Pari020620.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- clz9
- Assembly
- GCA_963565745.1
- Location
- OY751440.1:8605566-8607341[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-09 7.3e-07 30.0 0.0 1 35 14 48 14 56 0.91
Sequence Information
- Coding Sequence
- ATGGCCCGTACCTACGTCCGTAAGAAAGTTAAACCATACACGCCAGAAGACTTAGCCGAGgcgttacaaaaaataaaaaatggagaaCTTACCATAACCACTGCAGCAGAACAATACTCCATTCCAAAAGCGACTCTAAGTGAAAATATGCATTCTAAGTATTCCAGGCCAACTGCAGGTAGACCTACAATCTTTTCATTGGAAGAAGAAGAACGTTTAGCAGATGCcataaaaataatggaaaaatgGGGATTTGGATTGTCAAgacaagaaattttaaaaattgtcgcTGAATACGTAACGGCaaataagattaaaacgccatttaaaaataacacgcCCGGTCCAGATTGGTTCATCAACTTCCGCAAACGTCACCGCCTCTCTATAAAGAAAGCACAGCCCGTGGAATATGTACGCAAAAAAATGAcggatccatttttcattttcGAGTACTTCGACTTGCTAGAAAAGACTTTGATAGAGTTGGATCTTATTGACAAACCTCAAAACGTCTGGAATCTAGATGAAACGTCTCTGTGTCTGGACCCTACTAGAACAAAAGTAGTGGGAGCCATCAATAAACCCTGTGCAAGAACCACTTACGGTTCTGGCAAGGAAAATATAACAGTATTGGCAGGTGCAAATGCTGCAGGCAAGAAATTACCACCTTTAATTGTCTTTAAAGGAAAATATGTTTGGGATCAGTGGATGGCTGCAACAGATGATTACGACTTCGAGTTATCGTATGCTGCAAGTCCTAAGGGGTGGATGCAGACCGACATTTTCTATAACTACATAAAAACGATTCTCATTCCAAGTGTAGGTCAGGAGAGACCAGTCTTGTTAGTGTATGATGGCCACTCTACCCATGTCGATGTAAAAGTTATAGAATTGGCAATTGAAAATGGCATAACCATTCTCAAGCTCCCACCACATACATCTCATTTGCTTCAACCGCTTGATATAGCAGTTTTCAAATCCTTTAAGAGCAAGTGGGATGCCAAACTAGTCGACTGGCAGCGTCGAAACATTGGCACTAAAATGGCGAAAAACATATTCTCGAAAACACTTGCTAATACATGGCAAGAAACCGCACCCGACATCATTAAAAATGGGTTTAAAAAAGCTGGAATTTTTCCGTTTGATGCCAGTGTTATACCTGTGGAAAAGTACGATCCAAATGCCTATAGAAGGTACCAGTTAATAAGAGAAGAGCGTTTGCTCCAAAGTCAACAAAATACAAGTAGTCCGGAAtcattgaaaaaaatttgtatcgATTATTTTAATGAACAGAATAACATACCTGACGCAACTCTTCACAAACAGTGCCCACCGGACCAACAAAACGACACTCTTGGGGAACCGAAGTCAATAAACCACCAATTTACTAATATTCCAACTGAAAATGTAACCTTATTATCTCAAATTCCAAAATCTGATAGCCAGATGACGGTTTTTTTAGCTGAAGATTCAACCTCTATGCCAACATGTTTAAAAGAAGCTCGTCCTGATCCGAAAAACAACGAAACAGTTAAAAatcctaatataattataacatctAACATTGTCATCAAAAAATCCTCCATAACTTTCAATGCAGCGCCACAAACACCTCTTTCACCAGCATCTCCAAGAATCTTCACATTTGAAGAAGCTTTTCTGAAAAAGATACAAcaggaaaagaaaaacaatgatactgtgataaaaaaaaaacgtatctCAAAAGGTGCCGAAGTGATAACCAAGTCTATGAGTAAGAAACAAGAATCTTAA
- Protein Sequence
- MARTYVRKKVKPYTPEDLAEALQKIKNGELTITTAAEQYSIPKATLSENMHSKYSRPTAGRPTIFSLEEEERLADAIKIMEKWGFGLSRQEILKIVAEYVTANKIKTPFKNNTPGPDWFINFRKRHRLSIKKAQPVEYVRKKMTDPFFIFEYFDLLEKTLIELDLIDKPQNVWNLDETSLCLDPTRTKVVGAINKPCARTTYGSGKENITVLAGANAAGKKLPPLIVFKGKYVWDQWMAATDDYDFELSYAASPKGWMQTDIFYNYIKTILIPSVGQERPVLLVYDGHSTHVDVKVIELAIENGITILKLPPHTSHLLQPLDIAVFKSFKSKWDAKLVDWQRRNIGTKMAKNIFSKTLANTWQETAPDIIKNGFKKAGIFPFDASVIPVEKYDPNAYRRYQLIREERLLQSQQNTSSPESLKKICIDYFNEQNNIPDATLHKQCPPDQQNDTLGEPKSINHQFTNIPTENVTLLSQIPKSDSQMTVFLAEDSTSMPTCLKEARPDPKNNETVKNPNIIITSNIVIKKSSITFNAAPQTPLSPASPRIFTFEEAFLKKIQQEKKNNDTVIKKKRISKGAEVITKSMSKKQES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01502910;
- 90% Identity
- iTF_00698210; iTF_01090693; iTF_00034639; iTF_00906061; iTF_01076369; iTF_01076370; iTF_01076371;
- 80% Identity
- -