Bpel030299.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- nfxl1
- Assembly
- GCA_963991005.1
- Location
- OZ022562.1:19018689-19025184[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 4.7e+04 -7.8 5.6 15 19 169 173 168 173 0.81 2 18 0.13 3.1e+03 -0.3 0.4 4 10 204 210 203 210 0.95 3 18 3e-08 0.00071 20.9 17.0 1 19 218 235 218 235 0.99 4 18 1.2e-08 0.00028 22.2 14.6 1 19 271 289 271 289 0.97 5 18 0.3 7e+03 -1.5 0.7 6 10 314 318 313 319 0.91 6 18 5.2e-09 0.00012 23.3 9.8 1 19 324 342 324 342 0.98 7 18 1.3 3e+04 -3.5 1.0 5 10 366 371 366 371 0.86 8 18 0.00032 7.5 8.0 9.2 1 18 377 394 377 395 0.96 9 18 0.3 7e+03 -1.5 0.5 1 4 404 407 404 408 0.89 10 18 0.0016 38 5.8 15.0 1 18 429 446 429 447 0.94 11 18 9.4e-10 2.2e-05 25.7 12.5 1 19 456 474 456 474 0.98 12 18 0.00058 14 7.2 3.9 10 19 523 532 520 532 0.89 13 18 0.1 2.3e+03 0.0 5.8 3 12 543 552 535 552 0.78 14 18 2 4.7e+04 -4.8 3.5 14 19 580 585 580 585 0.86 15 18 0.00019 4.5 8.7 3.1 1 11 621 631 611 635 0.90 16 18 1 2.4e+04 -3.2 0.7 5 10 648 653 648 653 0.84 17 18 1.6e-05 0.37 12.2 20.2 4 19 663 678 661 678 0.94 18 18 1.4e-06 0.033 15.5 12.4 1 18 721 740 721 741 0.89
Sequence Information
- Coding Sequence
- ATGAGTAACAGCAGGCCTAAATCTAATCCTTGGAATAAAAACAAACCTCAGCCCCAGAAACCCAAGAAATCAGCGCAAAGTCCTGTTAAAGCTAAACCGCCATTAGGCTCCACTggtgaattaaaatttaaagaggCCCAAGCAAAGCTACAAAATTCTGTTCAAAAACATATTAAGGACTATGAATCGTCATCTGAAGAAGAAGATTTAGATTCGTCAAATCTTATAGaGGTAATTCTTAAGGAATATACACAAGGAGGGGGAACAAATGATCAAGTTGATCGCACCAAAACATTTATTCAGGAATCTTTTCTGTCAGGTGGCAATACATGCCTAATATGTATTTCTAGAGTTAAAAGAGACGATCAGATATGGAGTTGTTCAAACTGTTATGGAGTTTTCCACTTGGACTGCATTCAAAGATGGTCCAAAGACACTGTTATGCAGCAGAAGCAGAGATTGGAAGATCAAACAATAACCGCCAAAAAACAATTGTGCTGGTGTTGTCCTAAATGCCGATTTGaatatttcccagaacaatatCCAACAAAGTATGTCTGcttctgtggaaaaattgaagatCCTAAGTACCAACCATTTTTGGTGCCACATTCCTGTGGAGAGATATGTAGAAAAGATTTGATTCCTTTTTGTGGTCACAAATGCTTATTACTTTGTCATCCAGGTCCTTGCCCACCATGTCCAGTAACAATCAATGTATCTTGTTATTGTGGCTCACAGCAGCCCACAACTAAGAGATGTAGCCACAGGGGTTGGTCTTGTGATAATCGATGCGATAAGCCCATGTACTGTGGGAAACACACTTGTAGTGACCCATGTCATCCAGGGGAATGTCAGTTATGCTCTAAAAAGAGTATTCAAAAGTGTATGTGTGGAAGACAGCAAAAACTAAGAGACTGTGCTACTCCTGACTGGCAGTGTGAGAAGgtTTGTGGTAAAGCACTAGATTGCGCGAATCACAAATGCGAGGAGGTGTGTCATGCTGGCGTTTGTGATTCGTGCCCGCTAGCTCGTCCCAGAACTTGTCCTTGTGGGAAAACAAAGTATCAGTTGCCGTGTACGGAAGATACACCAACTTGTCCAGACACTTGCGGAAAGACTTTGGAATGCGGAGATCACCCGTGTAACTTTAGATGTCATAAGGATAAATGTGGCTTGTGTTTGGAGATTGTAACTAAATCCTGTCGGTGTGGTCAGCACTCCAAAGAAATACAGTGTTTTAAACAATACCTCTGTGAAACCAAATGCAAGAAAATGAAAGATTGTAATAAACATTCCTGTAATCGCAAATGTTGCGATGAAAACTGTCCACCTTGCGAGAAACCTTGCGGACATACTTTACAGTGTGGCAATCACAAGTGTCCGTCGGTTTGTCATCGGGGACTGTGTTATCCGTGTCAACATACCAACGAGGTGTCTTGCAGATGTGGAGCTACCAAAATTACAGTTCCTTGTGGTCGGAAGTATATGGTGAAGCCACCTAAGTGTTCTACGTTGTGTtcAATACCTCCGGATTGTCACCATGAAAAACGTCTCAACCACAGATGCCACTTCGGCGACTGTCCGGCGTGCAAACAAATTTGCGGCAAGTCTAGGCCCGATTGTCAACATTTATGTTCGGCATCATGTCATTCGTCTGTACTTGTAAAAATAGAAGCTCAAAAAGCATCGATGCCTTGGGAACAGAGCGCACCTCTCGTGGAAAAAAGGAGTTTACCATGTCCTGATTGTAAAGTTCCTGTCCAAGTGACGTGTTTAGGTGATCATGAAACAGCAGATTGGCCCTGCTATATGGCAAAACCATCGAGTTGTGGTAGACCATGCGGTAGAGTGTTAAATTGTACCAACCATACTTGTTTATTACCATGTCATGCTGTTGAGGGTGCAAGTAATAATTTGGAGGCTGGTTCAAACTGCGAAAAATGCGACAACCCTTGTGCTAAACCGCGCCCAGATGGTTGCCCGCATACCTGTCCGAAGCCATGCCATCCAGGGACCTGCCCGCCATGTAAACAAATGCTCAGGATTAAATGTCACTGCGGCCTTACTCAGCCTTACATATCTTGCAGCGATTGGCTAAATTTAGAAAAGAGGGAGGAGCTACAAAGTTGTGGAAACCAGTGTCCTAAAAATtatgttTGCGGGCACCGCTGCAAAGCTAACTGCCATTCCGGCGATTGTCCCAATCCAGAATCGTGCAAGAAAAAGATGAAAGTTGCATGCAAATGCAAACGCCTAAAAAAGGAATTCCAATGCGAAACGATCCGCAAAGGATTAGCAATTGTGGAATGTGACGATGTTTGCGTACAAAAGCAGGAAGAGGAAAGAAAACAACGCGAAGCTGAAAACGAAATCAGAAAGAAAGAGGAAGAGATAAGAAATCAGAGGGAGTTGGACCTGTACCAAAAGAAGTTTGCTggcaaaaagaaaaacaaagatAGAAGGGTTTACGATGAGAGTGAGGAAACTACTTTCGTTAAGAAATACTGGTTGGTGTTAGTGTCAGGGTTTCTATTTGTTACTTCAGTAGTCATGTACCAAGCCCTTACTAATGTTTAA
- Protein Sequence
- MSNSRPKSNPWNKNKPQPQKPKKSAQSPVKAKPPLGSTGELKFKEAQAKLQNSVQKHIKDYESSSEEEDLDSSNLIEVILKEYTQGGGTNDQVDRTKTFIQESFLSGGNTCLICISRVKRDDQIWSCSNCYGVFHLDCIQRWSKDTVMQQKQRLEDQTITAKKQLCWCCPKCRFEYFPEQYPTKYVCFCGKIEDPKYQPFLVPHSCGEICRKDLIPFCGHKCLLLCHPGPCPPCPVTINVSCYCGSQQPTTKRCSHRGWSCDNRCDKPMYCGKHTCSDPCHPGECQLCSKKSIQKCMCGRQQKLRDCATPDWQCEKVCGKALDCANHKCEEVCHAGVCDSCPLARPRTCPCGKTKYQLPCTEDTPTCPDTCGKTLECGDHPCNFRCHKDKCGLCLEIVTKSCRCGQHSKEIQCFKQYLCETKCKKMKDCNKHSCNRKCCDENCPPCEKPCGHTLQCGNHKCPSVCHRGLCYPCQHTNEVSCRCGATKITVPCGRKYMVKPPKCSTLCSIPPDCHHEKRLNHRCHFGDCPACKQICGKSRPDCQHLCSASCHSSVLVKIEAQKASMPWEQSAPLVEKRSLPCPDCKVPVQVTCLGDHETADWPCYMAKPSSCGRPCGRVLNCTNHTCLLPCHAVEGASNNLEAGSNCEKCDNPCAKPRPDGCPHTCPKPCHPGTCPPCKQMLRIKCHCGLTQPYISCSDWLNLEKREELQSCGNQCPKNYVCGHRCKANCHSGDCPNPESCKKKMKVACKCKRLKKEFQCETIRKGLAIVECDDVCVQKQEEERKQREAENEIRKKEEEIRNQRELDLYQKKFAGKKKNKDRRVYDESEETTFVKKYWLVLVSGFLFVTSVVMYQALTNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189057;
- 90% Identity
- -
- 80% Identity
- -