Pspi024036.1
Basic Information
- Insect
- Philonthus spinipes
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963082785.1
- Location
- OY720310.1:4420140-4429374[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-107 1.3e-102 344.5 30.3 1 300 28 320 28 320 0.94 2 2 0.009 4.1e+02 1.4 4.3 120 171 318 369 318 380 0.85
Sequence Information
- Coding Sequence
- ATGGACAGCGGCGGCGGACGTCGACGCGTCGTCGCCAAGTCTTCGGCGGAAGACCAGGCGCTAGATCTCATCGCCAAGGAGgcGGAGGCTCGCCTTTTGGCGAAAAGGGCGGCCAGAGCGGAGGCGCGCGAGATCAGGATGCGCGACCTGGAGAGGCAGCAGCGCGAACAGGAGGAAAACGCCGACAGGCAGTTCGACATGCTGGCCGAGCCGATGATCAGGAGACCCCCGAGCACTTCCAGGTACCTGTCCAGCAGACGGTCCTCCGAAGACTCCCTGGAGGACACCGGCAGCCTGCGGGATCTTAGGCATGAGCTCAAGGAGGTCGAGGAGAAGTTCAGGAAGGCGATGATTGCCAACGCCCAGCTGGACAATGACAAAGCCGCCCAGACCTACCAGCTCGAACTACTGAAAGACAGgtTAGAGGAATTAGAAGAAGACAATTCGCAATTGAAGCGAGAACACAGGGAAAAATGCAGGGATTTCGAACAGCTGAAACGGGTGACTTGTAAACTTAAGGAGGATCTGGCCTTCATGAAAGCAGAACTGGAAGAGAGGGACCGACTGATAACGGAAAAAGGTTTAGTTATAGTAGGCGAGGAGGAGCCCATCTGTGAGGAAAACGGAGAATCGTCTTCTGCGGAGGCGAATGGACCTACGAGAATCCGAAGAGCGCTTGTCTGTGCTGAAAATGCCCACCTGTTAGAAAACGCCGGAGAAGGAAGTTTagATGTTCGATTAGCAAGGTTTGCTAAAGAGAGGGGAGAACTTCAGGACCAAATTAGTCATTTAAAATTAGAACTCGAGGAGGAGAGGAACCAACGGAGGAAACATCCTGGAGGCTCTGCAGTCAATGGACCTGACTCGGAATACGATGCTGCAGATATACAAAgagAAGCGAGCAAACAATTAGCCGAGTTCAAGTTCAGAGCGCAGAAGGCCGAACAGGATGTGGCAACGTTACAAGCGACGGTCGCCCGTCTCGAGAGCCAAGTGATCAGGTACAAATCTGCTGCAGAAATATCAGAAAAGTCCGAGGAGGCTCTTAAGGTGGAGAAAAGGAAACTGCAAAGAGAGgcTCGGGAAGCACAGAATAGGGCGGAGGAACTGGAAATGTCGAACACGCATCTGATAAAACGGCTGGACAAGCTGAAGAACGCCAAGTCGGCCCTACTTAAAGAACTTTGA
- Protein Sequence
- MDSGGGRRRVVAKSSAEDQALDLIAKEAEARLLAKRAARAEAREIRMRDLERQQREQEENADRQFDMLAEPMIRRPPSTSRYLSSRRSSEDSLEDTGSLRDLRHELKEVEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEDNSQLKREHREKCRDFEQLKRVTCKLKEDLAFMKAELEERDRLITEKGLVIVGEEEPICEENGESSSAEANGPTRIRRALVCAENAHLLENAGEGSLDVRLARFAKERGELQDQISHLKLELEEERNQRRKHPGGSAVNGPDSEYDAADIQREASKQLAEFKFRAQKAEQDVATLQATVARLESQVIRYKSAAEISEKSEEALKVEKRKLQREAREAQNRAEELEMSNTHLIKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096637;
- 90% Identity
- iTF_01096637;
- 80% Identity
- -