Ppte051471.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_963969555.1
- Location
- OZ018380.1:18961729-18972539[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 8.3e+04 -7.8 5.6 15 19 169 173 168 173 0.81 2 17 0.13 5.4e+03 -0.3 0.4 4 10 204 210 203 210 0.95 3 17 3e-08 0.0013 20.9 17.0 1 19 218 235 218 235 0.99 4 17 3.6e-06 0.15 14.2 18.9 1 19 271 289 261 289 0.88 5 17 0.71 2.9e+04 -2.7 1.9 6 10 314 318 313 318 0.90 6 17 3.7e-09 0.00015 23.8 9.7 1 19 324 342 324 342 0.98 7 17 6.4e-06 0.27 13.4 7.9 1 18 377 394 377 395 0.96 8 17 0.88 3.7e+04 -3.0 2.4 1 5 404 408 404 415 0.85 9 17 0.011 4.7e+02 3.1 16.2 1 18 429 446 429 447 0.94 10 17 9.4e-10 3.9e-05 25.7 12.5 1 19 456 474 456 474 0.98 11 17 0.00028 12 8.2 4.4 10 19 523 532 520 532 0.89 12 17 0.1 4.2e+03 0.0 5.9 3 12 543 552 542 552 0.88 13 17 2 8.3e+04 -4.8 3.5 14 19 580 585 580 585 0.86 14 17 8.8e-05 3.7 9.8 3.9 1 11 621 631 611 635 0.90 15 17 1.8 7.4e+04 -3.9 1.2 5 10 648 653 648 653 0.89 16 17 4.4e-05 1.8 10.8 23.6 3 19 662 678 661 678 0.92 17 17 1.4e-06 0.059 15.5 12.4 1 18 721 740 721 741 0.89
Sequence Information
- Coding Sequence
- ATGAATAACGGCAGGCCTAAATTCAATCCTTGGAATAAAAACAAACCCCAGCCTCAGAAGCCTAAAAAATCGCCACAAAATCCTGTTAAATCTGGACCTCCAGTAAGCTCTACTGGTGAATCAAAATTTAAAGAGGCTCAAGCAAAGCTTCAAAATTCTGTTAAAAAACATATCAAGAACTATGAATCGTCATCTGATGAAGAAGATTTGGATTCCTTAAATCTTATAGAGGTCATTCTTAAAGAATATACTCAAGGAGGAGGAACAAATGATCAAGTTGTACGCACCAAAACATTTATTGAGGAATCTTTTCTGTCAGGTGCAAATACATGTCTTATATGTATTTCTAGAGTTAAAAGAGACGATCAGatatgGAGTTGCTTAAACTGTTATGGAGTTTTCCACTTGGACTGCATTCAAAGATGGTCAAAGGATACAGTAATGCAGCAGAAGCAGAGATTAGAAGATCAGACAGTTAACTACAAAAAACAAGTGTGCTGGTGTTGTCCTAAATGCCGGTTTGAATATGTTCCAGAACAGTACCCGACAAAATATGTCTGCTTTTGTGGAAAACTTGAAAATCCCAAGTTCCAGCCATTCTTGGTGCCACATTCTTGTGGAGAGATATGTAGAAAAGATTTAATTCCTTCTTGTGGACACAAGTGCTTGTTACTTTGTCATCCAGGTCCTTGTCCCCCATGTCCAGTAACAATCAACGTCTCTTGTTATTGTGGGGTAGAGCAGCCCACTACTAAAAGATGCAGCCATAGGGGCTGGTCTTGTGAAAACCGGTGTGGAAAACCCTTATCATGCGAAAAACACACTTGCGGTGACCCCTGTCATCCTGGGGAATGTCAGCCATGCTCCAAAAAGAGCATTCAGAAATGCATGTGTGGAAGACAGCAAAAACTAAGGGACTGTGCTACTCCTGATTGGCAGTGTGAGAAGGTTTGTGGTAAATCCCTTGATTGTGGCAATCACAATTGCAAGGAAGTATGCCACGCGGGCGTTTGCGATTGGTGCCCGCTAGCCCGTCCAAGGACTTGTCCTTGTGGGAAGACCCAGTATCAGTTACCATGCACAGAAGACACACCTACTTGTCTTGATACTTGTGGGAAACCATTAGAATGTGGAGTTCATACATGTAATTTTAGATGTCATAAGGATAAATGTGGTTTGTGCTTGGAAAATGTAACTAAATACTGTAGATGTGGTCAGCATTCCAAGGAAATTCAGTGTTGCAAACAGTACCTCTGCGAAACCAAATGCAAGAAGATGAAAGATTGCAATAAGCACCCCTGTAATCGTAAATGTTGCGATGAAAACTGCCCGCCTTGCGAAAAACCATGTGGACATACTTTACAGTGTGGAAACCACAAGTGCCCATCGGTTTGCCATAGGGGACTGTGTTATCCTTGTCAACAGACAAACGAGGTGTCTTGCAGATGCGGAGCGACCAAAATTACTGTTCCCTGTGGAAGAAAGCATAAGGTGAAGCCACCCAAGTGTTCAATATTGTGTTTAATCCCCCCCGACTGTCACCATGAAAAACGTGACAATCACAGATGCCATTTCGGCGACTGCCCGTCTTGTAAACAAATTTGTAACAAGTTTAGATCAGACTGTGAACATTTATGTACAGCACCATGTCATTCGTCTGTACTTGTAAAAATTGAGGCTCAAAAGGCGTCCATGCCTTGGGAACAAAGTGCCCCTCTGGTAGAGAGAAGAAATTTACCTTGTCCCGATTGCAAAGTTCCTGTTACAGTGACATGTCTAGgtGAACATGAAACAGCAGATTGGCCCTGTTACATGGCAAAATCATCCAGTTGTGGGAGACCATGCGGAAGAATTTTGAACTGTACCAACCACACTTGTTCCTTACCCTGCCACGCTGTAGAGGGCGCCAGTAACAATCTGGAGGCTGGTACAAACTGCGAAAAATGCGAAAACTCTTGTTCTAAACCACGACCAGATGGTTGCACGCACACTTGTCCAAAACCTTGTCATCCAGGGTGCTGTCCGCCATGTAAACAAATGCTTAGAATTAAGTGTCACTGTGGCCTTACCCAGCCTTATATATCTTGCAGCGATTGGTTAGATTTGGAAAAGAGGGAGGAGCTACAAAGTTGCGGAAATCAATGCCCTAAAAATtatgcTTGTGGCCACCGTTGCAAAGCTAACTGTCATTCCGGCGATTGTCCCAATCCAGAATCatgcaagaaaaaaattaaagttctaTGCAAATGTAAACGCTTAAAGAAAGAATTCCAGTGTGAAACAGTACGCAAAGGTCTGGCAGTTGTGGAATGTGACGATGTTTGCATACAAAAGCAGGAAGAGGGGAGAAAACAGCGCGAAGCAGAAAACGCAATAAGAAAGAATGAGGAAGAGATAAGAAATCAGAAAGAGTTGGAGCAATATCAGAAGAAGTTTTCTGGCAAAAAGAAGAACAAAGATAGAAGAATTTATGATGAAAGCGAAGAAACTACTTTCATCAAGAAATACTGGATGGCATTGGTGTCTGGATTTCTGGTTGTGACATCTGTAGTTGTGTATCAAGCTCTCCTCAATGTTTAA
- Protein Sequence
- MNNGRPKFNPWNKNKPQPQKPKKSPQNPVKSGPPVSSTGESKFKEAQAKLQNSVKKHIKNYESSSDEEDLDSLNLIEVILKEYTQGGGTNDQVVRTKTFIEESFLSGANTCLICISRVKRDDQIWSCLNCYGVFHLDCIQRWSKDTVMQQKQRLEDQTVNYKKQVCWCCPKCRFEYVPEQYPTKYVCFCGKLENPKFQPFLVPHSCGEICRKDLIPSCGHKCLLLCHPGPCPPCPVTINVSCYCGVEQPTTKRCSHRGWSCENRCGKPLSCEKHTCGDPCHPGECQPCSKKSIQKCMCGRQQKLRDCATPDWQCEKVCGKSLDCGNHNCKEVCHAGVCDWCPLARPRTCPCGKTQYQLPCTEDTPTCLDTCGKPLECGVHTCNFRCHKDKCGLCLENVTKYCRCGQHSKEIQCCKQYLCETKCKKMKDCNKHPCNRKCCDENCPPCEKPCGHTLQCGNHKCPSVCHRGLCYPCQQTNEVSCRCGATKITVPCGRKHKVKPPKCSILCLIPPDCHHEKRDNHRCHFGDCPSCKQICNKFRSDCEHLCTAPCHSSVLVKIEAQKASMPWEQSAPLVERRNLPCPDCKVPVTVTCLGEHETADWPCYMAKSSSCGRPCGRILNCTNHTCSLPCHAVEGASNNLEAGTNCEKCENSCSKPRPDGCTHTCPKPCHPGCCPPCKQMLRIKCHCGLTQPYISCSDWLDLEKREELQSCGNQCPKNYACGHRCKANCHSGDCPNPESCKKKIKVLCKCKRLKKEFQCETVRKGLAVVECDDVCIQKQEEGRKQREAENAIRKNEEEIRNQKELEQYQKKFSGKKKNKDRRIYDESEETTFIKKYWMALVSGFLVVTSVVVYQALLNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189057;
- 90% Identity
- -
- 80% Identity
- -