAGAGATAAGGAATCAAAAGGAATTGGAGCAGTATCAGAAGAAATTTTCGGGCAAAAAGAAAGGGAGAGATAGAAGGGTTTATGATGAGACTGAAGAAACtacttttgttaagaaatataGGATGGCATTGGTGTCTGGATTCCTAATCGTAACGTCAGTAGTCGTATATCAAGCACTTAGTTAtgcgtaa
- Protein Sequence
- MSNSRPKSNPWNKNNPQRPKKSPQNPVKGPPLSSTSESKFKAAQAKLQSSVKKHIKDYESSSEEEDLDSANLIEVILKEYTQGGGTNDQVVRTKTFIEESFLSGVNTCLICISRVKRDDQIWGCLSCYGVFHLDCIQRWSKDTVMQQKQRLEDQTTTSGKKLYWCCPKCRFEYFPEQYPTKYVCFCGKKENPQYQPFLVPHSCGEICRKALLPPCGHNCLLLCHPGPCPPCPVTVSISCYCGSQQPTTKRCSNRGWSCGNKCGKLLSCEKHTCSDPCHAGECQPCSKKSIQKCMCGRQQKLRDCATPNWQCEKVCGKPLDCGNHKCQEVCHAGVCDSCPLVRPRTCPCGKTKYQLPCTEDTPTCPDTCGKLLECGIHPCNFRCHKDKCGLCLEVVTKSCRCGQHSKEIQCCKQYLCETKCKRIRDCNKHPCNRKCCDENCPPCEKPCGHTLQCGNHKCPSVCHRGPCYPCQQTNEVSCRCGATKITVPCGRKHKVKPPKCSKLCLIPPDCHHEKRENHKCHFGDCPSCKQICNKSRANCEHFCSAPCHSSVLVKIEAQKASMPWEQSAPLVEKRKLPCPDCKVPVKVTCLGDHEMADWPCYMAKPSSCGRPCGRVLNCTNHTCSLPCHAVDGANSRLEAGINCEKCENPCSKTRPEDCIHSCPKPCHPGNCHPCKQMLRIKCHCGLTQPYIACSDWLTLEKREELQSCGNQCPKNYSCGHRCKANCHSGDCPNPESCKKKMKVPCKCKRIKKEFQCETIRKGLAIVECDDVCKQKQEEERKQREAENEIRKKEEEIRNQKELEQYQKKFSGKKKGRDRRVYDETEETTFVKKYRMALVSGFLIVTSVVVYQALSYA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01244905; iTF_01241520; iTF_00197054;
- 90% Identity
- -
- 80% Identity
- -