Basic Information

Insect: Notodonta dromedarius
Gene Symbol: -
Assembly: GCA_905147325.1
Location: LR990159.1:4782384-4789069[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3 2e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 19 0.012 0.83 10.5 0.9 1 23 84 107 84 107 0.97

3 19 0.00072 0.049 14.3 0.8 2 23 214 235 213 235 0.97

4 19 2 1.3e+02 3.5 1.4 1 23 241 263 241 264 0.94

5 19 0.17 11 6.9 3.4 2 22 514 534 513 534 0.95

6 19 0.081 5.5 7.9 2.6 1 23 632 654 632 654 0.95

7 19 0.56 38 5.2 0.3 2 23 790 811 789 811 0.96

8 19 0.031 2.1 9.2 0.6 2 23 887 908 886 908 0.96

9 19 0.061 4.2 8.3 0.9 1 23 916 938 916 938 0.97

10 19 0.12 7.9 7.4 3.4 1 23 977 999 977 999 0.95

11 19 0.00023 0.015 15.9 4.0 1 23 1007 1029 1007 1029 0.99

12 19 0.0058 0.39 11.5 0.9 1 23 1112 1134 1112 1134 0.98

13 19 0.58 39 5.2 3.9 1 23 1190 1212 1190 1212 0.96

14 19 0.033 2.3 9.1 0.8 1 23 1302 1324 1302 1324 0.93

15 19 0.0095 0.65 10.8 0.9 1 23 1330 1352 1330 1352 0.96

16 19 0.0064 0.43 11.4 2.6 1 23 1442 1464 1442 1464 0.97

17 19 0.00016 0.011 16.4 1.4 1 23 1470 1492 1470 1492 0.99

18 19 0.79 54 4.8 2.7 1 23 1585 1607 1585 1607 0.96

19 19 0.0027 0.18 12.5 3.7 1 23 1618 1640 1618 1640 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3	2e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	19	0.012	0.83	10.5	0.9	1	23	84	107	84	107	0.97
3	19	0.00072	0.049	14.3	0.8	2	23	214	235	213	235	0.97
4	19	2	1.3e+02	3.5	1.4	1	23	241	263	241	264	0.94
5	19	0.17	11	6.9	3.4	2	22	514	534	513	534	0.95
6	19	0.081	5.5	7.9	2.6	1	23	632	654	632	654	0.95
7	19	0.56	38	5.2	0.3	2	23	790	811	789	811	0.96
8	19	0.031	2.1	9.2	0.6	2	23	887	908	886	908	0.96
9	19	0.061	4.2	8.3	0.9	1	23	916	938	916	938	0.97
10	19	0.12	7.9	7.4	3.4	1	23	977	999	977	999	0.95
11	19	0.00023	0.015	15.9	4.0	1	23	1007	1029	1007	1029	0.99
12	19	0.0058	0.39	11.5	0.9	1	23	1112	1134	1112	1134	0.98
13	19	0.58	39	5.2	3.9	1	23	1190	1212	1190	1212	0.96
14	19	0.033	2.3	9.1	0.8	1	23	1302	1324	1302	1324	0.93
15	19	0.0095	0.65	10.8	0.9	1	23	1330	1352	1330	1352	0.96
16	19	0.0064	0.43	11.4	2.6	1	23	1442	1464	1442	1464	0.97
17	19	0.00016	0.011	16.4	1.4	1	23	1470	1492	1470	1492	0.99
18	19	0.79	54	4.8	2.7	1	23	1585	1607	1585	1607	0.96
