Pbuc024704.1
Basic Information
- Insect
- Phalera bucephala
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905147815.1
- Location
- LR990619.1:31084507-31107218[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.31 1.6e+04 -3.7 0.3 256 279 84 106 67 110 0.37 2 3 7.2e-79 3.8e-74 251.2 27.0 1 298 126 410 126 412 0.89 3 3 0.044 2.3e+03 -0.9 6.9 128 169 432 473 416 486 0.44
Sequence Information
- Coding Sequence
- ATGGGGCATCGATCCGAGATGGCCACACCTGACAATAGCGACGAGGAAAGCGGCGACGCTTTTACCGACGGTGACTTCGGGGATTCTGATGATGAGACCATCGTGGAACGGCGTGATGAAACCAACCCATCACATATTCCCCTCAACGAAACCGTAAACGAAGGGGTTCAGAAAACAAATGTGACAACTAACGGTCATTCTCTCGGTCTCGATTCAGTTGAGAAGCAGAATGAACAACCTAAATTGAATGGACGTAAGAATAGTGAAAATCAATCGAGCGATGTAGAAAACCTTGTGATATCCGATCTACGAAGAGATTCTCACAGCGAGCAAAGTCCTTCAATAGTCGGCATTCTCGGCGATCAACAGAACCATGCGGAGCAGAGGTTAGCAGCGCGTCGCGCTGCTCGGGCAGAGGCGCGGGAAATTCGCATGCGCGAGCTAGAGAGGCAGCAGCGCGAGCAAGAAGACCATGCCGATAAGGCATACGACATGTATGCAGAGACGGTGGGGCGGCGCGGCAACACGCGGCTTGCGGCGCTGAGCCCGGCCGCCGCGCACTCGCCGCGCCGCAGCTCCGAGGACTCGGCCGACGACACCTTCAGCGTGAAGGAGCTCAGGCATGAGTTGAAAGAGGTTGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAATGACAAGGCGGCGCTTGGATACCAGATTGAATTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTATGTACAGTTGCAGCGCGAGCACCGCGAGAAATGTTCGTCGTACGAGCGTCTAAAACGCGAGCACGAGTCTGTATCGCGGGAGCTAGTAGCGGCGCGCGACGCGGTGCGGGCTAGAgacgcggcggcggcggccgccggctTCGCGTTCGTGGACGCCGAGCTGGACAGCTCCGCCACGCCCGGCGCCGCCGCTGGCTCGGTGCCGGCCCTGGCACTCGTCTCGCACACCGCCGAGAAGCTGCTCAACGACGCTGGGGAGGGCACGCTCGATGTCCGGTTGCAGAAGCTACTTAGCTCAAAACAGGCGCTGGAATCAGAAGTGAGAAAGCTAAAGCTGCAGTTGAACGAGGAGCGCGCCGCCAGACAAAACGGCGTCGCAAACCACCACGATGACGAGTACGAGAATGAacTGGAGACGCTGCGCAAGTCTGTGGCGGAGGCGAAGGGTCGCGCGGCGCGTGCGGAGGCCGAGGTGGCGCTGCAGGGCGCGCTCGTGGTGCGCCTCGAGGCGCAGCTGGCCCGCCTGCGCGCCAGGCAGGACCACCAGGACGAGCATGAGGAGCAGCTGAAGCAGGAGCGACGCAAACTGCAGAGAGAGGCTCGAGAGGCACTCAACCGAGTGGAGGAACTGGAGACTGAGAACAGCCACCTGACGAAACGCCTCGACAAACTCAAGAACGCCAAATCCGCACTCCTAAAGGACCTGTGA
- Protein Sequence
- MGHRSEMATPDNSDEESGDAFTDGDFGDSDDETIVERRDETNPSHIPLNETVNEGVQKTNVTTNGHSLGLDSVEKQNEQPKLNGRKNSENQSSDVENLVISDLRRDSHSEQSPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGNTRLAALSPAAAHSPRRSSEDSADDTFSVKELRHELKEVEEKFRKAMILNAQLDNDKAALGYQIELLKDRIEELHEEYVQLQREHREKCSSYERLKREHESVSRELVAARDAVRARDAAAAAAGFAFVDAELDSSATPGAAAGSVPALALVSHTAEKLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDDEYENELETLRKSVAEAKGRAARAEAEVALQGALVVRLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- -
- 80% Identity
- -