Pobe040348.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phasia obesa
Gene Symbol
-
Assembly
GCA_949628195.1
Location
OX451218.1:143331297-143336681[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.7 1.1e+02 5.2 1.5 1 23 269 292 269 292 0.88
2 25 3.3e-07 5.1e-05 25.1 0.9 1 23 298 321 298 321 0.97
3 25 0.00013 0.02 16.9 0.7 2 20 350 368 349 371 0.93
4 25 0.26 39 6.6 2.6 2 23 479 500 478 500 0.97
5 25 1.2 1.9e+02 4.4 1.3 3 19 510 526 509 528 0.96
6 25 0.0013 0.19 13.8 1.5 2 23 545 566 544 566 0.97
7 25 0.04 6.1 9.1 0.9 2 20 579 597 578 600 0.94
8 25 0.49 74 5.7 2.9 1 23 679 702 679 702 0.94
9 25 0.0023 0.34 13.0 0.4 1 21 709 729 709 730 0.95
10 25 0.089 13 8.0 0.2 2 23 742 764 741 764 0.94
11 25 0.00038 0.058 15.5 0.4 2 23 779 800 778 800 0.97
12 25 2.8e-07 4.2e-05 25.3 1.9 1 23 806 828 806 828 0.98
13 25 0.0079 1.2 11.3 1.2 1 23 971 995 971 995 0.96
14 25 1.6 2.4e+02 4.1 1.3 1 23 1032 1055 1032 1055 0.92
15 25 0.012 1.8 10.8 5.0 1 23 1065 1087 1065 1088 0.95
16 25 0.0071 1.1 11.5 3.7 1 23 1095 1117 1095 1117 0.97
17 25 0.045 6.8 8.9 0.2 2 20 1144 1162 1143 1164 0.91
18 25 0.0035 0.53 12.4 4.3 1 23 1217 1240 1217 1240 0.97
19 25 1.2 1.8e+02 4.4 1.7 1 23 1277 1300 1277 1300 0.90
20 25 0.07 11 8.3 6.2 1 23 1332 1355 1332 1355 0.97
21 25 1.3e-06 0.00019 23.2 0.5 2 23 1385 1406 1384 1406 0.95
22 25 6.8e-06 0.001 21.0 0.4 1 23 1412 1434 1412 1434 0.99
23 25 6.3e-05 0.0096 17.9 2.4 1 23 1440 1462 1440 1462 0.97
24 25 5.6e-06 0.00086 21.2 2.3 1 23 1468 1490 1468 1490 0.99
25 25 0.041 6.2 9.1 0.9 1 22 1496 1517 1496 1520 0.90

Sequence Information

Coding Sequence
ATGACGAACGAAATTAGGACTGAATGTTTTATAAATGGGATTCAATACAAATGTCGAACATGCTTTGATCCAGGAAGAACAATCCATTACCTTAGAGATGAGTACAGCAACTCAAAAACTTGGTGTGATTTACTGAAGGATATTGCTCATTTACAGACAAACGAAGATGACTTACTTCCAAAGACAATGTGCTGCAAATGTTCGGCAAAACTTAAAAGTTCCTACGATTTTATACTTCAGGTTCATAGTGTTAACTCGAAATACTCTGAATTATTAGCGAGTTGTAGTGATCCACTTCAGGATGGGGTATCAAATGAACTGGATAGCTTAACAGATTGCTTAGCTGAAACTACAATTGATTTACCCTTATGCCAGTATATTCCAGAAATTAAACTAGAAGAAGATTTTCAAGACTCTTATAAGATTGATTTAAGTAACAACCAAGTTTCAGGGGACAGTGAAGCAAAGTTGGAAAACGAAGGATTACCTGATGCTCAGGATTCTTTAAGAGATATCGGTAACGAAGAATTGCATTCTACTTCTGAGAAATTAGGAgagcacaaaaaatatttaaaaaacagATCTCTTACAGAACGAAGAAGCCAATACCTGGACGATGATACTAATGGCAATGAATATAGCAATGATTCAAACTCATCTGATGAAAGCGATTATGTTCCActtaaaaggttaaaaaaagaaaaaaacaacaaaaatagcaGTAGCAGCAGTCAGCCAATTAAACGGAAAAAGGGTCGACAAGCTCCAGACTATTATGATAAAATCGAGCAAGTTAATGATCGTTTTCTCTGCcttatatgccaaaaaacattttCGTTACGAAAAGATTGTGGTCGACATATAGCATCTATACATTTGCGCCGAACACCTTTTCCTTGTGAAATTTGTGGTCAAAGTTTTACTCGCAAGGACAAGTTACAACGGCATGTTAAACGTATGCATTCCGCTGGCGTAATGTATCCTAATCATAAGGAATGGTTATTTGGTGATCGTTTATATCACAAGCCAGATGCGTGGCTTCTTGTGCAATGTAATTTGTGCGATAAGACTTTTAAAACAACCAAAGAACTTCGTAATCATTTACCAATCCACGGCAATTTGGAAACTCTTCATAAACTAGAAGCAAACAGTGACTTTATCCAACATTTGTTTGGAAGCATAATTGATTTGAATATCGTcaagcaaaatatttgcaaagaaATTCGTGAGGAACAGTGGTTCAAATACTACacagtgttaaataaatattcttatgAAATGTCCATAAGTGATACAGAAAATGAAGATATAGATGAGAACAGTGTGCAGCGTGCCAACAAATACAAATGTGATTTGTGTGCAAAGGAGTTTCTATTTAAATACCAAGTTTTTTGCCATTTAAAGGAGGTTCATAGCGATGAcgaaatttctttgaaatgtaATCTCTGTAAATtggaatttatttcaattaaaatgtatGAACATCATTCGAAAACCCATTGTCGTAATAGGCATAAAGTTTTGCTTTGTGCGCATTGTCCTGCCAAATTTGTTTTCccagaaaatatgaaaaatcacAATTGTGCCACAAAAGTTCAGTTGATCACTCCCCCACCTCCTAAAGAACAAATGACGTGTAATATGTGCGATCGTAAATTTGAAGTAAAAACGAAGTATGAAAAACATTTGGAGACGCATAGAGATGGAAGACCTATATCTACAAAAACTATTATACGTTGTGGCCTTTGTGCACATTCCTTCGAAAAACTACGTAATTTGCGGAAGCACATGCCGTTGCATGCTGATGGCAAGACTGGCATTGATTTTAAAGGCAGTATTTACATAAAACGATTTGAACGTtcaaaatcaattgattttgcTTTACTGCAGCAGGAAATCCAAAATGCATATAGAAAATCCCAAATCAGTCGTTTTTACAGGGCTATCGACAGAGACGGAAATGAATTAGACATTTTAGATTCGGACAGTGACTTGGATGACGCTAGCGTTGATGAAGAAACTTTAAAGAAGGAATACATATGCCAACTTTGCAGTTCAGTTTATAAAAAACGGAAACTTTTATTAAACCATCAACATGAAAAACATAATGGTGTACCTCTACCATTTTCGTGTAAAGATTGTACTCAACAATATGTAAGTAATGATTTGTTACAACAACATTTAATGAGGGATTGCTGGAATGAACACCGTCGGATAGCGCAACAATGTGACTATTGTAATGCTCGCTTTATATGGCCAAATAATCTTCTGAAGCACAAGGAAATTCAGCATAAAAATCATAAACATCCAAAACCACAAAGGGCAAGTACTCTCAAATGTGAGTATTGTGAAAAGGTATTTATATGGCCCAAAGATTTGGTGCGTCATAGAAAAACACACACAGAAGGGAAAAAGTTCACATGTCCACATTGTGATCGTAAATTTCAACGTAAAGACAACTTGCTGGCTCACATTAGAATCCATTGCCCTGATGGCATACCTACTGTTTCTAATCCCGGCAAGAGTATTGACTACATACTGCCACATTTAATAAAGCCCCATGGATGCAAACGCATCAAGTGCATGATCTGTTTTTCCGAACACAACCGTATTCGCGACTTAAGATCTCATCTACGGATACATCGGTATGccattaattttgataaaagaaaagaaatcgaAACTTTGGACGTAATATCGTCTCAACTTTATCCCGATGAACCATTACCTCTGCCAGAAGAGATATTGGTAAAACGTATTGGTAACGATATTGCGGGGGAAAATAATTTGGAACGTTTCTACTCTATAACGAACGAAAATGGCTACGAAGTATCTTTGGATAGTTCTGAAACAGAAAGTGATtctgataatgataatgaacaTGAAGAAGACAAATTATCAAAACGCATTTATAAGTGTGATTTATGCCCTGAATTGAGTTTTAATcgtaaatataaactttttgctCACCAAAATAATAATCATACTTGGGAGGAAGCTCGGCATGTTTGTATACACTGCAATGGACGTTTTCTTTCCTCATATATGCTGCAACTACACTATAAGAATCAATGTAAAAATGCCAAAAAGCGTCATTTTTGTCGCCGCTGTCCCCTTCGTTTTATGTGGAAGAGTAACATGAAGGCTCACATCGTAATGGAGCATGGCCAAGAAATCGATTCAAATCGAGGCCATGAATGTTTTCTTTGTCAAGAAAAGTTTTTCCCTCAAAAGGAACTTAAACGTCATCTGCTAACACACCATTCCGCCGATGCCGAACTTCATTATTGTCTCCTGTGtccaaaaaccttttttaatgtAGAACACCTCAATGATCATTTGAGCCGCCACCGTTTAACCACGACAGATGTCAAGACTGTCGAAAGTTTTATACATTCCACATGCTGGCCACACGGTGAAAAAACGATTAAATGCAAAATGTGTGGCCTAACATTCGAAACAATGGCCCGTCTAAGAGACCATTTTTCAACCAGTAACCCTCAAAACATGTGTGCTAATCAAAATTCCTTAGCAAGTTACTCGGCTACCAATCAAAAGGGATTCGAAATACATTTAGAACTTGATTCCGAAACGGAGATGGAAGATGATATGGAACAAAATAAAGATCATAGAAAGAGTTTATATCCATATAATTGCTGCATGTGTAGTATGTCGTTTAAGAGAAAATACCAAATTGCTCAACATCAGAGATCATTGCATAATTACGAATTGCTAGAGTTAAAGTGTGAACGTTGTATTTTTAGGACAGTGTCACAgAAAGTGTTAGATTATCATAAAGTTACGCAGTGTTTCAATGGTGAAAAGCAATTTGATTGTAAAGAGtgcaaattcaaatttatgtGGCAGGAAAATCTCGAAAGTCATTTTTCTCTATTTCATTCTCCAAAGGATTTGTTGAAAACAAGCGATATCGTTAATGTGGCGCCTTCTATTGAGCCTGTACCAAGCAATAGCAAAAACGATACCAATATTTTTGAATGCATGGATTGTCACCGCCGCTACAATCGTAAAGATCGTTATAAAGCTCATTTCAAGAAATTCCACAACAATGAATTGCATTTATCACCAGACAAAAGTATTTCTAATAGAAAAGTTCGCAAACAAACcgaacaaaaaattgaaaaaaagtttttgtgtgCTTTTTGCGGCTTAgctttttcaaacaattcaaaTCTAACGGTACACATGAGAAGGCACACGGGCGAGAAACCCTTCAAGTGTGATCTATGTGAAATGGCCTTTCCACGTACATCAGATTTGCAGGCCCATAGACGCACACATACCGGCGAACGtccatttaaatgtatttactgCGACAAATCCTTTTCACGacaatacaaattaaatgttCATAATCGCATACACACCGGCGAACGTCCTTACCAGTGTACGTTTTGTCAGAAATCGTTTATACAGTCGAACGACTTGACACTGCATTTAAGGCGTCATACAGGTGAAAGACCTTATATGTGTGAGATTTGCGGAGAGGATTTTATATGTGCTACATCCCTTAAACAACATCGTAACTCGAAGGGGCATCAGGAAGAAAAAATTGACTTAAAAATGTGTGCGCAACAGTTGACACAATTCGATATGAAATTCTAG
Protein Sequence
MTNEIRTECFINGIQYKCRTCFDPGRTIHYLRDEYSNSKTWCDLLKDIAHLQTNEDDLLPKTMCCKCSAKLKSSYDFILQVHSVNSKYSELLASCSDPLQDGVSNELDSLTDCLAETTIDLPLCQYIPEIKLEEDFQDSYKIDLSNNQVSGDSEAKLENEGLPDAQDSLRDIGNEELHSTSEKLGEHKKYLKNRSLTERRSQYLDDDTNGNEYSNDSNSSDESDYVPLKRLKKEKNNKNSSSSSQPIKRKKGRQAPDYYDKIEQVNDRFLCLICQKTFSLRKDCGRHIASIHLRRTPFPCEICGQSFTRKDKLQRHVKRMHSAGVMYPNHKEWLFGDRLYHKPDAWLLVQCNLCDKTFKTTKELRNHLPIHGNLETLHKLEANSDFIQHLFGSIIDLNIVKQNICKEIREEQWFKYYTVLNKYSYEMSISDTENEDIDENSVQRANKYKCDLCAKEFLFKYQVFCHLKEVHSDDEISLKCNLCKLEFISIKMYEHHSKTHCRNRHKVLLCAHCPAKFVFPENMKNHNCATKVQLITPPPPKEQMTCNMCDRKFEVKTKYEKHLETHRDGRPISTKTIIRCGLCAHSFEKLRNLRKHMPLHADGKTGIDFKGSIYIKRFERSKSIDFALLQQEIQNAYRKSQISRFYRAIDRDGNELDILDSDSDLDDASVDEETLKKEYICQLCSSVYKKRKLLLNHQHEKHNGVPLPFSCKDCTQQYVSNDLLQQHLMRDCWNEHRRIAQQCDYCNARFIWPNNLLKHKEIQHKNHKHPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRKFQRKDNLLAHIRIHCPDGIPTVSNPGKSIDYILPHLIKPHGCKRIKCMICFSEHNRIRDLRSHLRIHRYAINFDKRKEIETLDVISSQLYPDEPLPLPEEILVKRIGNDIAGENNLERFYSITNENGYEVSLDSSETESDSDNDNEHEEDKLSKRIYKCDLCPELSFNRKYKLFAHQNNNHTWEEARHVCIHCNGRFLSSYMLQLHYKNQCKNAKKRHFCRRCPLRFMWKSNMKAHIVMEHGQEIDSNRGHECFLCQEKFFPQKELKRHLLTHHSADAELHYCLLCPKTFFNVEHLNDHLSRHRLTTTDVKTVESFIHSTCWPHGEKTIKCKMCGLTFETMARLRDHFSTSNPQNMCANQNSLASYSATNQKGFEIHLELDSETEMEDDMEQNKDHRKSLYPYNCCMCSMSFKRKYQIAQHQRSLHNYELLELKCERCIFRTVSQKVLDYHKVTQCFNGEKQFDCKECKFKFMWQENLESHFSLFHSPKDLLKTSDIVNVAPSIEPVPSNSKNDTNIFECMDCHRRYNRKDRYKAHFKKFHNNELHLSPDKSISNRKVRKQTEQKIEKKFLCAFCGLAFSNNSNLTVHMRRHTGEKPFKCDLCEMAFPRTSDLQAHRRTHTGERPFKCIYCDKSFSRQYKLNVHNRIHTGERPYQCTFCQKSFIQSNDLTLHLRRHTGERPYMCEICGEDFICATSLKQHRNSKGHQEEKIDLKMCAQQLTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01427623; iTF_01174425;
90% Identity
-
80% Identity
-