Pari037042.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751451.1:16412101-16414023[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-11 7.6e-09 36.4 0.0 2 37 16 51 15 55 0.94
Sequence Information
- Coding Sequence
- aTGGTTCGCACATACAAAAGAAAAACTAATGCCGGAGAATGGTCTCAAGAAAAAATGAAACAGGCTGTAAATAAAGTCCAGAACAAAGAGTTGTCCTTACGTAAGGCTGCTGATATTTTTGCAGTACCGTTCACGAGCTTACAGAGAAGAGTTACTTTATCCAGTGGTATTATTAAGCGTCGAGGTGGACAGCCATCTTTAGATGAGAACGCAGAAAAGAAGTTAGCTGACCGGCTATTGCACTTGGCAAGTCGTGGCTTCGGAATTACACCCAAAGCGGTACGTAAGTACGCGTTTGAATTTGCAGAACGTCAAAACATAAAACACAAATTTGACAGAAATGCTGGAATGGCTGGCCAGGACTGGTTTCATCGCTTCatgcaaagaaataaaaaattaactattCGGAAGCCGGAGGGTCTGTCAAGAGCAAGGATTGATGGTATGAAGAAGGAGAAAGTGACAGAATTCATTAATACTTTGGAAACAGTAGTAAATAACAACAATTTAAGAGCAAGACCTGAATGTGTATACAATGTTGATGAAACGGGGATGCCGCTTAGTAACCGCCCACCCAACATTATAGCCCAAAAAGGTGCTAAAGATGTTGTCAGCATGACCAGTGTTGAACGAGGTGAAAATGTAACTGTTCTAGCCTGTATGAATGCAGCAGGACAATACATACCTCCATTTGTTCTATTCAAAGGTGTGCGTAAGAGTGACGATTTTCTTCTAGGTATGCCACCTGGTACTGAAGTTGCCATGACAGAAAAGGGCTGGGTCACCGAAGAAGCTTTTAAGTTGTGGCTACAACATTTCAATCGCTACCGGACCCCAGGAAAAGTAATTCTAATTTTGGATGGGCACGCGTCTCACACCAGCTACTCAGTGGTAGACTTGTGTGACTCTTTCGAAATTGAACTTGTACTTCTTCCTCCACACACATCACATGCCCTGCAACCGCTCGATGTATCGTTTTTCAAACCACTCAAAACTTATTATCACCAACAAGCTACAGCATGGCAACATTCACATCCGAATCAAGGAATCACAAAAGTCGCTTTCGGAGCACTTTTCCAACGGGCTTGGAATCAGACTGCCACTGTTGGGAATGCTACAAAAGGCTTCGAAAAGACTGGAATATTTCCACTAAACGCCAATGCAATACCTGACCACAAGTTCATCGGTGATCAAGAGTCGGACATAGTAGAGTCCCAAGTCCAATCCCCAAGTTCCCAACAAATGCAGCTACAAGTGCAAGCCACAAATACACAACCAGTAGCTGATACAGTGTCATCTGCAAGTTCACGACAGTCTGACAAAGCCCAGTCTTCTACCTGTGCAGatgaagaaagaaagaagatgaAGAATAAAGCAACGCCTGGGATAAAAATTAAGAGTTTATCAGCAAAACAGAGAGCATCAGCAAAACCACTTGATAATATAGTGCCATCCACAAGTTCGCAACAATCTGACGAAGCCCAACCTCCCACCTGtgtagaaataattaaagaaattctTCCATCACCTTTAAAGTCACCAAATGCTTCTAAAAGAATTCGTAAAGTTTCAAAACTGGTCTTGCATTTAACATCACCTCAGAGTAAGACTACTCTTCTagaaaaagaaacaaagaaGAAATTTAAGGTAGACAATAAAACCAAAGAAAATAAGGAAAAGGCTGTGGGCAAAGAAAATACTATGAAGAAGATGAAGAATAAAGCAAAGCCTGCGATAAAAATTAAGAGTTCATCTGGAAAACAGAGAGAGTGGCACTGCATTTACTGTTCCGAAATATTCGTTCATCCACCATCAGAGGATTGGATTCAGTGCAATGCCTGCGAAGAATGGTGCCACGAAAAATGTGCTGATATAAGGGGGAAAAAAGGACCATATATATGTGAATTATGTGCCGATAATTAA
- Protein Sequence
- MVRTYKRKTNAGEWSQEKMKQAVNKVQNKELSLRKAADIFAVPFTSLQRRVTLSSGIIKRRGGQPSLDENAEKKLADRLLHLASRGFGITPKAVRKYAFEFAERQNIKHKFDRNAGMAGQDWFHRFMQRNKKLTIRKPEGLSRARIDGMKKEKVTEFINTLETVVNNNNLRARPECVYNVDETGMPLSNRPPNIIAQKGAKDVVSMTSVERGENVTVLACMNAAGQYIPPFVLFKGVRKSDDFLLGMPPGTEVAMTEKGWVTEEAFKLWLQHFNRYRTPGKVILILDGHASHTSYSVVDLCDSFEIELVLLPPHTSHALQPLDVSFFKPLKTYYHQQATAWQHSHPNQGITKVAFGALFQRAWNQTATVGNATKGFEKTGIFPLNANAIPDHKFIGDQESDIVESQVQSPSSQQMQLQVQATNTQPVADTVSSASSRQSDKAQSSTCADEERKKMKNKATPGIKIKSLSAKQRASAKPLDNIVPSTSSQQSDEAQPPTCVEIIKEILPSPLKSPNASKRIRKVSKLVLHLTSPQSKTTLLEKETKKKFKVDNKTKENKEKAVGKENTMKKMKNKAKPAIKIKSSSGKQREWHCIYCSEIFVHPPSEDWIQCNACEEWCHEKCADIRGKKGPYICELCADN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158755; iTF_01158659; iTF_01158723; iTF_01158756; iTF_01158825; iTF_01153803; iTF_01153804; iTF_01153805; iTF_01158748; iTF_01153801; iTF_01158636; iTF_01153838; iTF_01158747; iTF_01153802; iTF_01178364; iTF_01187325; iTF_01203178; iTF_01204813; iTF_01204814; iTF_00888164; iTF_00717669; iTF_00984970; iTF_00984969; iTF_00984982; iTF_00394287; iTF_00910446; iTF_01043630;
- 90% Identity
- iTF_01178364;
- 80% Identity
- -