Basic Information

Insect: Phengaris arion
Gene Symbol: -
Assembly: GCA_963565745.1
Location: OY751443.1:6638857-6656884[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.6e-05 0.011 17.4 1.5 1 23 414 436 414 436 0.96

2 20 0.0017 0.22 13.3 2.1 1 20 442 461 442 464 0.94

3 20 2.1e-05 0.0026 19.3 5.6 1 23 483 505 483 505 0.98

4 20 0.00019 0.024 16.3 4.7 1 23 511 533 511 533 0.99

5 20 3.5e-05 0.0044 18.6 5.3 1 23 539 561 539 561 0.97

6 20 1.1e-05 0.0014 20.1 7.3 1 23 567 589 567 589 0.97

7 20 7.1e-07 9e-05 23.9 2.9 1 23 595 617 595 617 0.97

8 20 0.0001 0.013 17.2 6.7 1 23 623 645 623 645 0.97

9 20 4.5e-05 0.0056 18.3 5.4 1 23 651 673 651 673 0.98

10 20 4.9e-07 6.1e-05 24.5 1.9 1 23 679 701 679 701 0.98

11 20 5e-05 0.0062 18.1 7.9 1 23 707 729 707 729 0.98

12 20 2.6e-05 0.0033 19.0 6.3 1 23 735 757 735 757 0.98

13 20 4.1e-06 0.00052 21.5 4.5 1 23 763 785 763 785 0.98

14 20 9.4e-07 0.00012 23.6 4.2 1 23 791 813 791 813 0.98

15 20 2.3e-05 0.0029 19.2 7.3 1 23 819 841 819 841 0.97

16 20 3.6e-07 4.5e-05 24.9 4.7 1 23 847 869 847 869 0.98

17 20 8.9e-06 0.0011 20.5 8.0 1 23 875 897 875 897 0.97

18 20 7.7e-07 9.7e-05 23.8 1.5 1 23 903 925 903 925 0.97

19 20 0.00073 0.091 14.5 0.3 1 23 932 954 932 954 0.96

20 20 0.00021 0.026 16.2 2.6 1 23 962 984 962 984 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.6e-05	0.011	17.4	1.5	1	23	414	436	414	436	0.96
2	20	0.0017	0.22	13.3	2.1	1	20	442	461	442	464	0.94
3	20	2.1e-05	0.0026	19.3	5.6	1	23	483	505	483	505	0.98
4	20	0.00019	0.024	16.3	4.7	1	23	511	533	511	533	0.99
5	20	3.5e-05	0.0044	18.6	5.3	1	23	539	561	539	561	0.97
6	20	1.1e-05	0.0014	20.1	7.3	1	23	567	589	567	589	0.97
7	20	7.1e-07	9e-05	23.9	2.9	1	23	595	617	595	617	0.97
8	20	0.0001	0.013	17.2	6.7	1	23	623	645	623	645	0.97
9	20	4.5e-05	0.0056	18.3	5.4	1	23	651	673	651	673	0.98
10	20	4.9e-07	6.1e-05	24.5	1.9	1	23	679	701	679	701	0.98
11	20	5e-05	0.0062	18.1	7.9	1	23	707	729	707	729	0.98
12	20	2.6e-05	0.0033	19.0	6.3	1	23	735	757	735	757	0.98
13	20	4.1e-06	0.00052	21.5	4.5	1	23	763	785	763	785	0.98
14	20	9.4e-07	0.00012	23.6	4.2	1	23	791	813	791	813	0.98
15	20	2.3e-05	0.0029	19.2	7.3	1	23	819	841	819	841	0.97
16	20	3.6e-07	4.5e-05	24.9	4.7	1	23	847	869	847	869	0.98
17	20	8.9e-06	0.0011	20.5	8.0	1	23	875	897	875	897	0.97
18	20	7.7e-07	9.7e-05	23.8	1.5	1	23	903	925	903	925	0.97
19	20	0.00073	0.091	14.5	0.3	1	23	932	954	932	954	0.96
20	20	0.00021	0.026	16.2	2.6	1	23	962	984	962	984	0.99

