Nrev011584.1
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- clz9
- Assembly
- GCA_947037095.2
- Location
- OX344844.2:2291138-2292877[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-09 5.9e-07 30.1 0.0 1 35 14 48 14 56 0.91
Sequence Information
- Coding Sequence
- ATGCCCCGTACCTACGTCCGTAAGAAAGTTAAACCATATACGCCAGAAGACTTAGCCGAGgcgttacaaaaaataaaaaatggagaACTTACCATAACCACTGCAGCAGAACAATACTCCATTCCAAAAGCGACTCTAAGTGAAAATATGCATTCTAAGTATTCCAGGCCAACTGCAGGTAAACCTACAATCTTTTCATCGGAAGAAGAAGAACGTTTAGCAGATGCcataaaaataatggaaaaatgGGAATTTGGATTGTCAAGAcaagaaattttagaaattgTCGCTGAATACGTAAAGGCAAATCAGATTAAAAcgccatttaaaaataacacgcCCGGTCCAGATTGGTTCATCAACTTCCGCAAACGTCACCGCCTCTCTATAAAGAAAGCACAGCCCGTGGAATATGTACGCAAAAAAATGACGGATCCATTTTTCATTTTCGAGTACTTCGAGTTGCTAGAAAAGACTTTGATAGAGTTGGATCTTATTGACAAACCTCAAAACGTCTGGAATCTAGATGAAACGTCTCTGTGTCTGGACCCTACTAGAACAAAAGTAGTGGGAGCCATCAATAAACCCTGTGCAAGAACCACTTACGGTTCTGGCAAGGAAAATATAACAGTATTGGCAGGTGCAAATGCTGCAGGCAAGAAATTACCACCTTTAATTGTGTTTAAAGGAAAATATGTTTGGGATCAGTGGATGGCTGCAACAGATGATTACGACTTCGAGTTATCGTATGCTGCAAGTCCTAAGGGGTGGATGCAGACTGACATTTTCTATAACTACATGAAAACGATTCTCATTCCAAGTGTAGGTCAGGAGAGACCAGTCTTGTTAGTGTATGATGGCCACTCTACCCATGTCGATGTAAAAGTTATAgaattggcaattgaaaatggCATAACCATTCTCAAGCTCCCACCACATACATCTCATTTGCTTCAACCGCTTGATATAGCAGTTTTCAAATCCTTTAAGAGCAAGTGGGATGCCAAACTAGTCGACTGGCAGCGTCGAAACATTGGCACTAAAATGGCGAAAAACATATTCTTGAAAACATTTGCTGATACATGGCAAGAAACCGCACCCGACATCAATAAAAATGGGTTTAAAAAAGCTGGAATTTTTCCGTTTGATGCCAGTGTTATACCTGTGGAAAAGTACGATCCAAATGCCTATAGAAGGTACCAGTTAATAAGAGAAGAGCGTTTGCTCCAAAGTCAACAAAATACAAGTAGTCCGGAATCATTGAAAAAAATTTGTATCGATTATTTTAATGAACAGAATAACATACCTGACGCAACTCTTCACAAACAGTGCCCACCGGACCAACAAAACGACACTCTTGGGGAACCGAAGTCTATAAACCACCAATTTACTAATATTCCAACTGAAAATGTAAACTTATTATCTCAAATTTCAAAATCTGATAGCCAGATGACGGTTTTTTTAGCTGAAGATTCAACCTCTATGCCAACATGTTTAAAAGAAGGTCGTTCTGATCCGAAAAACAACGAAACAGTTAAAAAtcctaatttaattataacatctAACATTGTCATCAAAAAATCCTCCATAACTTTAAATGCAGCGCCACAAACACCTCTTTCACCAGCATCTCCAAGAATCTTCACATTTGAAGAAGCTTTTCTGAAAAAGATACAACAGGAAAAGAAAAACAATGatactgtgataaaaaaaaacgtatctcAAAAGGTGCCGAAGTGA
- Protein Sequence
- MPRTYVRKKVKPYTPEDLAEALQKIKNGELTITTAAEQYSIPKATLSENMHSKYSRPTAGKPTIFSSEEEERLADAIKIMEKWEFGLSRQEILEIVAEYVKANQIKTPFKNNTPGPDWFINFRKRHRLSIKKAQPVEYVRKKMTDPFFIFEYFELLEKTLIELDLIDKPQNVWNLDETSLCLDPTRTKVVGAINKPCARTTYGSGKENITVLAGANAAGKKLPPLIVFKGKYVWDQWMAATDDYDFELSYAASPKGWMQTDIFYNYMKTILIPSVGQERPVLLVYDGHSTHVDVKVIELAIENGITILKLPPHTSHLLQPLDIAVFKSFKSKWDAKLVDWQRRNIGTKMAKNIFLKTFADTWQETAPDINKNGFKKAGIFPFDASVIPVEKYDPNAYRRYQLIREERLLQSQQNTSSPESLKKICIDYFNEQNNIPDATLHKQCPPDQQNDTLGEPKSINHQFTNIPTENVNLLSQISKSDSQMTVFLAEDSTSMPTCLKEGRSDPKNNETVKNPNLIITSNIVIKKSSITLNAAPQTPLSPASPRIFTFEEAFLKKIQQEKKNNDTVIKKNVSQKVPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01502910;
- 90% Identity
- iTF_01178430;
- 80% Identity
- -