Basic Information

Insect: Pheosia tremula
Gene Symbol: -
Assembly: GCA_905333125.1
Location: HG995397.1:8647258-8653584[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.1 1.9e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 20 0.013 0.76 10.5 0.9 1 23 84 107 84 107 0.97

3 20 0.00075 0.045 14.3 0.8 2 23 213 234 212 234 0.97

4 20 2.1 1.2e+02 3.5 1.4 1 23 240 262 240 263 0.94

5 20 0.2 12 6.7 3.4 2 22 509 529 508 529 0.95

6 20 0.085 5.1 7.9 2.6 1 23 627 649 627 649 0.95

7 20 0.59 35 5.2 0.3 2 23 784 805 783 805 0.96

8 20 0.024 1.5 9.6 0.8 2 23 881 902 880 902 0.96

9 20 0.024 1.4 9.6 0.9 1 23 910 932 910 932 0.97

10 20 0.12 7.3 7.4 3.4 1 23 971 993 971 993 0.95

11 20 0.00024 0.014 15.9 4.0 1 23 1001 1023 1001 1023 0.99

12 20 0.0061 0.36 11.5 0.9 1 23 1106 1128 1106 1128 0.98

13 20 1.5 92 3.9 1.5 1 23 1184 1206 1184 1206 0.94

14 20 7.3 4.4e+02 1.8 0.0 2 23 1213 1234 1213 1234 0.92

15 20 0.035 2.1 9.1 0.8 1 23 1295 1317 1295 1317 0.93

16 20 0.01 0.6 10.8 1.0 1 23 1323 1345 1323 1345 0.96

17 20 0.0067 0.4 11.4 2.6 1 23 1435 1457 1435 1457 0.97

18 20 0.00017 0.01 16.4 1.4 1 23 1463 1485 1463 1485 0.99

19 20 0.83 49 4.8 2.7 1 23 1577 1599 1577 1599 0.96

20 20 0.0028 0.17 12.6 3.7 1 23 1610 1632 1610 1632 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.1	1.9e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	20	0.013	0.76	10.5	0.9	1	23	84	107	84	107	0.97
3	20	0.00075	0.045	14.3	0.8	2	23	213	234	212	234	0.97
4	20	2.1	1.2e+02	3.5	1.4	1	23	240	262	240	263	0.94
5	20	0.2	12	6.7	3.4	2	22	509	529	508	529	0.95
6	20	0.085	5.1	7.9	2.6	1	23	627	649	627	649	0.95
7	20	0.59	35	5.2	0.3	2	23	784	805	783	805	0.96
8	20	0.024	1.5	9.6	0.8	2	23	881	902	880	902	0.96
9	20	0.024	1.4	9.6	0.9	1	23	910	932	910	932	0.97
10	20	0.12	7.3	7.4	3.4	1	23	971	993	971	993	0.95
11	20	0.00024	0.014	15.9	4.0	1	23	1001	1023	1001	1023	0.99
12	20	0.0061	0.36	11.5	0.9	1	23	1106	1128	1106	1128	0.98
13	20	1.5	92	3.9	1.5	1	23	1184	1206	1184	1206	0.94
14	20	7.3	4.4e+02	1.8	0.0	2	23	1213	1234	1213	1234	0.92
15	20	0.035	2.1	9.1	0.8	1	23	1295	1317	1295	1317	0.93
16	20	0.01	0.6	10.8	1.0	1	23	1323	1345	1323	1345	0.96
17	20	0.0067	0.4	11.4	2.6	1	23	1435	1457	1435	1457	0.97
18	20	0.00017	0.01	16.4	1.4	1	23	1463	1485	1463	1485	0.99
19	20	0.83	49	4.8	2.7	1	23	1577	1599	1577	1599	0.96
