Basic Information

Insect: Phasia obesa
Gene Symbol: -
Assembly: GCA_949628195.1
Location: OX451218.1:10703914-10719451[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.4e-07 2.2e-05 26.2 1.4 2 23 218 239 218 239 0.97

2 9 1.8e-07 2.7e-05 25.9 0.5 1 23 245 267 245 267 0.98

3 9 1.7e-07 2.6e-05 26.0 0.6 1 23 273 295 273 295 0.98

4 9 9.4e-06 0.0014 20.5 0.5 4 23 306 325 301 326 0.92

5 9 9.6e-05 0.015 17.3 2.9 1 23 331 353 331 353 0.97

6 9 4.8e-05 0.0072 18.3 3.6 1 23 359 382 359 382 0.98

7 9 0.00015 0.023 16.7 2.1 1 23 388 410 388 410 0.98

8 9 8.8e-06 0.0013 20.6 1.1 1 23 415 437 415 437 0.98

9 9 0.004 0.61 12.2 0.3 2 23 444 468 443 468 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.4e-07	2.2e-05	26.2	1.4	2	23	218	239	218	239	0.97
2	9	1.8e-07	2.7e-05	25.9	0.5	1	23	245	267	245	267	0.98
3	9	1.7e-07	2.6e-05	26.0	0.6	1	23	273	295	273	295	0.98
4	9	9.4e-06	0.0014	20.5	0.5	4	23	306	325	301	326	0.92
5	9	9.6e-05	0.015	17.3	2.9	1	23	331	353	331	353	0.97
6	9	4.8e-05	0.0072	18.3	3.6	1	23	359	382	359	382	0.98
7	9	0.00015	0.023	16.7	2.1	1	23	388	410	388	410	0.98
8	9	8.8e-06	0.0013	20.6	1.1	1	23	415	437	415	437	0.98
9	9	0.004	0.61	12.2	0.3	2	23	444	468	443	468	0.94

Sequence Information

Coding Sequence: ATGGAGAGGAATGCATATGCGCACACTATAGCGATTCAGTATCGgccgataaaaaattttaatgggcTTAATGATTCCATTAAAACTAATCTTTCGGCCAACTCGACTAAACTATCGGCCGAAAAAAATTCTGCAGTCTGCGGTGGCCCTAAATCGGTACAATTGCTCGCATCgcgtaaaataagtatttctgaGGAgttgttcCAAGTGCCCGGCTATAATATACCCACCTGTGTAAAGTGTTCTGAACATTTGACTAACAGTGGTAATGGTTTCTATCAGGCAGTAGCTGCCAGTGCTACTGGTCAACCGGCATTGGCGGCAAccgttgctgctgctgctgttgctgctaATAACaccaataataacaacaacaacaacaatagcaataataataataatacaactaACAATAGCAATACAGCGAATAATTTGAATCAACAACAAATGCCtcaacaacaattacaaaactCCACCAATTCGACCAATAGTCTACAGTCGCAGGACGATTCGGAAGAACGAGTGCAACAAACACCACGCCGTCCGCGTAAAAACGGTGTTAATAAAATCCAACAAATCACGATGTCCTCCTATGAATTGGAGAAGACCATTCAACACTTAGATGTGGACTTAATATTTAATGAAGAAGGCTCATGTCCTTTatgcaataaaacattttcaagaaAATCTTCCTTGATAACACACATACGAAATCATGCAGCTGAAAGGAAATTTGTGTGCAATTATTGTAATAAAGgttttACTCAAGCGGCCAATTTAAGAAATCATGAGCGCATACACACCAATGATCGTCCTTATGTTTGTGGAGATTGTGGCAAAACATTTACTCAGATTACAAATCTTAATAATCACAGACGTTTACATACTGGCGAACGTCCCTTTGTTTGCATTGAACCCGAATGTGGCCGTTCATTTGCCCAAGTAACCAACCTAAATAATCATATGAAAACCCACCATAAAGTTCAACAATATTGTTGCAATCAATGCCCGAAAAAGTTCACACAAGTCACCTCGCTCAATCAACATTTGCAAGCTCATGCCGGCATTACGGGCTACTATTGTCCCCGATGTCCGGAGAAGACATTTAAACAACAATCACAGCTACACACTCATATGAAATCGCATGGTCTGCAATATCCATTCGAATGTACAAAATGTGATGAGAAATTCTTGCAACAGGCTCACTTGGAGCAGCATCTGAAAATGCACGATGAGTTCAAATATAAATGCAATATTTGTCCCAGTTCGTTCAATCAGGAATCACTACTTAAGAAACATGAACAACGTCATTTAGAGGGCAGGTACCTCACTTGTCCTGTGGCCAACTGCAATGAGGCCTTTGCTGTTCGCCAACATCTTTCGAAACATTTGTTAAATAGTCATTCGCATACCGAACTACCGCCTCCAAAACGCTCGAAGAAATGCATAACATTACAACCGCCTCAACAGCCTGTCACCATGGTTGGCCAGCCATTGTCCTTGCAACACGCTCCCCAACGTGGTCGTCCCCCtaagaataaaaataagCCAGTTATAAATAATGTAAGTGGTCTTTCGATACCACAGCAAATTAATCAACACctgcaacaacagcagcagcagcagcaacaacaacagcagcagcaacagcagcaacaacaacagcaacaacagttactacaacagcaacagcagcaattATTATTGGGCAATCAAGTTAAAGTTCGTTACATACCCAATAATCAGATCAaatag
Protein Sequence: MERNAYAHTIAIQYRPIKNFNGLNDSIKTNLSANSTKLSAEKNSAVCGGPKSVQLLASRKISISEELFQVPGYNIPTCVKCSEHLTNSGNGFYQAVAASATGQPALAATVAAAAVAANNTNNNNNNNNSNNNNNTTNNSNTANNLNQQQMPQQQLQNSTNSTNSLQSQDDSEERVQQTPRRPRKNGVNKIQQITMSSYELEKTIQHLDVDLIFNEEGSCPLCNKTFSRKSSLITHIRNHAAERKFVCNYCNKGFTQAANLRNHERIHTNDRPYVCGDCGKTFTQITNLNNHRRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYCCNQCPKKFTQVTSLNQHLQAHAGITGYYCPRCPEKTFKQQSQLHTHMKSHGLQYPFECTKCDEKFLQQAHLEQHLKMHDEFKYKCNICPSSFNQESLLKKHEQRHLEGRYLTCPVANCNEAFAVRQHLSKHLLNSHSHTELPPPKRSKKCITLQPPQQPVTMVGQPLSLQHAPQRGRPPKNKNKPVINNVSGLSIPQQINQHLQQQQQQQQQQQQQQQQQQQQQQQLLQQQQQQLLLGNQVKVRYIPNNQIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00716956;
90% Identity: iTF_01376809;
80% Identity: -