Basic Information

Insect: Phengaris arion
Gene Symbol: rfx7.L
Assembly: GCA_963565745.1
Location: OY751440.1:10976089-10981216[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.3e-20 1.2e-15 59.1 0.1 36 78 3 45 1 46 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.3e-20	1.2e-15	59.1	0.1	36	78	3	45	1	46	0.95

Sequence Information

Coding Sequence: ATGAGCTGCAATATGAAACCCCTTTCGACGGCTGACTTTGGAAAAGTGATGAAGCAAGTGTATCCTACTGTACGACCGCGCCGCCTGGGAACCCGTGGTAACTCGAGGTACTGCTATGCCGGTCTTCGCAAAAAAGTCAAACTTGAAGCACCACATTTGCCAGATTTGGGGGAAAGTTCTAAGgAATTTAATGTCCCATCTAGAGAGAGTGAAAGAATTGTTTGTGATTGGGCTGAAACTAAGTTTGGAGTGAAGTTCGGGAGCGTGCTGGAGTTGTCGCGTCACTTGGCGGCGCTGGGCACTCGCGCGCCGCCCGGGCCCGCCAGCGCGTCGCCGCCGCACGCGCCTATACACGGTCCTACAGAAGATCCGCTAGGTCCACAGTTGATAAAACAATTGAAGCGTAAATTACAGGGTACGGGAACGCCTGGACGTCCGAAAAAGAATAAAGGGCAGGATACGTCAGGTGTATCACCGCCTTCTACTTCGTACATCCCGCAGTTGCCCGTGAAACACGAGAGCGAGATTCCCGCCGAAACCAGCTATGGATACCAGCCTGCTTACGTACCCGTGTATGACGTCAGACCGTCGTTCCCCTACACGGCGCCGCCCCACGCGCACCCCCCGCACGCGCCTCCCGCGCCGCACCCGCCCATCTCTGTGCACGACTACCGCGCGGACCCCTACGTGTTTGACCCCCCGTATGCGCCCCGGGATCTCACCATACCCGCCGACGCCACTCACAACCTCCCCATAAATCTCAGCAGCGACGCGTCCCTCGATCTATCCACCGAGCGGACCGAGTGGCAGCGGCGACGGCCCCCGGATCCGCCGGCCGCGCGACTACCGCCCCTGCCAGGAAAAAAACTTATTCTTGAAACCTATCAAAGCGAAACGCAAGCCGGCTCGCCGCGCCCCTCGCAGACCAACACGCGCTCCACGCACACGGAGGAGTTCCCGAGAGCCGAATACCTGCCCAAAAAGATGCGCGCCGCCGAAATGTCCGGAGGAAAGCTGGCAGCGGCGCGCCAAGCGGCGATCGGAGCGGAGCCCACGTCGTCGACTGGCGCGACCAGTGCCGACACGTCTTTACGTTCAGAGGTTGCTTTTTTAGAGGATCCAAAAAACTTAACGAACCGGTCCACAAGCACCGCCGCGGCGCTGGCCCGGGAGGAACTAGAGGCGGCGAGTCCGACACAGTCGGTGAAGGCTCCGACGCCTAAGAGCGATCGCACCAGAATGCGAAAGCCCTACGACCGAACTAAAAAGTTATCCCCAGATGGAGCAAACCAATACGATAGAGCCGTTACGCCCGACGCTTACTGCGGGCTAGACGGTATCAATATCAAAACGGGAGTGATATGCGACGAAAAGCATTCAGAAATTTTTAATCGCGAACGTGTGATTAGCATCTGTAATATCGATAAACACGATTTAGATGACTACCTCAACGAAGGCAATAGTCAAGAACATGAGGAGGAGCTAATGCAATACTTTCACCGAGGAAATGCCAACGAAGTCTCGAACAACTCAACAACCaaccctaaaaattttttaGACGCAAGCCAGGACCCACACGACGAACACAGCCAAGGGAAAAATGAGAAGTTATCGCAGCTACGCGAACTTCTAGCTAAAAATCTCAAAAATCAAAGTGGGTCCAATTCGATACCACAAAATAGTGCTACAAACGAAGACACAAATTTACCTCTCACTAATGACAATTTGTCGGAGctaaacaaaaatgttaatgAGGGCGCCTTCAAGCCAGTGAACAACTTATCCGACATTGTTAACGGTTCTGCCAACGTACCCAATACACACGAGTGTACCAAAAACCCACTTCCATTGCCCAACGAAAACGGAATACATATTGCGGAAACGACACAAAGTATATTACTTAATTCCATAGCGCCGACTCAACTTTATAACGGTACTATGAATCATGAACCGCAAAGTCCTACGACTAGAACTCAACAGTACGATTTTGTGCCTATATCGGAGGGTTGTCACTCTCCCGCTAACGTCAGATCCAAATCACCCTCGGGCTTGGGGCCTAGAGGCAGCAGTCCGTCCAAAGTTGCTAAGCTCGTACTGTGTGGCTCGCTCCAAACGTCGCCCAACTCCCACAGCACGGTGGCTAGTCCGTTCGTCAGCCCCCGAAACACTCCAGTGCCTCGGTCGCGCCTGTTCCCGCGCCCGATACCCAAACACAACGAGAAGAGGAAACGCAACACGCTCACACTCGGCGTCCAGGATTCGTGCTCGAAGCCGTTCGCCATACCCAATGACCAGAAATATGTACCCAGAACCACATTAAACTCGAACATTAAATATTGCCAACCAATGTCGGCGCCGCCATCACCGAATATACTGACGAATTACAAAACCCAACTTATGCAAAGCGGTGCAATCACCAACGGTTCTAATAATATGAGAATAAATTTCGTGCCAAATTTGTTTCGTGACAATATAAACGGCGAACTCACTCAGCCTCTATCGGCCGATCCCCTGTCGAGTGAAGTAAGTCAGTTTTTTCAAGAGCCCGTGATTAATTATAGATTGCACGATGTTTCGTTTAGGTCGCAATCTGTGCCCTTAAAACAGGCCACTTTGAACGTCGGACTGCTGAGTTACAACAACACGCCGGTCGGCTCCATACCACCGACTCCGGTTCCGAATGAATTTAGCGACTTCGGGTCGCTTGCAGAAACGTGCGATATTTCTAAAGCTGGCCTCAATCCCGAAACGCTAGATAAAATTTACGATGCGATCGACAGCAGCAATGACGTACTTAACACCGCCGCAACGACCAATCTTTTAAATCCTAATCAAGCGATCACGAACGGTTGCGATCCTTTGCCGGACCAGCAGATACTCGCAGAGGAGCAGATACATCCGTTCATCGCAACTAACACGGACATGCTCGATAGAAACGCCCAATTCAACGATTCGTTTGCCGGCGACGCAGGCACCGGTGATAACGTGGAGGAGTTCCTCAAACGTACCAACAGTATAGAATTCGACCTGTCAGATTTAGTCACCGAGAAAAGCAAATACTATACCTCGAGATCGGTGCCCAGCACTCCCTTGCCCTACAAGAGAACCGCACCGAACTTGCAGATCGAGTCAAGACGTTCAAGAGAATTGTTCACTGCAGACTTCAATCTCGTTTCGAATGGGATATCGTCGAAATCCGTGCCGTCCACTCCGCAACTCCCAGAGGACAGGAGCGTCTTCAGTTACAGCAACAGAGATTACTTGATCAATGGAAATTCTGTTGAGGTAATATGTGGCGCGAACCAGATAAATACCGTGGTCGAGAGCGACCAAACCTTGGCTTCTCCTCTGGACATGTTGCGTGAGGACATTCTGGAACCATTGTCGGGACCCACCGCCGATTTGCTGGCAGATTTTGACAAGATCGACGGTCCCCCATACGTAGTTGACCTCTAG
Protein Sequence: MSCNMKPLSTADFGKVMKQVYPTVRPRRLGTRGNSRYCYAGLRKKVKLEAPHLPDLGESSKEFNVPSRESERIVCDWAETKFGVKFGSVLELSRHLAALGTRAPPGPASASPPHAPIHGPTEDPLGPQLIKQLKRKLQGTGTPGRPKKNKGQDTSGVSPPSTSYIPQLPVKHESEIPAETSYGYQPAYVPVYDVRPSFPYTAPPHAHPPHAPPAPHPPISVHDYRADPYVFDPPYAPRDLTIPADATHNLPINLSSDASLDLSTERTEWQRRRPPDPPAARLPPLPGKKLILETYQSETQAGSPRPSQTNTRSTHTEEFPRAEYLPKKMRAAEMSGGKLAAARQAAIGAEPTSSTGATSADTSLRSEVAFLEDPKNLTNRSTSTAAALAREELEAASPTQSVKAPTPKSDRTRMRKPYDRTKKLSPDGANQYDRAVTPDAYCGLDGINIKTGVICDEKHSEIFNRERVISICNIDKHDLDDYLNEGNSQEHEEELMQYFHRGNANEVSNNSTTNPKNFLDASQDPHDEHSQGKNEKLSQLRELLAKNLKNQSGSNSIPQNSATNEDTNLPLTNDNLSELNKNVNEGAFKPVNNLSDIVNGSANVPNTHECTKNPLPLPNENGIHIAETTQSILLNSIAPTQLYNGTMNHEPQSPTTRTQQYDFVPISEGCHSPANVRSKSPSGLGPRGSSPSKVAKLVLCGSLQTSPNSHSTVASPFVSPRNTPVPRSRLFPRPIPKHNEKRKRNTLTLGVQDSCSKPFAIPNDQKYVPRTTLNSNIKYCQPMSAPPSPNILTNYKTQLMQSGAITNGSNNMRINFVPNLFRDNINGELTQPLSADPLSSEVSQFFQEPVINYRLHDVSFRSQSVPLKQATLNVGLLSYNNTPVGSIPPTPVPNEFSDFGSLAETCDISKAGLNPETLDKIYDAIDSSNDVLNTAATTNLLNPNQAITNGCDPLPDQQILAEEQIHPFIATNTDMLDRNAQFNDSFAGDAGTGDNVEEFLKRTNSIEFDLSDLVTEKSKYYTSRSVPSTPLPYKRTAPNLQIESRRSRELFTADFNLVSNGISSKSVPSTPQLPEDRSVFSYSNRDYLINGNSVEVICGANQINTVVESDQTLASPLDMLREDILEPLSGPTADLLADFDKIDGPPYVVDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00288599;
90% Identity: iTF_00288599;
80% Identity: -