Pbuc028961.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phalera bucephala
Gene Symbol
-
Assembly
GCA_905147815.1
Location
LR990622.1:21344664-21353809[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 3.6 5e+02 3.0 0.9 1 23 54 77 54 77 0.94
2 21 0.048 6.7 8.8 2.5 1 23 84 107 84 107 0.97
3 21 5.7 8e+02 2.3 4.0 1 23 186 208 186 208 0.96
4 21 0.00086 0.12 14.3 0.8 2 23 214 235 213 235 0.97
5 21 2.4 3.3e+02 3.5 1.4 1 23 241 263 241 264 0.94
6 21 0.2 28 6.9 3.4 2 22 512 532 511 532 0.95
7 21 0.098 14 7.9 2.6 1 23 630 652 630 652 0.95
8 21 0.69 97 5.2 0.3 2 23 787 808 786 808 0.96
9 21 0.0036 0.5 12.4 0.9 2 23 884 905 883 905 0.96
10 21 0.027 3.8 9.6 0.9 1 23 913 935 913 935 0.97
11 21 5.7 8e+02 2.3 2.6 1 23 972 994 972 994 0.93
12 21 0.00027 0.038 15.9 4.0 1 23 1002 1024 1002 1024 0.99
13 21 0.002 0.28 13.2 0.8 1 23 1107 1129 1107 1129 0.98
14 21 0.094 13 7.9 1.6 1 23 1185 1207 1185 1207 0.94
15 21 0.63 88 5.3 0.1 2 20 1214 1232 1213 1235 0.92
16 21 0.19 27 6.9 1.8 1 23 1301 1323 1301 1323 0.92
17 21 0.012 1.6 10.8 1.0 1 23 1329 1351 1329 1351 0.96
18 21 0.0076 1.1 11.4 2.6 1 23 1441 1463 1441 1463 0.97
19 21 0.00019 0.027 16.4 1.4 1 23 1469 1491 1469 1491 0.99
20 21 0.95 1.3e+02 4.8 2.7 1 23 1583 1605 1583 1605 0.96
21 21 0.0032 0.45 12.5 3.7 1 23 1616 1638 1616 1638 0.98

Sequence Information

Coding Sequence
ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCGCAAGTCGGCGAGGTCGCGACTCTTGTGCGGCAACTCGAAGGCCGCCTCTGCGGCGACGTGTCTTCGGAGGCTTCCTCAGACGCCGCAGAGGATTCCGAGTTACCCCAGTGCAAGATAAGAAGAAACTATAACTGCACCAAGTGCACGTTCTATACACAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCACTTCGTCAAACTCAAGATTTATGATTGCCCACAGTGCGTTTATGCCTCCAGACATCATCAAAAACTTTTAAGACACATAAAAATGGTTCACGGAGCAAAGAAGAAGGTAGACACAGAGTTATCACCTTACGCTTACGAAACCATAGATCAGTCGGAACGAATAGAAGATCTCCTTGAAGAAATAGAAGAGTGCGAAGATATGTTGATAGAAGTCGATGATGGGGTCGAGGATCCCTCGGATCGggtggatgatatagatatggaATGTGAAAGGAGAATACAGCAGGCCGCCTCGTCGGACTTAGTGAAATCTAAGGGCAAATTCTTCTCGTGCGATAAATGCAACTACGTGACGCACATAAGGGCTAGATTCACAAAACACGTCAAATATCACTCCATGCCGATGATCAAGTGTACGATATGTGATTTCCGGACACCGTACAAGTGGAATCTAGACCGGCACATGAAAAATCACGGCGGCAATGGAAGTTTCAATTGCTCCATGTGCAACTTTACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACGCCGCCCGCGGGCCAATCGCTAGCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACGCGGTAACCGCGGACGGCGACGCGGCGATGCGCGCCGCTCTGCTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCACGGTCCTCACACTCGGCCTCGGAAATGGGTTTACAGTACGCTGAGAGAGATTTAGTCAGCTGCAAAAGCGATTCCAATGACGGCAACGTTTCTGACGCCACTGCCAAGAGAGATGCCTCGCACTTGGCACAAGAAGTACACAGTCCGCAATCACCCGGCGCCAATATGGACGACGCaaagacaaacaaacaaaatagaaAAATCCCCAGACCAATTCCACAACTGATACCACTGAATACATCAACTCCTAATCAAAAACTACCCGGCGAACCACCTAACAAGAAATTCAAGGAATCAACTATCATTGACGTGTCCGAGGAAAATACCAGGAATAAAATCGACGACTTATCCGGGAACATAACTTTGATACCTATTAACAGTAATCCTACGATTAAGGATAATGTAGTTCGTAAGAAAAATGAGTCTTTCTTTGACAGATTAAAAGAACGACTATTAACAGAAACGGGAGACAACGGATCCCTTATATGCAAGAACTGCGGGTTCGAAAGTAAATGTCTATCTGAACATTCCGTACATGAGAAAAATTGCACCCCGCAATCTAATCGAATCTCTACAAACACATCACTCTCAAGCCTAAGTTCAACACGGTGCCAAAACTGTAGACATAGGTGTAAATCCAGTGCCGACCTATATGTTCACATGCAAACGTGCGGGAAGGGTAAATGCGTTGAGAATGAGAAAACAAACATGAGAAATCAAAATAGCAATGATGCGACTACTTCAAATCATGAAAAAGAAACTGAACCACATCCGATGGAAAACGTCGTCTTTGTTTGGAACAACTTCAATCATGAAGCAGGCAAATTTGATATACCACTAGACATAAACATAAACAACGATTCCACTCTCCCGGAGATAAACAGTAGTTACGATATTGAAGCCGGTGACGAAACCGAAACAATGAATTTATCACCTAGTCAAGCTGTTGGCAGAAAAGTTTTCAAGTGCCCACACTGTCCGTTTTTCTCGACCACTGCATCCAGATTTCATGTTCATATCGTAGGACACTTGAACAAAAAACCTTTCGAATGTTCTCTGTGTAAATATAAGTCTAATTGGCGGTGGGATATAACAAAACATATTAAGTTGAAATCCGCCAGAGACCCAGAACATAACGATGCGAAAGTACTCATGACCGATGAGACGGGAAGAAGAAATTACAGcaaatacaataaatttttGGCTATGCcagttttaaatgaaaatgggGAAAACGAGTTCCACTATATTGAGCCTCCGGCCGACGGCTCGATGGATGTCGATGACTCATTCACTGATAATATGTCAGACGGCACGAATGCGCAATTTGAAATGCAACCGCTTAACTTGCAAACTCAATACAACGAAGACAAGTATGATTTGATGGACGGCAGAGATCTTGACATGAAAAGACCTAAAAAAACATTATGGAAGTGCAAAAAATGTAACTACAAGGACCCATCTAAAGAAGCTCTCTTAGACCATGTGCGCGAACACTCTAAGCCAGAAAGTGGACAGGAGGAGAAGAACCACATGGCGAAAAAACCCGAAAATACACCGGACCCAGCGGACTTGGCCTATAGATGTGGGCATTGCAATCAATTATCCAATTGGAAACATGTCATACAGaGACACTGCCGGCTAAAGCACGATGGAATTATAAAAGTTATAACAACAGTCAAACCAAAACCTGATTCAGTACTCAATGAAATTACTAATGATACATGTAACAAATGTCCGTTTAGATCAAGTGACAAGAAGCTGCTTCAAGCGCATTTACAACAACACCAACCTTCGCCTGAATCAGTGTTTAAGTGCTATTTTTGTCCATACTTTGTTAAAGACGAACAAGAATTAACACAACATCTCCTACTTCACGGCATAACTGACCCTGAGGACTACATTGCTAAAGCAATAGGATGCAAATCCCCACCACCGTTAGATTTGCAAGGATCCGCCGCACCGTCAACTTCGGCGACGAAGCGACACAAATGCATAGAATGTCCCTATGAAACGAACAGTAAATCGCAATTTATGTATCACGAACAGTTTCACAGATTACCGGCAGACACGCCATACAAATGCCCTGAATGCAATTATAGCGTATCAAAGAGACATCTGCTTCATCAACACTTGAGGGTTCATGGAATTACTAAGAGAATTGAAACCGAAGCAGAATTAGAAGCTGCAGCGTCGCTACAAAATAAAATGGATTCCAAAGGCGATGATTTAATGGGCCTGGAGGATATACCTTATGTATGGGTTTCAGCAAAAAATGAATTCCACAAAATGTACAAATGTCGCTATTGTTCGTATGTTAATTCCCAAAAGTGTAAGATTCCGAATCATGAAAAAATACATTGCGTTGTATTCGAGAACGAAACAACAATTTACAAATGCCTAGAATGTAAATACACTTACGACAGCGCTAGTAAATTAGCGGAGCATTCCAAAATGCACAGTGAAATTTACGGTCGGATATATTGTCCTGTCGATGAAGATATACCAGATGAAGAACAAATTGCTAAATTGCGAAAAGTTATAGAAATTGAAAAATCAAGCAACACGGAAACTGATAAAGAAGGGGACTTGACAATGACCGAAAGCAGAGAGATAAAAACTTTACACTTTTGTCAAAAATGTCCTGCGAGATTTTTTGACGAAAACGAATTACAGAGTCATGGAAAGCTTCATGACTTAACTTATTTAAGCCGATGTCAATATTGTCAATTTTCAGTTCCAGAAGAAGACGAATTAACTACTCATATTCCTGTGCATAGCGATGAATACCACACTAAAACTAAGATGCTAAAATTTATTCATAACTGCCACTCTTCTTATAGAGAGCCTCGATTAGAACCTATACGCATCCATCCATCAACATCAGAAACGATTTGGGTAGTTTCTAACaaacctgaaataaatgatgGCAATACTAAAAAAGGTAATGATTCTAAACACGTGCCAAAGCAGTATTGTTGCAAACTATGTCCCGCTAAATTTTTCAAAAGCTCTGCGCTAAGCTACCACGTAGGGTTACATGGTGGAGAAGGCGAGCATAAGTGCAAAAAGTGCAACTACGCCGTAAAGAACGGAGGCAATCTAGCTAAACATGAATTATTACACGAAAATCTACACAAAGCGTCCAATTGTGATTATGAATCCGGTGAAGACatggattttaaaaatattccattatcAGGGACAGACTTGTTCCAAAGAAAGACTGAGGCTCAGAAAAGAGTGCTAACCGATAAAGATAAGTTAGTCAAGCCAAACGATCATTTTCCGCCTGTCCTCCAAGCGGATCCGCAGTTTGGTTATCTGATGCACGGAAATCCCGAGTTCATATATCCGACTTACTTAAAAAATGGCCGCCAAAAGGAAAAGCGGTACAAGTGCCACAAATGTCCATCTGCCTTTGAGAAACGAgaacaatataaaatacatttatcatTACACGGTTCTAAGCAGAGATACAAATGCGAATTATGCGATTATTCAGTTAAATATTATGCTAACTATGTTCAGCACATGAGAAAACACCAAATGAATGACGAAGCACAagcagaaagaaagaaaggtaataatggatttacagaGGCAGAGATCCAAGAAGATATTAAACAAGAGGATAGTAGTGATAATATTAAACTGGCAATCAAAACTATGCCGAAAGGTGCACCGAGGAGTGATTTCCAACAGTTCTCTATCAGAGACCAACAAACACTTCGACTGTTACAGCGTAGGCGGTCGATGAATAATTCCGCTAAAGAAACGAATGCTACTGACACTTCTTCGACAAAAGAGCGCAAATTACACATGTGTTTGCTGTGCCCCTACACTAATCAACGTCAAGATTCCTTGAGTAACCATTATAGAAGACATGGCGATACAGATGCCCTCAACGTATCAAGTCACAAATGTTCGTACTGTGATCTCGTTGTTGTGCAATCTCATTTTCTCCGGGAACATTTAAAGACACATTTTAGTTATCACAAAACTCTAACGCCGGAATGTTTTGTGGCTAACAAAGATGTGAGTTTTACTATAACGAAACTGACTGAACATAGTGAGTCCGTTGATCTCAAAATAGATGTGCAAAGTAAGAGTTTAGTTTGCAACgatgataaaatatttgtaaaaattaaaacaggAGAACTATTAGTGGAATAG
Protein Sequence
MLQQMSSPPSAQVGEVATLVRQLEGRLCGDVSSEASSDAAEDSELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVKLKIYDCPQCVYASRHHQKLLRHIKMVHGAKKKVDTELSPYAYETIDQSERIEDLLEEIEECEDMLIEVDDGVEDPSDRVDDIDMECERRIQQAASSDLVKSKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTICDFRTPYKWNLDRHMKNHGGNGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLASRRRNRVGASDAVTADGDAAMRAALLPKEEEGSGDSRSSHSASEMGLQYAERDLVSCKSDSNDGNVSDATAKRDASHLAQEVHSPQSPGANMDDAKTNKQNRKIPRPIPQLIPLNTSTPNQKLPGEPPNKKFKESTIIDVSEENTRNKIDDLSGNITLIPINSNPTIKDNVVRKKNESFFDRLKERLLTETGDNGSLICKNCGFESKCLSEHSVHEKNCTPQSNRISTNTSLSSLSSTRCQNCRHRCKSSADLYVHMQTCGKGKCVENEKTNMRNQNSNDATTSNHEKETEPHPMENVVFVWNNFNHEAGKFDIPLDININNDSTLPEINSSYDIEAGDETETMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYIEPPADGSMDVDDSFTDNMSDGTNAQFEMQPLNLQTQYNEDKYDLMDGRDLDMKRPKKTLWKCKKCNYKDPSKEALLDHVREHSKPESGQEEKNHMAKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDSVLNEITNDTCNKCPFRSSDKKLLQAHLQQHQPSPESVFKCYFCPYFVKDEQELTQHLLLHGITDPEDYIAKAIGCKSPPPLDLQGSAAPSTSATKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGITKRIETEAELEAAASLQNKMDSKGDDLMGLEDIPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCVVFENETTIYKCLECKYTYDSASKLAEHSKMHSEIYGRIYCPVDEDIPDEEQIAKLRKVIEIEKSSNTETDKEGDLTMTESREIKTLHFCQKCPARFFDENELQSHGKLHDLTYLSRCQYCQFSVPEEDELTTHIPVHSDEYHTKTKMLKFIHNCHSSYREPRLEPIRIHPSTSETIWVVSNKPEINDGNTKKGNDSKHVPKQYCCKLCPAKFFKSSALSYHVGLHGGEGEHKCKKCNYAVKNGGNLAKHELLHENLHKASNCDYESGEDMDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNGFTEAEIQEDIKQEDSSDNIKLAIKTMPKGAPRSDFQQFSIRDQQTLRLLQRRRSMNNSAKETNATDTSSTKERKLHMCLLCPYTNQRQDSLSNHYRRHGDTDALNVSSHKCSYCDLVVVQSHFLREHLKTHFSYHKTLTPECFVANKDVSFTITKLTEHSESVDLKIDVQSKSLVCNDDKIFVKIKTGELLVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01180748;
90% Identity
-
80% Identity
-