Ppla017491.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philopedon plagiatum
Gene Symbol
PAXBP1
Assembly
GCA_963971165.1
Location
OZ020189.1:136055245-136076117[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-30 3.1e-25 91.8 0.2 3 272 498 705 496 707 0.91

Sequence Information

Coding Sequence
ATGTCTCTTTTTaagaaacccaaaaagaatATTGTGCAAAGAAGGGTTTTTACAGAAAATGACGATGAAGATGACTCTGACCCAATGGATTTCCAGGAAATTCCACAATACGGAAAAAAGTCCAAAAagaaagataaagaaaaatcaaagcAAACGTTGCTGAGTTTTGAGACCGAAGAGGAAGGAGAAGTTTTTCAGgtaaaaaaatcgtCCCACCACAAAAAAGTTATGAGAATGTTTGAGAaggaaaagaagaaaaaagacaGGCCCGACAAGGATGAGCCAAAGCCTAAAGAAGAGAAAACGGAAGTTGTAACTGATGACTTGGTTTTAGTAGTTAATTCTAGTTATAAGAAACCCCCGACCCCACCGCCGCCTATTTTAAGTGGAAGAGATGCTCTGTGTGCAGgcaAAGATGATATATCATCCGATGAAGATGAGCCAAGTGCTACAAGGCATAGATTTTCCAGACCAGAAAATGTAAAGAAAGTTTTGGAGTCGGGCGCCATTCCGGATGCCGCCATGATCCATGCCGCAAGAAAAAGAAGACAGCGGGCTCGCGAAATGGGAGATTTCATTCCCGTAGAAGATGAGGAACCTGAAGATACAGGTCGTCTAGTAAGAGACGACGATAACGAAGAAAGCGATGACGAAAGAATCGATATGGAAATTAATTTGGCGAAACGCGATCAAGAACGAAGAAGAGAGCAATTTATGGCAGCTCAAGAGTCAGATCACGAGCTTGATGAATGGGAAGACCAGCAAATCCGAAAGGGAGTAACAGGTGCCGCAATTACTGCTGCTCAAGAGATGTTGGATTACCAATCCGAACAAAATGTTCAGACTCAGGTAAAAACTCAGCCAACAGTTATTGATCCGGATATACCCAGAACCCCAGAAATGATAGCGCAACAACTTcgcgaacattttaaaaatgttattaattcGCGCGAAGAAAATTTAGACAAGTTACGAAAGGTACAGGAAGACATTCAACAGGCCACGAATGAACTGGAAGACTTGAAGATAAGGGCACCAGAAGCTGCGGAGAAGTATAGGTTTTACCAAGAGTTGAGAGGGTATATTACGGATCTAGTGGAGTGCTTGGATGAAAAAATAAGTTCTATATCCACATTGGAACAACGAGCCTTAGACTTGACGTCGTCCAAATCTAAGTGGCGAATTGAAAGAAGGAGACAGGATGTCAGAGATCAAGCTGAAGAAGCGACTGGTAAAGGCCTGCTCAAAAAAGGTCCAGAAGATGAAGATAAAATAAGAAGGGCGGCCGAAAGAGAAGGAAGAAGAACAAGACGCAGAAGAGCAAGAGAGGTGCCTAATTCCCAGAACATGACAAAGCACGTTGAAGGAATGTCAAGCGACGACGAAATGTCGCCACAAGACCTGCTTGTTTTTGACAAAGAACGGCAGGATATCGAACAGGAACTTCAAGAAATTTTCGAGGATGTTGTTGAAGACTACTCATCAATAGCAAATATCCTCATTAGGTTTGAGCATTGGAGAAGTAGGGATATAACTGCTTATAACGAAGCGTACGCTACTTTTTGTTTACCTAAAGTCGTCAGCCCTTTGATTAGATTAAAGTTGATTTTCTGGGACCCTTTAAATGAAACGAGAGAACTAGAAAAAAGCGATTGGTATCGAACTTTGGCTCTATATGGTTTGCACGATGATGAATCGGAAAGTAGTCTTGCAAGAGACCCAGATATCAACCTGTTACCGTCCATCATAGAGAAATTACTGGTTCCTAAATTAACCAAACTAGTTGACAGCTGTTGGGACCCGCTTTCTAGTTCGCAAACATTAAGATTAGTAGGCACTGTTGGTAGACTTATAAGGAAATACCCCACTTTGGGTCCAGAAAGTAAAAACTTGATTAACCTGTTCAATGCGATTTTACATAAAATGAAGACAGCTCTTGATAACGACGTGTTTATTCCAATTACACCAAAGATAGCTGACAGCAAAAATCAGTTCTTTCAAAGACAGTTTGCAAGTGGGcttaaactacttaaaaatataacaagttGGCAAGGGATTATTAACGATAGCAAAATTAAAGAACTGGCGTTAAATTCCTTGCTTAACCGGTACCTTCTTAGCGCTTTAAAATTTTGTGCACTCACGGATGCCGCAcaaaaaattaggttaattagtCAGGTACTGCCAAGAATTTGGTTGCAGGAAAGTACTCCTGAAttcaaaatgtttagtttgacGATTGATAATTTGCAACAGCAGCTCGATAGGAATAACCCATTGCATTTGGAATCCATCgatattttaaatggcattacCAAAACGTTAAGGTCTGTACATAAGTAG
Protein Sequence
MSLFKKPKKNIVQRRVFTENDDEDDSDPMDFQEIPQYGKKSKKKDKEKSKQTLLSFETEEEGEVFQVKKSSHHKKVMRMFEKEKKKKDRPDKDEPKPKEEKTEVVTDDLVLVVNSSYKKPPTPPPPILSGRDALCAGKDDISSDEDEPSATRHRFSRPENVKKVLESGAIPDAAMIHAARKRRQRAREMGDFIPVEDEEPEDTGRLVRDDDNEESDDERIDMEINLAKRDQERRREQFMAAQESDHELDEWEDQQIRKGVTGAAITAAQEMLDYQSEQNVQTQVKTQPTVIDPDIPRTPEMIAQQLREHFKNVINSREENLDKLRKVQEDIQQATNELEDLKIRAPEAAEKYRFYQELRGYITDLVECLDEKISSISTLEQRALDLTSSKSKWRIERRRQDVRDQAEEATGKGLLKKGPEDEDKIRRAAEREGRRTRRRRAREVPNSQNMTKHVEGMSSDDEMSPQDLLVFDKERQDIEQELQEIFEDVVEDYSSIANILIRFEHWRSRDITAYNEAYATFCLPKVVSPLIRLKLIFWDPLNETRELEKSDWYRTLALYGLHDDESESSLARDPDINLLPSIIEKLLVPKLTKLVDSCWDPLSSSQTLRLVGTVGRLIRKYPTLGPESKNLINLFNAILHKMKTALDNDVFIPITPKIADSKNQFFQRQFASGLKLLKNITSWQGIINDSKIKELALNSLLNRYLLSALKFCALTDAAQKIRLISQVLPRIWLQESTPEFKMFSLTIDNLQQQLDRNNPLHLESIDILNGITKTLRSVHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00196225; iTF_00376337; iTF_01351719; iTF_00847664; iTF_00444130; iTF_01240681; iTF_01243671; iTF_00431455; iTF_01307259;
90% Identity
iTF_00444130;
80% Identity
-