19	19	0.0027	0.18	12.5	3.7	1	23	1618	1640	1618	1640	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCGCAAGTCGGCGAGGTCGCGGCTCTCTTGCGCCAAGTCGACGGCCGCCTCTGCGGCGACGCTTCTTCGGAGGCCTCGTCTGATGCCGCGGACGATGCGGAGTTGCCGCAGTGCAAAATAAGGAGAAACTATAACTGCACCAAGTGCACGTTCTATACTCAGAACCCGCGCGCTTATCTCGTCCACACGCGCGACGCTCACTTCGTGAGACTTAAGATTTACGATTGTCCACAGTGCGTTTACGCCTCGAAAAATCATCAAAAGCTTGTGAGACATATAAAAATGATTCACTGCGCAAAGAAGAAAACGGATTCCGAGTTAGCACCTGTGGCTCACGAGACCACGGATCAATCAGAACGAATAGAAGATCTCCTAGAAGAAGTCGAGGATTGTGAAGACGTGTCGATGGAAGTCGATGACGACGTCGACGATCCCTCGGAGCGCCTCGAAGATGTCGACATGGACGGCGAAAGGAACTCGGAACGGGCTACCTCATCGGAGTTATTAAAGTCTAAAAGCAAATTCTTCTCATGCGACAAATGCACCTACGTGACCCACATAAGAGCGAGGTTCACGAAACACGTCAAGTATCACTCGATGCCGATGATCAAGTGCACGATCTGCGATTTCCGAACGCCGTACAAGTGGAATCTAGACCGGCACATGAAAAACCACGGCGGCAATGGTAGTTTCAATTGCTCCATGTGCAACTTTACGGCGGACATCAAGCAGAGTCTGACAGTGCACGAAATGAATCATCACACGCCGCCCGCGGGCCAATCGCTGGCGAGTCGCCGCCGTAACCGGGTGGGCGCCAGCGACACGGTGACCGTGGACGGCGACGCGGCGATGCGCGCCGCTCTGCTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCAGTCCTCACACTCGGCCTCGGAAATGGGTTTGCAGTACGCAGAACGAGATTTAGTCAGCTGTAAAAGCGATTCCAATGACGCTACCACATCTGACGCCACTGCCAAGAAAGATGCCCCGCACTTGGCACAAGAAATACACAGTCCGCCCTCACCTAACTCTAACGGAGACGACACAAAGACGCATAAACAAAGCAGAAAAATTCCAAGACCCATTCCACAACTTATACCATTAAATACTTCAACTCCTAATCAAAAGCAACCAGCGCTTGGTGAACCACCTCAAAAGAAATTCAAAGAATCATCAAACCGTGATATTGCCGATGGAAATTTAATAAGTAAAATAGACGGTTTACCAGGAGACATAACTTTAATACCCGTCAACAGTAATCCTACAGCAAAGGAGCATGGAGTTCGGAAGAAGAACGAGTCATTCTTTGACAGATTAAAAGAAAGACTGTTAACGGAAACAGGTGAAAATGGATCTCTAACTTGCAAAAACTGCGGGTTCGAAAGTAAATGTCTATCTGAACATTCCGTGCACGAGAAGAATTGCACGCCACAGACTAGTCGAATAGCTACAAACACATCGCTCTCCAGCTTGAGCTCAACACGGTGCCAAAATTGTAGACATAGATGCAAATCCAGTGCCGATCTATATGTTCACATGCAAACTTGCGGGAAGGGTCAATACTTGGAAAGTGAGTGTAAAGATATGATAAATCAAAATAGCAATGACGCCACGACGTCAAATAATGAAAAAGAGATTGAACCGCATCCGATGGAAAACGTCGTCTTTGTTTGGAACAACTTCAATCAAGAGTCGAGCAAGTTTGATATACCACTAGACATAAACATAAACAACGATTCCACTCTCCCTGAAATAAACAGTGGATATGATATTGAGGCCGTTGATGAAAACGAAACAATGAATTTATCACCAAGTCAAGCCGTTGGAAGAAAAGTTTTTAAGTGTCCACATTGCCCATTTTTCTCCACAACTGCATCCAGATTCCACGTCCATATCGTCGGGCACCTGAACAAAAAGCCCTTTGAATGTTCTCTGTGCAAATATAAATCTAATTGGCGATGGGATATTACAAAACATATTAAATTGAAGTCCGCCAGAGACCCAGAACATAATGAAGCAAAAGTACTCATGACCGATGAGACAGGCAGACGAAATTATAGCAAGTACAATAAATTTTTAGCGATGCCAATTCTGAATGAAAACGGCGAAAACGAATTCCACTATATAGACCCTAATACTTCAGTCGACGGCTCCATGGAAGTAGATGAACCATTCAGTGATATGTCGGACGCTATAAATATGCAACTTGAAATACAACCACTCAACTTGCAAACTGAACACAATCTGGATAAGTACGATATGATGAATAACACAGGTCTAGACATGAAAAAACCCAAGAAAACATTGTGGAAGTGTAAAAAATGTAACTACAAGGATCCTTCGAAAGAAGCTCTCTTAGAGCATGTACGTGAACACTCTCGGTCGGAGGGCAGTCAGGAAGACAAGATCCACAACGCCAAGAAGCCCGATAACACTCCGGATCCCGCTGATTTGGCTTATCGATGTGGGCACTGCAATCAATTATCCAATTGGAAACACGTTATACAGAGACACTGCCGTCTAAAGCACGATGGAATCATTAAAGTTATAACCACCGTCAAACCAAAACCTGACTCCATGGCCAATGAAATTACTAACGACACCTGTAACAAGTGTCCGTTCAAATCGAGTGACAAAAATGTACTACAAGCTCATTTACAACAACATCAACCGACACTGCAATCCGTGTTTAAGTGTTACTTCTGTCCATTCTTCGTTAAGGATGAACAAGAATTGACGCAGCATCTCTTGCTTCACGGCATAACTGATCCTGAAGACTACGCCGGTAAAGCGATAGGGTGTAAATCACCACCGTTAGACTTGCAAGGCCCGGCCATTCCGGCATGTACTTCAACTACGTCAACCAAGCGACACAAATGCACGGAATGTCCATATGAAACGAACAGCAAATCTCAGTACATGTATCATGAACAATTCCATAGATTACCAGCGGACACGCCTTATAAATGCCCCGAATGCAATTACAGTGTATCAAAGAGACACTTGCTCCATCAACATTTAAGAGTTCATGGAATTACGAAAAGAATTGAAACTGAGGCAGAATTAGAAGCATCAGCTTCGCTACAAAATAAATTGGATGCTAAAGTCGACGACCAAATGAACCTTGAGGAGATACCGTATGTATGGGTTTCTGCAAAGAACGAGTTCCACAAAATGTACAAATGTCGCTACTGTTCATACGTTAATTCCCAAAAATGTAAAATTCCCAATCACGAAAAAATTCATTGTGTTGTATTTGAGAATGACACAACCATTTATAAATGTTTGGAATGTAAGTACACCTACGACACCGCCAATAAACTAGCTGAACATTCCAAAATGCATGGGGAGATTTACGGCCGAATATATTGTCCCGTCGAAGATGATATCCCAGATGAAGAACAAATTACAAAATTACGAAAAGTTATAGAAATTGAAAAATGTAGTAATACAGACACTGTTAAAGAAGAAGACGGATTAGGAAACGAAAGCAGAGAGATAAAAACTTTATACTTCTGTCACAAATGTCCAGCAAGGTTTTTCGAAGACAGTGAGTTACATAGTCACGAAAAGCTTCACGACTTAACATATTTAAACAGATGTCAGTATTGTGAATTTTCCGTTCCGGAAGAAGAAGAATTAATTCCTCATAATCTTATTCACAATGATGAATATCACACAAAAACAAAGATGCTGAAATTTATTCATAACACACACCCAGCTTATAAAGAGCCTAGATTAGAACCTATACGTATTCATCCATCGACCTCGGAAACAATATGGGTAGTAGCGAGCAAGCCTGAAACAATTGAAGGGACTATTACGAAAAAGCACTTACCGAAACAATATTATTGCAAGCAATGCCCAGCAAAATTCTTTAAAAGCTCCGCACTGAGTTACCACGTGGGGCTTCACGGTGGTGACGGCGAGCACAAATGCAAGAAATGCAACTACGCTGTTAGGAACGGCGGAAACTTAGCTAAACATGAATTGTTACATGAAACTGAAAGTAAACCGTCTCATTGTGATTATGAATCCGGTGAGGACATGGATTATAAAAATATTCCATTATCAGGAACAGATTTGTTCCAAAGAAAGACTGAGGCTCAGAAAAGAGTGTTAATCGATAAAGATAAGTTAGTTAAGCCCAACGATCATTTCCCGCCTGTCCTACAGGCAGACCCACAATTTGGTTACTTGATGCACGGTAATCCCGAATTCATATATCCTACATACTTGAAAAACGGACGCCAAAAGGAAAAGCGTTATAAATGCCATAAATGTCCATCTGCTTTCGAGAAACGAGAACAATATAAAATACATTTATCATTACACGGTTCCAAACAGAGATATAAATGCGAATTATGCGATTATTCAGTTAAATATTACGCTAACTACGTCCAACATATGAGGAAACACCAAATGAATGACGAAGCGCAAGCAGAGAGGAAGAAAGATAGTAACGGGTTTCCAGAATCAGAAGGTCAAGAAAACATCAAACAAGAAGATAGCACCGACAATATCAAACTGGCGATCAAAACTATGCCAAAGGGAGCACCAAGAAGTGATTTCCAACAGTTCTCGATCAGCGACCAACAAACACTTCGATTGTTGCAGCGTAGACGGTCGATGAACAATAATTCAGGAAAAGAGACTGGTAATACTGAAAATTCGCCGACAAAGGAGCGTAAGTTGCACATGTGCCTATTGTGCCCCTACACAAACCAACGGCAAGATTCCTTGAGCAACCACTATAGAAGACATGGAGATACAGATGCCCTGAATGCATCTAACCATAAATGCTCGTATTGTGATTTAGTGGTTGTGCAATCACATTTTTTGCGGGAGCATTTAAAGACACATTTTAATTATCACAAAACCCTTACGCCGGAATGTTTCGTGGCTAACAACGATGTAAGTTTTACTATAACTAAATTAAACGAAGAGAGTGAGTCTGTTGATCTCAAACTAGATTTGCATGGTAAGGCTTTAGTGTGCAATGATGAAAAAATATTTGTTAAAATTAAAACAGGTGAACTATTGGTGGAATAG
Protein Sequence: MLQQMSSPPSAQVGEVAALLRQVDGRLCGDASSEASSDAADDAELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPQCVYASKNHQKLVRHIKMIHCAKKKTDSELAPVAHETTDQSERIEDLLEEVEDCEDVSMEVDDDVDDPSERLEDVDMDGERNSERATSSELLKSKSKFFSCDKCTYVTHIRARFTKHVKYHSMPMIKCTICDFRTPYKWNLDRHMKNHGGNGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLASRRRNRVGASDTVTVDGDAAMRAALLPKEEEGSGDSQSSHSASEMGLQYAERDLVSCKSDSNDATTSDATAKKDAPHLAQEIHSPPSPNSNGDDTKTHKQSRKIPRPIPQLIPLNTSTPNQKQPALGEPPQKKFKESSNRDIADGNLISKIDGLPGDITLIPVNSNPTAKEHGVRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCTPQTSRIATNTSLSSLSSTRCQNCRHRCKSSADLYVHMQTCGKGQYLESECKDMINQNSNDATTSNNEKEIEPHPMENVVFVWNNFNQESSKFDIPLDININNDSTLPEINSGYDIEAVDENETMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYIDPNTSVDGSMEVDEPFSDMSDAINMQLEIQPLNLQTEHNLDKYDMMNNTGLDMKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRSEGSQEDKIHNAKKPDNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDSMANEITNDTCNKCPFKSSDKNVLQAHLQQHQPTLQSVFKCYFCPFFVKDEQELTQHLLLHGITDPEDYAGKAIGCKSPPLDLQGPAIPACTSTTSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGITKRIETEAELEASASLQNKLDAKVDDQMNLEEIPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCVVFENDTTIYKCLECKYTYDTANKLAEHSKMHGEIYGRIYCPVEDDIPDEEQITKLRKVIEIEKCSNTDTVKEEDGLGNESREIKTLYFCHKCPARFFEDSELHSHEKLHDLTYLNRCQYCEFSVPEEEELIPHNLIHNDEYHTKTKMLKFIHNTHPAYKEPRLEPIRIHPSTSETIWVVASKPETIEGTITKKHLPKQYYCKQCPAKFFKSSALSYHVGLHGGDGEHKCKKCNYAVRNGGNLAKHELLHETESKPSHCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDSNGFPESEGQENIKQEDSTDNIKLAIKTMPKGAPRSDFQQFSISDQQTLRLLQRRRSMNNNSGKETGNTENSPTKERKLHMCLLCPYTNQRQDSLSNHYRRHGDTDALNASNHKCSYCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANNDVSFTITKLNEESESVDLKLDLHGKALVCNDEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01180748;
90% Identity: iTF_00622396;
80% Identity: -