20	20	0.0028	0.17	12.6	3.7	1	23	1610	1632	1610	1632	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAAATGTCCTCGCCGCCGAGTGCGCAAATCGGCGAGGTCGCTACACTGGTGCGCCAACTCGACGGCCGCCTCTGCGGCGACGCGTCTTCGGAGGCCTCCTCCGATGCCGCAGACGATGCAGAGTTGCCGCAGTGCAAAATAAGAAGAAACTACAACTGCACCAAGTGCACATTCTATACGCAAAACCCGCGCGCGTATCTCGTCCATACGCGCGACGCTCACTTCGTGAGGCTAAAGATTTATGACTGTCCACAGTGCGTATACGCCTCGAAAAATCATCAAAAGCTTGTGCGACACATAAAAATGATTCACTGCGCTAAGAAGAAAGTGGATTCGGAGATAGCTCCTCCGGCTTATGAGACAACGGATCAATTGGAACGAATAGAAGATCTCCTAGAGGAAGTCGAGGATGAAGACATGCCGATGGATGTCGACGACGAGGTCGACGATCTGTCAGAGCGCCCAGAAGATACCGATATGGAAAGTGAAAGAAGTATGGAGCAAGCCACCTCATCGGAGTTACTGAAGTCTAAAAGCAAATTTTTCTCGTGCGACAAGTGCACCTACGTGACCCATATAAGAGCCAGGTTCACAAAACACGTCAAGTATCACTCGATGCCGATGATCAAGTGCACTATCTGCGATTTTCGAACGCCGTACAAGTGGAATCTAGACCGACACATGAAAAACCACGGCGGCAATGGTAGCTTCAACTGCTCCATGTGCAACTTTACGGCGGACATCAAGCAGAGTTTAACAGTGCACGAAATGAATCATCACACGCCGCCCGCTGGCCAATCGCTGGCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACCGTGACCGCGGACGGCGACGCGGCGATGCGCGCCGCTCTGCTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGTCCTCACATTCAGCCTCGGACATGGGTTTGCCGTACACAGAGAAAGATTATGTCAGTTGCAAAAGCGATTCTAATGACGCTACCACATCTGAAGCCACTGCCAAGAAAGATAGCTCGCAATTGGCACAAGAAATACATAGTCCATATTCGCCTAACTCTAACACTGACGATATAAAGGAACATAAACAAAATAGAAAAATTCCAAGACCAATTCCACAACTCATACCATTAAATACTTCAACTCCTAATCAAAAACAAACAGCGGTTGGTGAACCACCACAAAAGAAGTTTAAAGAATCGACAGTCGGAGATGAAAACTCAAGAAGTAAAATGGACAGTTTACTTGGAGATATAACGTTGATACCCGTCAACAATAACCTAACGGTAAAGGAGAATATTGTACGAAAGAAAAACGAATCATTCTTTGATAGATTAAAAGAAAGACTGCTCACGGAGACAGGGGAGAATGGTTCTCTTACATGCAAGAACTGTGGGTTCGAAAGTAAATGTCTATCTGAACATTCCGTACACGAGAAAAATTGCACGCCACAAACAAATCGAATAGCTACAAACACCTCGCTCTCCAGCCTGAGCTCAACACGGTGCCAAAATTGTAGACATAGATGCAAGTCCAGTGCTGACCTATATATTCACATGCAAACATGCAGAAAGGGTAAATACTTTGAGAAAGACGATACTAACACGAAAAATGAAAATAGCAGTGGCGCAACCACGTCAAATAATGAAAAAGACATTGAACCGCATCCGATGGAAAACGTCGTCTTTGTTTGGAACAACTTCAATCATGAGTCGAGCAAGTTTGATATACCACTAGACATAAACATAAACAATGATTCCACTCTCCCAGATATAAACTGTGGGTATGATATCCAGGCCGTTGATGAAAACGAAACCATGAACTTGTCACCGAGTCAAGCTATCGGAAGAAAAGTTTTTAAATGTCCACATTGTCCATTTTTCTCAACAACTGCATCCAGATTCCACGTACATATCGTAGGTCACCTGAATAAGAAGCCCTTTGAATGTTCTTTGTGCAAATACAAATCTAATTGGCGATGGGACATTACAAAACATATTAAATTGAAATCTGCCAGAGACCCAGAACACAATGAAGCAAAAGTGCTCATGACCGATGAGACCGGAAGGCGAAATTATAGCAAGTACAACAAATTTTTAGCAATGCCAATTTTAAATGAACATGGGGAAAACGAGTTCCACTATATAGAGCCGAATGCTTCCGCCGATGGCTCGATGGAAGTGGATGATTCATTCAATGATATGTCAGACACTATGAACATGCCATTTGAAATACAACCGCTCAACCTGCAAACTCAACACAATTTTGATAAGTACGATATAATGGATAGAAGTATTGACATAAAAAAACCCAAGAAAACATTATGGAAGTGTAAAAAATGTAATTACAAGGACCCTTCGAAAGAGGCTCTCTTAGAGCATGTACGCGAACACTCTAGGTCAGAAGGCAGTCAGGAGGACAAGATCCACAACGCCAAGAAACCCGATAATACACCGGATCCAGCTGATTTAGCATACCGATGCGGACACTGCAATCAATTATCCAATTGGAAACATGTTATACAGAGGCACTGCCGTTTGAAGCACGATGGAATCATAAAAGTTATAACCACAGTTAAACCAAAACCTGATTCATTGGCCAATGAAATTACAAACGATACGTGTAACAAGTGTCCGTTTAAATCGAGCGACAAGAAAGTTCTGCAAGCGCATTTACAACAACATCAGCCATCACCGCAATCCGTTTTCAAATGTTACTTCTGCCCGTACTTCGTTAAGGATGAACAAGAATTGACGCAACATCTTCTGCTACACGGTATAACTGACCCTGAAGACTACATCGGTAAAGCGATAGGATGCAAATCTCCACCGTTGGAATTGCCAGGACCAGCCACTCCGTTGAGTACGTCAACTACAGCAACCAAGCGTCACAAATGCACAGAATGTCCATATGAAACGAACAGCAAATCTCAGTACATGTATCATGAACAATTCCATAGATTACCAGCAGACACGCCTTATAAATGCCCCGAATGTAATTACAGTGTATCAAAGAGGCACCTGCTTCATCAACATTTACGAGTTCACGGAATTACAAAAAGAATCGAAACTGAGGCAGAATTAGAAGCATCAGCGTCGTTACACAACAAAACAGACGTTAAAATTGAAGACCAATTTAACCTGGAGGAGATACCGTATGTATGGGTTTCTGCAAAAAATGAATTTCACAAAATGTTTAAATGTCGTTACTGTTCATACGTAAATTCTCAAAAATGTAAAATTCCCAATCATGAAAAAATCCACTGCGTCGTATTCGAGAATGAAACGACCATTTACAAATGTTTGGAATGCAAATACACATACGATACCGCCAATAAATTAGCCGAGCATTCCAAAATGCATGGTGAAATTTACGGTCGAATATATTGCCCTGTCGATGAAGATATCCCAGATGATGAACAAATTTCTAAATTACGAAAAGTTATAGAAACTGAAAAATGTAGTAATACAGAAACTATAAAACAAGAAGATGGTTCAGTGAACGAAAGCAGAGAGATAAAAACATTACACTTTTGTCAGAAATGTCCCGGAAGATTTTTCGAGGAGAATGAATTACAGGAACATGAAAAGCTTCACTGCTTAATATTTATAAATAGATGTCAGTATTGTGAATTTTCTGTTGAAGAAGAAGATGAATTAATTGGGCATAATCTTATTCACAATGACGAATATCACACTAAAACCAAGATGCTTAAATTTATTCATAACACACACCCATCTTACAAAGAGCCTCGGTTGGAACCTATACGTATTCACCCATCGACTTCAGAAACAATATGGATAGTAGCGAGTAAGCCTGAAAACATTGAAGGGACTACGAAGAAACACGTTCCAAAACAATATTATTGCAAGCAATGCCCGGCTAAATTCTTCAAAAGCTCTGCACTTAGTTACCACGTGGGATTACACGGTGGAGAAGGTGAACATAAATGCAAGAAATGCAACTATGCTGTAAAGAACGGTGGAAACTTAGCGAAACATGAATTGTTACACGAGACTGAAAGTAAGGTATCAAATTGTGACTACGACTCTGGTGAAGACATGGATTACAAAAATATTCCTTTGTCAGGAACGGATTTGTTCCAAAGAAAGACTGAAGCTCAGAAAAGAGTGTTAACCGATAAAGATAAACTAGTTAAGCCAAACGATCATTTCCCGCCTGTCCTCCAGGCAGATCCACAGTTTGGTTATCTGATGCACGGCAACCCCGAATTCATTTACCCCACTTACTTAAAAAACGGACGCCAGAAAGAAAAGCGTTACAAATGCCACAAATGTCCGTCTGCATTTGAGAAAAGAGAACAATATAAAATACATTTATCATTGCATGGTTCCAAACAACGATATAAATGCGAGTTATGCGATTATTCTGTTAAATATTACGCTAACTACGTGCAGCATATGAGGAAACATCAAATGAATGACGAAGCGCAAGCAGAAAGGAAGAAAGATAACGACGGATTTGCAGAATTAGAAGGTCAAGAAAATATTAAACAAGAAGACAGTAGTGATAATATCAAACTGGCAATCAAAACTATGCCAAAAGGAGTGCCTCGAAGCGATTTCCAACAGTTCTCAATCAGCGACCAACAAACGCTTAGATTGTTGCAACGAAGGCGGTCAATGAATAATTCAGCTAAGGAAACCGGTAATTGTGAAAATTCACCGACAAAGGAGCGCAAGTTACACATGTGTTTATTGTGCCCCTATACAAATCAACGTCAAGATTCCTTGAGTAATCACTACAGAAGACATGGCGAAGCAGACGCCTTGAACGCAGCAAACCACAAATGCTCGTACTGTGACCTTGTGGTTGTGCAGTCACACTTCCTGCGAGAACATTTAAAGACACATTTTAGTTATCACAAAACCCTGACCCCCGAATGTTTCGTGGCCAACAACGACGTAAGCTTTACAATAACGAAATTGAACGAAGATAGTGAGTCAGTTGATCTCAAACTAGATGTGCGTAAGAGTTTAGTGTGCAATGATGACAAAATATTCGTAAATATTAAGACGGGCGAACTATTGGTGGAATAG
Protein Sequence: MLQQMSSPPSAQIGEVATLVRQLDGRLCGDASSEASSDAADDAELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPQCVYASKNHQKLVRHIKMIHCAKKKVDSEIAPPAYETTDQLERIEDLLEEVEDEDMPMDVDDEVDDLSERPEDTDMESERSMEQATSSELLKSKSKFFSCDKCTYVTHIRARFTKHVKYHSMPMIKCTICDFRTPYKWNLDRHMKNHGGNGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLASRRRNRVGASDTVTADGDAAMRAALLPKEEEGSGDSSSHSASDMGLPYTEKDYVSCKSDSNDATTSEATAKKDSSQLAQEIHSPYSPNSNTDDIKEHKQNRKIPRPIPQLIPLNTSTPNQKQTAVGEPPQKKFKESTVGDENSRSKMDSLLGDITLIPVNNNLTVKENIVRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCTPQTNRIATNTSLSSLSSTRCQNCRHRCKSSADLYIHMQTCRKGKYFEKDDTNTKNENSSGATTSNNEKDIEPHPMENVVFVWNNFNHESSKFDIPLDININNDSTLPDINCGYDIQAVDENETMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPILNEHGENEFHYIEPNASADGSMEVDDSFNDMSDTMNMPFEIQPLNLQTQHNFDKYDIMDRSIDIKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRSEGSQEDKIHNAKKPDNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDSLANEITNDTCNKCPFKSSDKKVLQAHLQQHQPSPQSVFKCYFCPYFVKDEQELTQHLLLHGITDPEDYIGKAIGCKSPPLELPGPATPLSTSTTATKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGITKRIETEAELEASASLHNKTDVKIEDQFNLEEIPYVWVSAKNEFHKMFKCRYCSYVNSQKCKIPNHEKIHCVVFENETTIYKCLECKYTYDTANKLAEHSKMHGEIYGRIYCPVDEDIPDDEQISKLRKVIETEKCSNTETIKQEDGSVNESREIKTLHFCQKCPGRFFEENELQEHEKLHCLIFINRCQYCEFSVEEEDELIGHNLIHNDEYHTKTKMLKFIHNTHPSYKEPRLEPIRIHPSTSETIWIVASKPENIEGTTKKHVPKQYYCKQCPAKFFKSSALSYHVGLHGGEGEHKCKKCNYAVKNGGNLAKHELLHETESKVSNCDYDSGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNDGFAELEGQENIKQEDSSDNIKLAIKTMPKGVPRSDFQQFSISDQQTLRLLQRRRSMNNSAKETGNCENSPTKERKLHMCLLCPYTNQRQDSLSNHYRRHGEADALNAANHKCSYCDLVVVQSHFLREHLKTHFSYHKTLTPECFVANNDVSFTITKLNEDSESVDLKLDVRKSLVCNDDKIFVNIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01179923; iTF_01173748; iTF_01426298; iTF_00622396; iTF_01074041;
90% Identity: iTF_01179923;
80% Identity: -