Pfun023253.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phania funesta
Gene Symbol
-
Assembly
GCA_963932375.1
Location
OZ010655.1:90033692-90040299[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.64 58 5.2 1.5 1 23 268 291 268 291 0.88
2 25 2.8e-07 2.6e-05 25.2 0.8 1 23 297 320 297 320 0.97
3 25 0.0028 0.26 12.6 0.7 2 20 350 368 349 371 0.92
4 25 0.0051 0.47 11.8 1.8 1 23 448 471 448 471 0.96
5 25 0.12 11 7.5 0.8 2 23 479 500 478 500 0.97
6 25 0.00046 0.042 15.1 1.1 2 23 544 565 543 565 0.97
7 25 0.29 27 6.3 0.7 2 20 578 596 577 599 0.94
8 25 0.016 1.5 10.2 3.0 1 23 676 699 676 699 0.95
9 25 0.0013 0.12 13.6 0.4 1 21 706 726 706 727 0.95
10 25 0.08 7.4 8.0 0.2 2 23 739 761 738 761 0.94
11 25 0.00035 0.032 15.5 0.4 2 23 776 797 775 797 0.97
12 25 2.5e-07 2.3e-05 25.3 1.9 1 23 803 825 803 825 0.98
13 25 0.079 7.2 8.0 3.3 1 23 967 991 967 991 0.96
14 25 0.97 89 4.6 0.4 3 23 1030 1051 1029 1051 0.94
15 25 0.0087 0.8 11.1 4.5 1 23 1061 1083 1061 1084 0.95
16 25 0.0093 0.85 11.0 3.7 1 23 1091 1113 1091 1113 0.97
17 25 0.0024 0.22 12.8 0.2 2 19 1140 1157 1139 1159 0.95
18 25 0.0032 0.29 12.4 4.3 1 23 1213 1236 1213 1236 0.97
19 25 0.068 6.3 8.2 1.1 1 23 1273 1296 1273 1296 0.97
20 25 0.064 5.9 8.3 6.2 1 23 1327 1350 1327 1350 0.97
21 25 5.8e-07 5.4e-05 24.2 0.8 2 23 1380 1401 1379 1401 0.95
22 25 6.1e-06 0.00056 21.0 0.4 1 23 1407 1429 1407 1429 0.99
23 25 5.7e-05 0.0052 17.9 2.4 1 23 1435 1457 1435 1457 0.97
24 25 1e-05 0.00096 20.2 4.3 1 23 1463 1485 1463 1485 0.99
25 25 0.025 2.3 9.6 0.7 1 22 1491 1512 1491 1515 0.90

Sequence Information

Coding Sequence
ATGGCAAGCGATGTAAAAACTGAATGCGTTATAAATGGAGTTCGTTATAAATGTCGAACATGCTTTGATCCTGGGCGAATAATCCACTCCATTCAAGATATGTGCAGCAACTCAAAAACTTggtttgatttattgaaagacaTTGCTCTGCTAGAGataagCGAGGATGATTTACTTCCCAAAACGATGTGCTGCAAGTGTTCGGTAAGACTCAAAAGTTCCTACGACTTTATACTTCAGGCTCAGGATGTGAATACGAAATACTCGCAATTGTTAGCGAATTATAATGATTCACTATACAAGATTTCAAATCCACTAGATAACTCAACCGATTGCTTAGCTGAATCTACAATTGATTTACCATTGAATCAATATATGCCAGAAATTAAGCTAGAGGAAGATTTTCCCGACCATTATGAAAATGCTTTGAGTGACAATCGGTTGCCAGAGGACAGTGAATCCATATTAAAAAACGAAGATTTAACAGAGGCGCATGACTCTTTAGCGGATAATGATTCTGAATCCTTAATCCGAACTTCAGTGCAGTTATggaatcacaaaaaatatttaaataatagATCTTCAAAAAGAAGAATTTCAGGCTTAGACGACGATCATAATGACATTGATTATAGGGGTGAAATCAGctCATCATCTAATGAAAGTGATTATATGCCActtaaaaggtttaaaaaagaaaaaatcaacatAAGTGGCAGTAGCAGCGGtcTGCCAATCAAACGGAAGAAAGGCCGTCAAGCTCCTGACTATTatgataaaattgaaaagatCAACGATCGTTTTCTATGTCTCATATgccaaaaaacattttcattacgAAAAGATTGTGGCCGACATATAGCATCAATACATTTGCGTCGAACACCGTTCCCTTGTGAAATATGTGGACAAAGTTTTAGTCGCAAGGACAAGTTACAAAGGCACGTTAAACGTATGCATTCAGGTGGATTGGTGTATCCACCTAATCATAAGGAATGGCTATTTGGTGATCGTTTATACTACAGGCCGTCTTCTTGGCTTCTTGTACAGTGTAAATTGTgcgatacaatttttaaaacaactaagGAACTACGCCAGCATTTACCAAGCCATAGTAATTTAGACACTCTCCAGAAAATTGAATTGAGCAACAGAGTCGTCCAACATTTGTTTGGCAGTATGATTGATTTAAATATCGTCAAAGAAAGTATATGCAAAGATATTCGTGAAGAACATTGGTTTAAATACTACACCGTGTTAAATAAACATTCGTATGAAATGTCCATAAGTGATACGGAATTTGAAGATATGGAAGAGAAATCTGAAGAATATGCGAGCAAATACAAGTGCGATTTGTGTGCTAAGGAGTTTTCATTTAAGTACCAAGTTTTCTCCCACCTAAAGGAATCTCATAGTGAAAgtgaaatttctttgaaatgtaATCTTTGTAAATTGGAATTCATTTCCATTAAAATGTACGAACAACATTCAAACACCCACTGTCGCAATAGGCATAAAGTTTTGCTTTGTGGGCATTGCCCAGCCAAGTTTGTTTGGcccgaaaatatgaaaaatcacAACTGTGccacaaaaattcaattgatcCCACCCACACCTAAAAAACAAATGAAGTGCGATATATGTGATCGTAAATTTgaagtaaaaactaaatatgaaaaacatttgGAGACGCATAGCGATGGAAGGACTGTGTCCGCCAAAACTATAATACGGTGTGGTCTTTGTGCACATTCCTTTGATAAACTACGATATTTGAGACAACACATGCCTTTGCATGCTGACGGGAAGACTGGCATAGACTTTAAAGGCAGTATTTACGTAAAACGTTTCGAACGTTCGAAATCAATTGATTTTGCTCTATTGCAGCAGGAAATACAAAATGCTTATAGAAAATCTCAAATCAGTAGATTTTACAGGGCCATCGACAGGGATGGCAATGAAATGGACATTTTAGATTCGGACAGTGACACAGATATATCAAATGAAGAAACACTAAAAAAGGAATACACTTGTCAACTTTGCAGTGcagtatttaaaaaacgaaagcTTTTATTAAACCATCAACATGAAAAACATAACGGCGTACCTTTACCTTTTACGTGTAAAGACTGTACTCAACAATATGTAAGTAATGATTTGCTACAACAACATTTAATGAGGGATTGCTGGAATGAACATCGGCGAATAGCTCAACAATGTGACTATTGTAATGCTCGTTTTATATGGCCAAATAATCTTTTGAAGCACAAGGAAATTCAGCATAAAAGTCAGAAACATCCAAAACCTCAAAGAGCTAGTACTCTCAAATGTGAATATTGTGAAAAAGTATTCATATGGCCCAAAGATTTGGTGCGTCACAGAAAAACGCATACTGAGGGGAAAAAATTCACATGTCCACATTGTGATCGCAAATTTCAGCGAAAAGACAATTTGCTGGCTCACATTAGAATACATTGCCCCGATGGAATGTCCACTATATCAAATCCCGGTAAAAGTATCGATTACATACTGCCACATTTAATAAAGCCGCATGGATGCAAACGCATCAAGTGCATGATATGCTTTTCCGAACACAATCGTATACGGGACTTAAGATCTCATTTGCGAACACATCGGTATGCtgttaattttgataaaagaaaagaagtcGAAAGCTTGGATCTAATATCATCTCAACTCTACCCTGATGAACCATTACCTTTAACAGAAGAGGTATTGATAAAACGTATTGGTGTTGATATTTCTGCAGGAAATAATTTGGAGCGTTTTTACTCGATAACAAATGAAAATGGGTACGAGGTTTCTTTGGACAGTTCTGAAACGGAAAGCGATTCTGATGATAATGAAGAAGATGAAGTTGATAAGTCCAAACGAATTTATAAATGTGATTTATGCCCTCAATTGAGTTTTAATCGTAAATATAAACTCTTCGCGCACCACAACAATCAACACACATGGGAGGAAGCCCGTCACATTTGTATTCACTGCAATGGGAGATTTCTTTCGTCATATATGCTACAACTGCACTATAAGGATCAatgtaaaaataccaaaaaacgtaatttttgtcGTCGCTGCCCTTTGCGTTTCATGTGGAAAAGTAATATGAAGGCTCACATCGCAATGGAACATGGCCACGAAATTGATTCGAATCGAGGTCATGAATGTTTTCTTTGTCAAGAAAGGTTCTTTCCTCAAAAAGAACTTAAACGTCACTTGATAACACACCATTCCGCGGATGCTGAGCTTCATTATTGCCTCCTGTGCccaaaaactttctttagcATAGAACATCTCAATGATCATTTGAGTCGCCATCGTTTGACCACAGCGGATGTTAAGACCGTTGAAAGTATTATACATTCCACATGTTGGCCAAACGgtgaaaaaacaattaaatgcaaaatgtgTGGCTTAACATTTGAAACAATGGCCAGTCTAAGAAAGCACTTTTCCCCCGAGAACCCTCAAAACTTATGCGCCAATCAACATTCGCTAGCAAATTACACGGCTACTAATCAAAAGGGATTCGAGCTACATTTCGAACTAGATTCTGAAACAGAAATGGAAGACAACTtggaagaaaacaaaagtaataaaaatagtttatatcCATACAATTGCTGCATGTGTAGTATGTCGTTTAAAAGGAAATACCAAATCGCACAACATCAACGATCATTGCATAATTACGAGCTGTTAGCCTTGAAGTGTGAACGATGTATTTTTAGGACAGTGTCACAGaAAGTCTTAGATTATCATAAAGCAACGCAGTGTTTCAACGCTGAAAAGCGATTCGAGTGTAGACaatgcaaatacaaatttatgtggGAAGAAAATCTTGAAAATCATATATCTACATTTCATACTTCAAAAAATATGTCCAAACCAACTGATCTCATTTACTGCGCTTCCAACGAACCAGTACCAACGTTTAACAAAAACGATACCAACATTTTCGAATGTATGGACTGTCACCGTCGATACAATCGTAAAGATCGTTATAAagctcattttaaaaaattccacaacAATGAGTTGCAGTTAACTTCAGACAAAGATATTTCCAATTTAAAAGTTCGTAAACAGCCCGGttcaaaaatggaaaagaaatttttgtgcGCCTTTTGTGGACTTTCCTTTTCAAACAATTCAAATCTTACGGTACACATGAGAAGACACACGGGAGAAAAACCATTCAAATGTGATCTTTGTGAAATGGCCTTTCCACGGACATCTGATTTACAGGCCCATCGACGCACACATACTGGCGAACGaccttttaaatgtatttactGCGACAAATCATTTTCGCGacaatacaaattaaatgttCACAATCGCATACATACCGGCGAACGCCCCTACCAGTGTACATTTTGCCATAAATCATTTATACAATCGAACGATTTGACACTACATTTACGGCGTCATACGGGTGAAAGGCCTTATATGTGTGACATTTGTGGTGAAGGTTTTATATGCGCAACATCTCTGAAGCAACACCGTAATTCGAAGGGACATCAAgaacaaaaaattgatttaaaaatttgtatgcaacAGTTAACACAATTTGACATGAAATTCTAA
Protein Sequence
MASDVKTECVINGVRYKCRTCFDPGRIIHSIQDMCSNSKTWFDLLKDIALLEISEDDLLPKTMCCKCSVRLKSSYDFILQAQDVNTKYSQLLANYNDSLYKISNPLDNSTDCLAESTIDLPLNQYMPEIKLEEDFPDHYENALSDNRLPEDSESILKNEDLTEAHDSLADNDSESLIRTSVQLWNHKKYLNNRSSKRRISGLDDDHNDIDYRGEISSSSNESDYMPLKRFKKEKINISGSSSGLPIKRKKGRQAPDYYDKIEKINDRFLCLICQKTFSLRKDCGRHIASIHLRRTPFPCEICGQSFSRKDKLQRHVKRMHSGGLVYPPNHKEWLFGDRLYYRPSSWLLVQCKLCDTIFKTTKELRQHLPSHSNLDTLQKIELSNRVVQHLFGSMIDLNIVKESICKDIREEHWFKYYTVLNKHSYEMSISDTEFEDMEEKSEEYASKYKCDLCAKEFSFKYQVFSHLKESHSESEISLKCNLCKLEFISIKMYEQHSNTHCRNRHKVLLCGHCPAKFVWPENMKNHNCATKIQLIPPTPKKQMKCDICDRKFEVKTKYEKHLETHSDGRTVSAKTIIRCGLCAHSFDKLRYLRQHMPLHADGKTGIDFKGSIYVKRFERSKSIDFALLQQEIQNAYRKSQISRFYRAIDRDGNEMDILDSDSDTDISNEETLKKEYTCQLCSAVFKKRKLLLNHQHEKHNGVPLPFTCKDCTQQYVSNDLLQQHLMRDCWNEHRRIAQQCDYCNARFIWPNNLLKHKEIQHKSQKHPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRKFQRKDNLLAHIRIHCPDGMSTISNPGKSIDYILPHLIKPHGCKRIKCMICFSEHNRIRDLRSHLRTHRYAVNFDKRKEVESLDLISSQLYPDEPLPLTEEVLIKRIGVDISAGNNLERFYSITNENGYEVSLDSSETESDSDDNEEDEVDKSKRIYKCDLCPQLSFNRKYKLFAHHNNQHTWEEARHICIHCNGRFLSSYMLQLHYKDQCKNTKKRNFCRRCPLRFMWKSNMKAHIAMEHGHEIDSNRGHECFLCQERFFPQKELKRHLITHHSADAELHYCLLCPKTFFSIEHLNDHLSRHRLTTADVKTVESIIHSTCWPNGEKTIKCKMCGLTFETMASLRKHFSPENPQNLCANQHSLANYTATNQKGFELHFELDSETEMEDNLEENKSNKNSLYPYNCCMCSMSFKRKYQIAQHQRSLHNYELLALKCERCIFRTVSQKVLDYHKATQCFNAEKRFECRQCKYKFMWEENLENHISTFHTSKNMSKPTDLIYCASNEPVPTFNKNDTNIFECMDCHRRYNRKDRYKAHFKKFHNNELQLTSDKDISNLKVRKQPGSKMEKKFLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCEMAFPRTSDLQAHRRTHTGERPFKCIYCDKSFSRQYKLNVHNRIHTGERPYQCTFCHKSFIQSNDLTLHLRRHTGERPYMCDICGEGFICATSLKQHRNSKGHQEQKIDLKICMQQLTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01177146;
90% Identity
-
80% Identity
-