Sequence Information

Coding Sequence: ATGAATCCggatcatcataatattaacaCGGGTGGTGGCCAACCTCCTGGCAATTCGGAGGCTCAGAGTCAAAGGGTTCCGTCGTCCCAGCAGCAGCAGTCTAACAGCCTAACTCCCACGACGTCTGCTACTGATTTACGTGTAAATTCCGCGGCAGTGAATGTTGCTTTGTCAAGCGTCGCTAAATACTGGGTATTCACGAATTTATTTCCTGGACCCATACCACAAGTATCTGTATACGGTTTGCCGACGAGTGCTAGGCTTGAGAATGGAAAACCTGTCCAGGACCTTGGTCAAGCTCATCAAAGTATACTGAATGGTGACCCAAATATCATTCTGGGCCACCATGGTGGCCAACAACCAGTAGCCGTCTCTGCATCCGGTCAACAAATACCTGTTTCTCAAATAATTGCCTCCCAGTCAGGACAAGATGCCCTGGCACATTCGCAGTCGGAACTCGGGTCTCAGTCATCCTCGTCCACAGCCCAGGTCACAGCCGGTGGTTCCCAAACACCGCACCAGGTACCCAATAACCGGGTGGAATTTGTACAACACCATAACATTGATATGGTAAATGATGTGGGCCATCACTCTCAGCAACTCTTACAGCAACAGCTGATGGCAGCTGCCCGGCAAGAGCATTCTAATCAGCAGATCCAACTCACAGTCAGCGAAGATGGAATAGTGACGGTCGTAGAGCCGGGCGGCAGCAACAAGTTGGTGGATAAGGAAGAGCTACACGAGACCATCAAAATGCCAGACCACGCCCTCACTGTTCACCAGTTGCAGCAAATTGTAGGACATCATCAGGTTATCGACAGTGTAGTACGTATAGAACAAGCCACTGGTGAACCAGCAAATATACTTGTGACACAGAATCCTGATGGCACCACCTCGATTGAGACGAGCTCCACGGACCTCAGCCTGGCCCAAGTAAAAGACGAGAAGACCACTATCGCGATACCAGCTGACATTAAGGATATCAAGGGAATAGATTTGAAGAATGTTGGTGCAATGGGTATGGAGGGTACAGTCGTGAAAATATCGACAGGCTCTGATCAAGATCTTCACACCATGTACAAAGTGAATGTGGAGGACCTATCTCAGCTGCTGGCTTATCATGAAGTATTTGGGAAACTCAATACAGAAACTCAACAGCAGGCTAAGGTAATAGCCGAGGTGGAAGTAGTCCCAGGGACAAGTGGCACCATGGCAGAGTCCGAGACATCTCCTGGACACCATGCCTGCGATATTTGTGGGAAAATATTCCAATTCCGATACCAGCTCATTGTCCACAGGCGATATCACGGAGAAACCAAACCTTTTACATGTCATGTCTGCGGCTCAACATTCGCCAATCCTGTTGAACTCTCAAGACACGGAAAATGTCATCTAGCCGGTGATCCTGCCGAGCGTCAGGCCAAGAGGTTAGCACAAGACAAGCCCTATGCGTGCACCACTTGCCACAAGACATTCTCACGGAAGGAACATCTTGACAATCATGTTCGGAGTCACACAGGAGAAACTCCTTACAGGTGTCAGTTCTGCGCCAAGACGTTCACTCGTAAAGAGCACATGGTAAACCACGTCCGCAAACACACGGGCGAGACTCCGCACCGCTGCGAGATTTGCAAGAAGAGCTTCACGAGGAAAGAGCATTTCATGAACCACGTCATGTGGCATACCGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGGTCCCACACTAACGATACTCCATTCCGATGTGAACTGTGCGGCAAGTCCTTCACCAGAAAGGAACATTTCACCAACCACATACTGTGGCACACCGGTGAAACCCCTCACCGCTGCGACTTCTGTTCCAAGACATTCACACGTAAGGAGCATCTACTGAACCATGTCAGGCAGCATACGGGCGAGTCGCCTCACCGCTGTAACTACTGCGCAAAGAGCTTCACTCGTCGAGAACACCTCGTCAACCATGTAAGACAACACACTGGAGAGACTCCATTCCAGTGTGGCTATTGTCCGAAGGCTTTTACCCGGAAAGACCATTTAGtGAACCACGTGAGACAGCACACCGGTGAATCTCCACACAAATGTTCGTTCTGTACCAAGTCGTTCACCCGCAAGGAACATTTGACCAATCACGTCAGACAGCATACAGGGGAATCACCGCATCGATGTTCGTACTGCGCGAAGAGTTTCACTCGCAAGGAACATCTCAATAACCATGTTAGACAGCACACCGGCGAGACTCCTCACAAGTGCACGTACTGCCCGCGCGGGTTCGCGCGCAAGGAACACCTCACCAACCACATACGACAGCACACCGGCGACGTGCCCTACTCCTGCTCCTACTGCAGCAAGAGCTTCACGCGGAAAGAGCATCTGGTCAATCATATCCGACAACACACTGGCGAAACACCGTTCAAGTGCACATACTGCACCAAGTCGTTCTCGCGTAAGGAGCACCTGACGAACCACGTCCATCTACATACCGGCGAGACGCCGCACAAGTGTCCGATCTGTACGAAAACATTCTCCAGGAAAGAGCACCTTACCAATCATGTCAGGATACACACGGGCGAATCGCCGCATCGGTGTGAATTCTGCAACAAGACATTCACGAGGAAAGAGCATCTAACGAACCATATGAAGCAGCATTCCGGCGACACCGTGCACCCCTGCAAGATCTGCTCCAAACCCTTCTCAAGAAAAGAATTACTGGCTACACATATgagATCGCACAGCTGCGGCGAGCGGCCGTTCAGCTGCGGGGAGTGTGGCAAGTCGTTCCCTCTCAAGGGAAATCTGCTGTTCCACGAGCGCTCGCACAATAAGGGCGGTGCGGGAAAATTCCGATGTGATATATGCTCCAAGGACTTTATATGTAAAAGCAATCTGGTGGCGCATCGACGCACGCACGTGGAGTCGGGCGAGGCGGCGGCCGAGGACTGCGGCGACTGCGAGAAGGAGGAACCAGTTGAGAGGAAACACAACATAcgAGAATCATCTGAGGGTCGAACAACGGAGAGTGTTGTTCAAAACCAACAGAATGCGTCCACAGTCATGCAACAGATCACAAATCAGACACAAGTTCGTGCAGCAACTAGCGGGTCCAGCGTTGGCTCCGGCAGCTTCTCCCACACGGCCAGCTCTCAGCACCACTCCAGCGCCGCTATAGCCCACCACACGGTCACAGTGAACTACTAG
Protein Sequence: MNPDHHNINTGGGQPPGNSEAQSQRVPSSQQQQSNSLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTSARLENGKPVQDLGQAHQSILNGDPNIILGHHGGQQPVAVSASGQQIPVSQIIASQSGQDALAHSQSELGSQSSSSTAQVTAGGSQTPHQVPNNRVEFVQHHNIDMVNDVGHHSQQLLQQQLMAAARQEHSNQQIQLTVSEDGIVTVVEPGGSNKLVDKEELHETIKMPDHALTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSSTDLSLAQVKDEKTTIAIPADIKDIKGIDLKNVGAMGMEGTVVKISTGSDQDLHTMYKVNVEDLSQLLAYHEVFGKLNTETQQQAKVIAEVEVVPGTSGTMAESETSPGHHACDICGKIFQFRYQLIVHRRYHGETKPFTCHVCGSTFANPVELSRHGKCHLAGDPAERQAKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLNNHVRQHTGETPHKCTYCPRGFARKEHLTNHIRQHTGDVPYSCSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPICTKTFSRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHMKQHSGDTVHPCKICSKPFSRKELLATHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGGAGKFRCDICSKDFICKSNLVAHRRTHVESGEAAAEDCGDCEKEEPVERKHNIRESSEGRTTESVVQNQQNASTVMQQITNQTQVRAATSGSSVGSGSFSHTASSQHHSSAAIAHHTVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00925938;
90% Identity: iTF_00744950;
80% Identity: -