Ppla000533.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- Tfdp1
- Assembly
- GCA_963971165.1
- Location
- CAXARB010000032.1:55786-64638[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-23 1.7e-18 68.5 0.2 3 65 167 247 165 247 0.97
Sequence Information
- Coding Sequence
- ATGCTAATAAGtagaaatataataattaacgAGTGGACAGAATATTCTGCTGAAGCAATAGGTTTGGATACAAAGAGGACAAAAATTACCAACCACTCGAACAGATCTACTGCAgccTATGCTACCTCAATAGCTCAACAGCAGCAGATCATAAGGACCTTAACGACAAATCCGAAAATTGTAACAAAACAAGTGCCTATACATGTAGGTACGTCTGTCAATAACATCCCCAAAGGTACAAAGACAATTAGACTCACGCAAGCTCAAATGcaaaatataaaattcgttCAACAAAACCAACAAAGAGTGATGCCTATACCACAAAGTCCAACTTCGCAAGCAATACCTGTCATCCAACAATCATCAATGCACCAATATCAGCCtcaagtaattaaaaatatctctCCACCGATTTTGTCAAGGAAAAGGGCAGATTCGGTCGATCAAGTTGATTTTGCACCAGATAACAAACGATTACGAAAATCAGAAAAGCTCAGTAGAGGTCTGAGGCACTTTTCCATGAAAGTTTGCGAAAAAGTCAAGGAAAAAGTGACAACGACCTACAATGAAGTCGCCGACGACCTCGTGAGGGAATTTACGGCCCAACAAAGTACCGCCAATAGTCCGTTGGCCGATCAGTACGACCAAAAGAACATACGGAGGCGTGTCTATGATGCGCTCAATGTTCTTATGGCCATGAACATTATTTCTAAGGAAAAGAAGGAAATTCGGTGGATTGGATTGCCGACAAATTCGTTGCAgGAGTGTCAGCAATTGGAAAAGGAAGTCCACAGAAAAACGACCAGCATCCgagaaaaagaaaaacagtTTTACGAACTGATAATGAGCCAAATAGCCTTCAAAAGTCTTGCTCAAAGGAACAAAGAAGCCGAAAAGCTGCACGGTCCGCCGGGACCAAATTCGTATATTCAACTGCCGTTCATTGTTGTCAATACAAATAAAAAGACTGTTATTAATTGTAGCATCTCAAATGACAAgaCAGAATACGTATTTCAATTTAGTGACAAGTTTGAAATTAGTGAcgatcttgaaattttaaagcaaattggAATGTTACATGGACTGGATAATGGAAAGTGTTCTAAAGAAGACCTGGAAAGGATTAAAATGCTTATTCCAGAATCATTATGGCCATACGTAGAAAAACTAGCAACGGGTTCCAAAGACCCCCTAGAGGAAATCCTGGAATCCACAAGTGCCAGCACCTCCTCGATGCCTCACATCTCAGATTTTGTCGAGGCCACCTTGGAGGAGGATAATTCTCGTCAGTCGAGTAGCAACGATCCGATGTCGCCAATCGCAGCGGACTATTCGGACGACGAAGCCGATTCTGATTTGTCCAGTGATGAGTTAAATTAA
- Protein Sequence
- MLISRNIIINEWTEYSAEAIGLDTKRTKITNHSNRSTAAYATSIAQQQQIIRTLTTNPKIVTKQVPIHVGTSVNNIPKGTKTIRLTQAQMQNIKFVQQNQQRVMPIPQSPTSQAIPVIQQSSMHQYQPQVIKNISPPILSRKRADSVDQVDFAPDNKRLRKSEKLSRGLRHFSMKVCEKVKEKVTTTYNEVADDLVREFTAQQSTANSPLADQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSLQECQQLEKEVHRKTTSIREKEKQFYELIMSQIAFKSLAQRNKEAEKLHGPPGPNSYIQLPFIVVNTNKKTVINCSISNDKTEYVFQFSDKFEISDDLEILKQIGMLHGLDNGKCSKEDLERIKMLIPESLWPYVEKLATGSKDPLEEILESTSASTSSMPHISDFVEATLEEDNSRQSSSNDPMSPIAADYSDDEADSDLSSDELN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376048;
- 90% Identity
- iTF_01239905; iTF_00195749; iTF_01238357; iTF_01241621; iTF_01186811;
- 80% Identity
- -