Tsol020015.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thelaira solivaga
Gene Symbol
-
Assembly
GCA_947397855.1
Location
OX377612.1:75830742-75835958[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.64 39 5.2 1.5 1 23 258 281 258 281 0.88
2 25 5.3e-06 0.00032 21.2 1.3 1 23 287 310 287 310 0.96
3 25 0.0083 0.51 11.1 0.9 2 20 340 358 339 361 0.92
4 25 0.0012 0.073 13.8 1.2 1 23 438 461 438 461 0.96
5 25 0.086 5.2 7.9 1.0 2 23 469 490 468 490 0.97
6 25 0.00039 0.024 15.3 1.4 2 23 535 556 534 556 0.97
7 25 0.0076 0.46 11.2 0.4 2 20 569 587 568 590 0.94
8 25 0.26 16 6.4 3.1 1 23 669 692 669 692 0.94
9 25 0.0043 0.26 12.0 0.2 1 20 699 718 699 720 0.95
10 25 0.081 4.9 8.0 0.2 2 23 732 754 731 754 0.94
11 25 0.00035 0.021 15.5 0.4 2 23 769 790 768 790 0.97
12 25 2.5e-07 1.5e-05 25.4 1.9 1 23 796 818 796 818 0.98
13 25 8.6 5.2e+02 1.7 7.3 1 23 961 984 961 985 0.95
14 25 1.4 87 4.1 1.3 1 23 1022 1045 1022 1045 0.92
15 25 0.011 0.65 10.8 4.6 1 23 1055 1077 1055 1078 0.95
16 25 0.0085 0.52 11.1 3.6 1 23 1085 1107 1085 1107 0.97
17 25 0.016 0.95 10.3 0.2 2 19 1134 1151 1133 1153 0.94
18 25 0.0032 0.19 12.4 4.3 1 23 1207 1230 1207 1230 0.97
19 25 0.019 1.2 10.0 1.6 1 23 1267 1290 1267 1290 0.98
20 25 0.064 3.9 8.3 6.2 1 23 1322 1345 1322 1345 0.97
21 25 5.9e-07 3.6e-05 24.2 0.8 2 23 1375 1396 1374 1396 0.95
22 25 1.8e-06 0.00011 22.7 0.4 1 23 1402 1424 1402 1424 0.99
23 25 4.8e-05 0.0029 18.2 2.0 1 23 1430 1452 1430 1452 0.97
24 25 5.1e-06 0.00031 21.2 2.3 1 23 1458 1480 1458 1480 0.99
25 25 0.025 1.5 9.6 0.7 1 22 1486 1507 1486 1510 0.90

Sequence Information

Coding Sequence
ATGACCAGCGGTGTGAAAAAAGAATGTTTTATTAACGGAGTACGTTATAAGTGTCGGACCTGTTTCGATCCGGGACGAACAGTTTACTCTATTAAAGATGAGTGCAGAGGCACAAAAGCGTTGAGCGATTTATTAAAGGATGTTACCCAGTTGGAGACAAAAGACGATGATTTACTTCCTCATACAATGTGCTGCAAATGCTTAGAAAAACTTAAAAGTTCCTACGATTTTGTAGTCCAGGTTCATGATGTTAATACAAAATACAATCAATTCTTAGCAAGTTGTAATGATCCGCTACAAGATGGTGCTTCAAATGAACTGGATAATTTAATCGATTGTTTAGCAGAGTCTACTATTGATTTACCATTGAACCGGTATATGCCTGAAATAAAGGTAGAGGAAGATTTTGCAGAATCTTATAAAATGGATTTAAGCAAGTATCAAATGCTAGAAGATAGTGGAGCTAAATTGGAAAACGAAAGTATAATAGAGGCTCAGGATTCCTTGGCGAATATTACCAGCGAAAGCCCTAAACCAACCAGATCTTTAAAAGAACGATTACATAAAAATTTAGATGAAGATTACAACGAAAACGATTACAAAAATGAGTCCAGCTCATCTTCCGATGAAAGCGATTATTTACCACTTAAGAGATTGAAAAAAGATAAAGACAACAAAAGTAGTAACAATAGCAATAGTCAACCAGTTAAACGGAAAAAGGGTCGACAGGCGCCTGATTACTATGATAAAATCGAAAAAGTTAATGATCGTTTTTTGTGCCTCATATGCCAAAAAACATTCTCATTACGAAAAGATTGTGGTAGGCATATTGCTTCTATACATTTGCAACGAACGCCATTCGCTTGCGAAATTTGCAGCCAAAGTTTTAGTCGAAAGGATAAGTTACAGCGGCACGTTAAACGCATGCATTCAGGAGGAATAGTTTATCCGCCAAATCATAAGGAATGGTTATTTGGTGATCGCTTATACTATAAACCAACATCTTGGCTCATTGTGCAATGTAAACTATGCGATTCGGTTTTTAAAACAACCAAAGAACTTCGTCAGCATTTACCGAAGCACGGTAATTTAGATACTCTACATAAAATAGAGTTGAGCAGTGACATTATTCAGCATTTGTTTGGAAATATGATCGATTTAGATAGTGTTAAAGAAAGTATTTGCAAAGATATTCGTGAGGAAAATTGGTTTAAATACTATACAGTGTTAAATAAATATTCCTATGAAATGTCTATAAGCGATACGGAAACGGAAGATCTTGAAGAAACTTCTACTGATAACGCCAACATATACAAATGTGATTTGTGTGCTAAGGTGTTTTCATTTAAGTACCAAGTTTTCTCACATTTGAAAGAGATTCATAGTAATGATGAAATTTCTTTGAAATGTAACCTTTGTAAACTGGAATTTGTTTCCATCAAAATGTATGAACAACACTCGAAAACGCACTGTCGTAACAGGCATAAAGTTTTGCTTTGTGCACATTGTCCCGCCAAATTTGTCTGGCCAGAAAATATGAAAAATCATAAATGTGCAACTAAAATTCAATTGATTCCACCACCACCTTCTAAGCCGCAAATGAAATGCAATATATGTGATCGTAAATTTGAGGTGAAAACTAAATATGAAAAACATTTGGAGACTCACAGAGACGGAAGAACTGTATCAGCAAAAACTATAATACGGTGTGGTCTGTGCTCATATTCATTTGAAAAACTACGAAACTTGCGACAACACATGCCGTTGCATGCTGACGGTAAAACTGGCATTGACTTTAATGGTAGTATTTACGTGAAACGTTTCGAACGTTCGAAATCAATTGATTTTGCATTACTGCAGCAAGAAATACAGAATGCTTATAGAAAAAACCAAATAAGTCGATTTTACAGGGCCATCGATAGGGATGGCAATGAAATGGACATTTTAGATTCAGATACTGATGAAGAAGAGACAAATATCAGTGAAGAAATTTTCAAAGATGAATATATATGTCAACTTTGCAATGATATATTTAAAAAACGAAAACTTTTGTTGAAGCATCAACATGAAAAGCATATTGGTGTTCCACTACCATTCACATGTGAAGACTGTACTCAACAATATGTAAGTAATGACTTATTACAACAACATTTGGTGAGAGATTGCTGGAATGAACACCGCCGCATAGCACAGCAATGTGACTATTGTAATGCTCGTTTTATATGGCCAAATAATCTTCTAAAGCACAAGGAAATTCAGCACAAAAATCAAAAACACCCGAAACCTCAAAGGGCCAGCACACTAAAATGTGAATATTGCGAAAAAGTATTTATATGGCCCAAGGATTTAGTGCGACACAGGAAAACACATACTGAAGGGAAAAAATTTACATGTCCACATTGCGATCGCAAATTTCAGCGGAAAGACAATCTATTGGCTCACATTAGAATACATTGTCCTGATGGTATTCCCACGGTGTCAAATCCTGGTAAAAGTATCGACTATATACTGCCACATTTAATAAAGCCGCATGGTTGTAAACGCATCAAGTGCATGATTTGTTTTTCCGAGCACAACCGTATACGTGACTTGAGATCTCATTTAAGAACACACCGTTATATTGTCAATTTCGATAAAAGAAAAGAATTTGAGACATTGGATGTAATATCATCCCAACTCTATCCCGATGAACCATCAACTCTGACAGAAGAAATGTTAGTAAAACGTATTGTTGTTGATATAGCGGCAGAAAATAATTTGGAACGTTTTTACTCTATAACTAATGAAAACGGCTATGAAGTTTCTTTAGATAGTTCTGAAACGGAAAGCGATTCGGACGATAATGAACCAGATGCGGAAAACGTGAAGTCGAAACGTATTTATAAATGTGATCTTTGTCCTCATTTGCATTTTAATCGTAAATATAAAGTTTTTGCCCATCAAAATAATCATCATACGTGGGAGGAGGCCCGTCACATTTGTATACACTGCAATGGAAGATTTCTTTCGTCATATTTGCTGCAACTGCACTATAAGGAACAATGTAAAAATAACAAAAAACGTCATTTTTGTCGCCGCTGTCCTCTACGTTTCATGTGGAAAAGTAATATGAAAGCCCACATCGTAATGGAACACGGTCACGAAATCGATTCTAATCGCGGCCATGAATGTTTTCTATGCCAAGAAAAGTTTTTCCCCCAAAAAGAATTGAAACGTCACTTGATAACACATCATTCTGCTGATGCCGAACTACATTATTGCCTCCTTTGTCCAAAAACATTCTTTAGCGTAGAACATCTTAATGATCACTTAAGTCGACATCGTTTGACGACTGGAGATGTCAAGAGTGTTGAAAGTATAATACATTCCACGTGCTGGCCTAATGGTGAAAAGGCAATTAAATGCAAAATATGTGAGCTAAGTTTTGATACAATGGTTAATTTGAAAGAACATTTTTCACCCATAAATCATCAAAATGTATGCGGAAATGAATATTCTTTGGCAAGTTATTCAGTAACTAATCAAAAGGGATTCGAACTACATTTGGAACTAGATTCTGAAACAGAAATAGAAGACGAACTGGAACATAACAAAGATCACAAAAAGAGTTTATATCCCTATAATTGCTGTATGTGCAGTATGTCATTTAAGAGAAAGTATCAAATAGCCCAACATCAGCGATCACTGCACAATTACGAATTGCTTGCGTTAAAGTGTGAACGTTGTATTTTCAGAACAGTCTCACAGaaagtgttagattatcataaggctactcaatgttttaatgatgaaaaacaattcaaatgcgagcagtgcaaattcaaattcatgtggcaagaaaatcttgaaagtcacatttctacgtttcatgctacaaaagaTTTATCCAAAACTAGTGATATCATTTATATTTCAACTTCTAATGAACCTGTACCAACCAACAACAAAAACGATACCAATATTTTCGAATGTATGGATTGTCATCGTCGATATAATCGTAAAGATCGTTATAAGGCACATTTTAAAAAGTTTCATAATAATGAATTACATCTGACATCAGATAAGAACTTATCTAATACTAAAGTGCGAAAGCAATCCACACAAAAAATGGAaaagaactttttatgtgcattttgtggtctttctttttcaaacaattcaaaccttacagtacacatgagaagacacacaggggaaaaaccattcaaatgtgatctttgtgacatggcttttccacgtacatctgacttgcaggcccaccgtcgcacacatactggggaacgtccttttcaatgtatttactgcgataaatcattttcgcgtcagtacaagctaaatgttcacaatcgaatacataccggtgaacgtccataccagtgtacgttttgtcaaaaatcatttattcaatctaacgatttaacactacatttacggcgtcatacaggtgaacggccctatatgtgtgatatttgcggtgaaggctttatatgtgctacatctctaaaacaacatcgcaattcaaagggacatcaggaagaaaaaattgatttaaaaatgtgtgtacaacagttcacacaatttgatatgaaattctaa
Protein Sequence
MTSGVKKECFINGVRYKCRTCFDPGRTVYSIKDECRGTKALSDLLKDVTQLETKDDDLLPHTMCCKCLEKLKSSYDFVVQVHDVNTKYNQFLASCNDPLQDGASNELDNLIDCLAESTIDLPLNRYMPEIKVEEDFAESYKMDLSKYQMLEDSGAKLENESIIEAQDSLANITSESPKPTRSLKERLHKNLDEDYNENDYKNESSSSSDESDYLPLKRLKKDKDNKSSNNSNSQPVKRKKGRQAPDYYDKIEKVNDRFLCLICQKTFSLRKDCGRHIASIHLQRTPFACEICSQSFSRKDKLQRHVKRMHSGGIVYPPNHKEWLFGDRLYYKPTSWLIVQCKLCDSVFKTTKELRQHLPKHGNLDTLHKIELSSDIIQHLFGNMIDLDSVKESICKDIREENWFKYYTVLNKYSYEMSISDTETEDLEETSTDNANIYKCDLCAKVFSFKYQVFSHLKEIHSNDEISLKCNLCKLEFVSIKMYEQHSKTHCRNRHKVLLCAHCPAKFVWPENMKNHKCATKIQLIPPPPSKPQMKCNICDRKFEVKTKYEKHLETHRDGRTVSAKTIIRCGLCSYSFEKLRNLRQHMPLHADGKTGIDFNGSIYVKRFERSKSIDFALLQQEIQNAYRKNQISRFYRAIDRDGNEMDILDSDTDEEETNISEEIFKDEYICQLCNDIFKKRKLLLKHQHEKHIGVPLPFTCEDCTQQYVSNDLLQQHLVRDCWNEHRRIAQQCDYCNARFIWPNNLLKHKEIQHKNQKHPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRKFQRKDNLLAHIRIHCPDGIPTVSNPGKSIDYILPHLIKPHGCKRIKCMICFSEHNRIRDLRSHLRTHRYIVNFDKRKEFETLDVISSQLYPDEPSTLTEEMLVKRIVVDIAAENNLERFYSITNENGYEVSLDSSETESDSDDNEPDAENVKSKRIYKCDLCPHLHFNRKYKVFAHQNNHHTWEEARHICIHCNGRFLSSYLLQLHYKEQCKNNKKRHFCRRCPLRFMWKSNMKAHIVMEHGHEIDSNRGHECFLCQEKFFPQKELKRHLITHHSADAELHYCLLCPKTFFSVEHLNDHLSRHRLTTGDVKSVESIIHSTCWPNGEKAIKCKICELSFDTMVNLKEHFSPINHQNVCGNEYSLASYSVTNQKGFELHLELDSETEIEDELEHNKDHKKSLYPYNCCMCSMSFKRKYQIAQHQRSLHNYELLALKCERCIFRTVSQKVLDYHKATQCFNDEKQFKCEQCKFKFMWQENLESHISTFHATKDLSKTSDIIYISTSNEPVPTNNKNDTNIFECMDCHRRYNRKDRYKAHFKKFHNNELHLTSDKNLSNTKVRKQSTQKMEKNFLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCDMAFPRTSDLQAHRRTHTGERPFQCIYCDKSFSRQYKLNVHNRIHTGERPYQCTFCQKSFIQSNDLTLHLRRHTGERPYMCDICGEGFICATSLKQHRNSKGHQEEKIDLKMCVQQFTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01177146;
90% Identity
-
80% Identity
-