Basic Information

Insect: Perizoma flavofasciatum
Gene Symbol: -
Assembly: GCA_958496245.1
Location: OY292421.1:5058492-5066417[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.7 1e+02 4.0 0.4 1 23 54 77 54 77 0.95

2 21 0.9 55 4.9 4.3 1 23 84 107 84 107 0.97

3 21 5.1 3.1e+02 2.5 3.9 1 23 181 203 181 203 0.97

4 21 0.002 0.12 13.2 1.0 2 23 209 230 208 230 0.97

5 21 2.5 1.5e+02 3.5 1.5 1 23 236 258 236 259 0.94

6 21 0.22 14 6.8 2.9 2 22 496 516 495 516 0.95

7 21 5.7 3.5e+02 2.4 0.4 1 20 612 631 612 634 0.70

8 21 0.4 24 6.0 0.4 2 23 769 790 768 790 0.96

9 21 0.23 14 6.7 1.1 3 23 867 887 865 887 0.96

10 21 0.036 2.2 9.3 0.5 1 23 895 917 895 917 0.97

11 21 0.21 13 6.9 5.6 1 23 956 978 956 978 0.95

12 21 0.00028 0.017 15.9 4.0 1 23 987 1009 987 1009 0.99

13 21 0.4 24 6.0 0.6 1 23 1090 1112 1090 1112 0.98

14 21 0.096 5.9 7.9 0.9 1 23 1168 1190 1168 1190 0.95

15 21 0.98 60 4.8 0.1 2 23 1197 1218 1196 1218 0.97

16 21 0.018 1.1 10.2 2.0 1 23 1286 1308 1286 1308 0.94

17 21 0.018 1.1 10.2 0.9 1 23 1314 1336 1314 1336 0.95

18 21 0.0077 0.47 11.4 2.6 1 23 1426 1448 1426 1448 0.97

19 21 0.00019 0.012 16.4 1.4 1 23 1454 1476 1454 1476 0.99

20 21 2.2 1.4e+02 3.6 1.8 3 23 1568 1588 1566 1588 0.93

21 21 0.0032 0.2 12.6 3.7 1 23 1599 1621 1599 1621 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.7	1e+02	4.0	0.4	1	23	54	77	54	77	0.95
2	21	0.9	55	4.9	4.3	1	23	84	107	84	107	0.97
3	21	5.1	3.1e+02	2.5	3.9	1	23	181	203	181	203	0.97
4	21	0.002	0.12	13.2	1.0	2	23	209	230	208	230	0.97
5	21	2.5	1.5e+02	3.5	1.5	1	23	236	258	236	259	0.94
6	21	0.22	14	6.8	2.9	2	22	496	516	495	516	0.95
7	21	5.7	3.5e+02	2.4	0.4	1	20	612	631	612	634	0.70
8	21	0.4	24	6.0	0.4	2	23	769	790	768	790	0.96
9	21	0.23	14	6.7	1.1	3	23	867	887	865	887	0.96
10	21	0.036	2.2	9.3	0.5	1	23	895	917	895	917	0.97
11	21	0.21	13	6.9	5.6	1	23	956	978	956	978	0.95
12	21	0.00028	0.017	15.9	4.0	1	23	987	1009	987	1009	0.99
13	21	0.4	24	6.0	0.6	1	23	1090	1112	1090	1112	0.98
14	21	0.096	5.9	7.9	0.9	1	23	1168	1190	1168	1190	0.95
15	21	0.98	60	4.8	0.1	2	23	1197	1218	1196	1218	0.97
16	21	0.018	1.1	10.2	2.0	1	23	1286	1308	1286	1308	0.94
17	21	0.018	1.1	10.2	0.9	1	23	1314	1336	1314	1336	0.95
18	21	0.0077	0.47	11.4	2.6	1	23	1426	1448	1426	1448	0.97
19	21	0.00019	0.012	16.4	1.4	1	23	1454	1476	1454	1476	0.99
20	21	2.2	1.4e+02	3.6	1.8	3	23	1568	1588	1566	1588	0.93
21	21	0.0032	0.2	12.6	3.7	1	23	1599	1621	1599	1621	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAAGTCGCCGAGGTCACAACTATTGCGCGCCCTTTCGAGGGTCGCTTTTCTGTGGAAGTCTCTTCGGAGGCCTCCTCGGACGCAGCGGAAGAGTACGAATTACCGCAGTGCAAGATAAGAAGGAACTATAACTGTGCGAAGTGCACTTATAATACGCAGAACCCGCGCGCTTATCTTGTTCACACGCGGGACGTTCATTTCGGAAGATTTAAGATTTATGAGTGTCAGCATTGCATCTATGCCTCGAGACATCAGCAGAAACTGTTGAGGCATACGAAGATGGTGCATGGAACGACGCCTTCATCTTCCACCGTAAGAGCGGAGGCCGAAAGTACCGCTCACGAGATTGCAGCGGATAGCATGGAGCGAATGGAAGATTTGCTTGAAGAGATTGAAGAATGCGACGACTCTCAGACGGACATGGATGTAGACGAGCCCGAGCGAGTAGACGACGCAGACGCGTACCTGGCTAGAAATGCTGAATTGCCAAAGGGAAAAGGAAAGTTTTTCTCGTGCGACAAATGTAACTACGTCACCCACATAAAGGCGAGATACACGAAGCACGTCAAGTACCACTCGATGCCGATGATCAAATGCACCATGTGCGATTTTCGCACGCCTTACAAGTGGAATCTGGATCGGCACATGAAGAACCACGGCGGAACCGGCAGTTTCGTGTGTTCCAAATGTACCTTCACGGCGGACATCAAGCAGAGCCTGACGGTGCACGAAATGAATCACCACACGCCGCCCGTGGGCCAATCGGCAGCGAGTCGGCGTCGCAACCGGGTGGGAGCCAGCGACCTGACGTCCGCGGAATCGACGAGCGCGCTCCCCAAGGAGGAGGAAGAGAGCGGCGACTCGCGCTCTTCACACTCGGTCTCGGACATTATGGGCCTACAAGACGCGGAGAGAGATATAGTGAGCTGCAACAGCGACTCCAATGATGGTGCTTCGTCACACGTCAGCCCAAACGGAGAAGATAACATATCCGTTCAAGACGCGTCCGGTCAACATTCCCCTATCTCAGGAAACGAAGACAAGATGcacagacaaaacaaaaaagcCCCTAGGCCTATTCCACAACTGATTCCTCTGAACTCATCAACACCTAATCAAAACAAATCGGCAGGCGAACCCCCAGCAAAGAAATTCAAAGAATCTATAAGCTCTGAGCTAGCGAGCAAGTTTGAAAACTTGCCCCGTGACATCACTTTGATACCGGTGAACAACACACCAAAAGAAACTATAGTCCGCAAGAAAAATGAGTCATTCTTCGACAAGTTGAAAGAAAGATTGCTGACTGAAACGGGCAAAGAGGGATCTCTGAAATGCAAAAGCTGCGGTTTCGAGAGCAAGTGCCTTTCAGAGCATTCTGTGCATGAAAAAAACTGCGCAGCTCAGGCTAGTCGCGTGGTGATGAACACTTCGCATTCCAGCATGGGCTCCACTCGATGCCAAAACTGCAGACACAGGTGCAAATCTAGCGCAGACTTGTACGTACACATGCTCACATGCGGCAAGAAAGAAAACACACAGAACGCAACAGAAACCAAATGCAACACTAGTGAAGCTTCTACGTCCAGTCACGATAAAGATGCCGAACCACACCCTATGGAAAACGTAGTTTTCGTATGGAATAACATAAATCAAGGTAACAAATTCGAAAGACCTCTGGATATCAACATCAATGATGACTCAACTATGCCGGAGTCACAAAGAAATTACGATACCGAAATCATCGACGATAACGAGGGAATGAATTTATCACCCAACAGTTTGAGTCTTGGGAAGAATGTTTACAAATGCCCTGATTGCAAGTTTTGGGCTGCTACCGCTTCTAGATTCCACGTCCACATTGTGGGACATTTGAACAAAAAGCCGTTTGAATGCTCACTTTGCAAGTACAAGTCTAACTGGCGCTGGGATATCACAAAGCATATTAAACTGAAGTCGGCTCGGGATCCAGAGCACAATGACGCCAAAGTGCTGATGACAGACGAGACCGGCAGACGAAACTACAGCAAATACAACAAGTTCTTAGCTGTTCCGGTGCTAAATGAAAACGGAGAAAATGAGTTTCACTACATCGATCAAAACACAACGGTCGATGCGTCGATGGAGTTGGATGAGACACTGAATGATACCGGCGAAATGACGAGCACGTCTTATGAAATGCAACCGCTTAACTTGCAGACCCAATTTGGCGATCCCAAATATAGCTCGATGGACAACGTTAACCAAGTTACGAAGCCGAAAAAGACTTTGTGGAAATGCAAAAAGTGCAATTACAAAGATCCGTCGAAGGATGCATTGCTGGAGCACGTGAGGCAGCACTCCAAGGGCGACAGCAGCGTGGATGACCCCAACGCCAAGAAGCCCGACGCCCCGGACCCGGCTGATCTCGCCTATCGCTGCGGGCATTGCAACCAACTGTCCAATTGGAAACACGTCATAcagAGACATTGCCGCTTGAAGCACGACGGAATTATAAAAGTGATCACCACAGTGAAGCCCAAACCCGACCCGGTCCCGCTATCGGCTCCCGAAACCTTCAACGACTTCTGCACCAAGTGTCCCTTCAAGACAAATGACAAGATAAAACTGATGGAACATCTACAACAGCATCAGCCGTCATCCCAGTCCATCTTCAAATGCTATTTCTGCCCGTACTTTGTCAAAGATGAACAAGATCTAATTCAACACCTTTTGCTACATGGCATAACAGATCCAGAAGATTATATCGCAAAAGCGATGGGCTGCAGATCTCCTTTGCCCGAGCATTCCGTATCCCATGAAACGACGGTCACCGCTAGTGGCTCCACTAAGCGCCACAAGTGCCACGAGTGCCCGTACGAAACAAACAGTAAATCCCAGTTCATGTATCACGAACAATTCCATCGTTCGACCTCCGCAGAAACCCCTTACAAATGCCCCGAGTGCAACTACAGCGTGTCAAAGAGACATTTGCTCCATCAACATTTGAGGGTTCACGGGATTTTCGCTAAGAAAAACGAAACTGAAGCAGAATTAGAAGCATCAACGTCTAACCAAAGAGCTGATAAATCTGATGGATTTAGCGAAGAAATACCTTTCGTATGGGTCTCGGCGAGAAACGAATTCCACAAAATGTACAAATGTCGCTATTGTTCGTACGTCAACTCTCAGAAATGTAAGATACCTAACCACGAAAAGATACATTGTCTCGGATTTGAAAATAGCGAAGTgataatatataaatgtttaGAGTGTAAATTTACAAGTGATAATGCCGGAAGACTGGCGGAACATTCCAAGAAGCATGGCCTTCTGTACGGCCGCATTTACAGCATGGTCGAGGAAGACACTCCCGATGAAGATCAAATATCTCGGCTTCGTCGAGTTGTCGAACTTGAAAAGAACGCTGTAAGCGAAGAATCTACAGCAGAAAATAGCGCAGTATTTGATTCGAAAGAAATTAAAATCCTGTTTTTCTGCCAGAAGTGTCCAGCCAGATATTTCACTGAAAGTGAACTTATAATGCATGAAAAATTTCACGATCTAAcaaatgcaaataaatgtaaGAACTGTGAATTCTCAGTCCCAGAAGAGACCGACCTAGTCGACCACCTGTCAGTGCATTCTGACGAGCACCATATTAGAACAAACATGCTTAAATTCATTCACAATTCACATTCTCTCCATAGAGAGCCTCGATTGGAAGCCAGTCGTAATTCTGACTGCTCAGACGTAAGTTGGTCGGTTGCAGTCAATTACAAAAGCAATGAAATAATGGAACCTCAACATAAGAAAACATCAGACACAAAACATACGCCCAAGCAATACTGCTGCAAAGAATGTCCAGCCAAATTCTTTAAAAGTTCAGCACTAACATATCACCTGGGGTTACACGGTGGCGAAGGGGAACATAAGTGCAAGAAATGTAGTTACGCCGTAAAAAATATAGGCAATTTGGCTAAGCACGAGATACTACATGAAACTGATAACAAATCAGCGAACTGTGAATATGAATCCGGCGatgatttagattttaaaaatgtCCCTCTCTCTGGAACAGACCTGTTTCAAAGAAAGACTGAAGCTCAAAAAAGAGTATTGACCGATAAAGACAAATTGGTCAGACCAAATGATCATTTTCCACCTGTGCTCCAGGCGGATCCTCAATTTGGATATCTGATGCATGGTAATCCCGAATTCATATATCCTACGTACCTGAAAAATGGACGGCAGAAGGAAAAACGATACAAATGTCATAAGTGCCCCTCAGCTTTCGAAAAGCGCgaacaatacaaaatacatttgtCACTTCACGGTTCCAAACAGAGGTACAAATGTGAATTATGCGACTACTCTGTAAAATATTACGCGAATTACGTTCAACACATGCGGAAGCACCAAATGAATGACGAGGCTCAGGCCGAAAGAATGAAAGGATGCAATGGTGACCCCGAAAGTCAGGAAGAAGTTAAACATGAAGAAAGCGCGGACAGCATCAAACTGGCAATCAAAACCATGCCGAAGGGAACACCTAAGACCGACTTTCAACAGTTCTCAATTAGAGATCAACAAACCCTTCGGCTTTTGCAACTTAGGAGATCTATGAATAATGGTGGCAAGGATGCAAGTACATCTGAAACATCGCCGGTAAAGGAGCGCAAAATGCACTTGTGTCTCCTTTGTCCTTACACTAATCAGCGGCAAGATGCTTTGAGTAACCACTACAGAAGACATGATGAAACTGATGTTCTCAATGCTGGCAGTCATAAATGCTCCTACTGTGACCTAGTAGTCGTGCAATCTCATTTCTTACGAGAACATTTAAAAACtcattttaatttcaacaaaattcTTACACCTGAATGTTTTGTGGCTAATGATGATGTTAGTTTTACTATATCAAAAGTAGATGACGAATGCGAACCAGTTGATCTCAAATTAGAAATGAAAAATACGATTTTAAGATCTTgcaatgatgaaaaaatattcgTTAAAATTAAGACAGGAGAACTTGTAGTTGACTAA
Protein Sequence: MLQQMSSSLSAQVAEVTTIARPFEGRFSVEVSSEASSDAAEEYELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECQHCIYASRHQQKLLRHTKMVHGTTPSSSTVRAEAESTAHEIAADSMERMEDLLEEIEECDDSQTDMDVDEPERVDDADAYLARNAELPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSAASRRRNRVGASDLTSAESTSALPKEEEESGDSRSSHSVSDIMGLQDAERDIVSCNSDSNDGASSHVSPNGEDNISVQDASGQHSPISGNEDKMHRQNKKAPRPIPQLIPLNSSTPNQNKSAGEPPAKKFKESISSELASKFENLPRDITLIPVNNTPKETIVRKKNESFFDKLKERLLTETGKEGSLKCKSCGFESKCLSEHSVHEKNCAAQASRVVMNTSHSSMGSTRCQNCRHRCKSSADLYVHMLTCGKKENTQNATETKCNTSEASTSSHDKDAEPHPMENVVFVWNNINQGNKFERPLDININDDSTMPESQRNYDTEIIDDNEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDQNTTVDASMELDETLNDTGEMTSTSYEMQPLNLQTQFGDPKYSSMDNVNQVTKPKKTLWKCKKCNYKDPSKDALLEHVRQHSKGDSSVDDPNAKKPDAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPVPLSAPETFNDFCTKCPFKTNDKIKLMEHLQQHQPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPEHSVSHETTVTASGSTKRHKCHECPYETNSKSQFMYHEQFHRSTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFAKKNETEAELEASTSNQRADKSDGFSEEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKFTSDNAGRLAEHSKKHGLLYGRIYSMVEEDTPDEDQISRLRRVVELEKNAVSEESTAENSAVFDSKEIKILFFCQKCPARYFTESELIMHEKFHDLTNANKCKNCEFSVPEETDLVDHLSVHSDEHHIRTNMLKFIHNSHSLHREPRLEASRNSDCSDVSWSVAVNYKSNEIMEPQHKKTSDTKHTPKQYCCKECPAKFFKSSALTYHLGLHGGEGEHKCKKCSYAVKNIGNLAKHEILHETDNKSANCEYESGDDLDFKNVPLSGTDLFQRKTEAQKRVLTDKDKLVRPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERMKGCNGDPESQEEVKHEESADSIKLAIKTMPKGTPKTDFQQFSIRDQQTLRLLQLRRSMNNGGKDASTSETSPVKERKMHLCLLCPYTNQRQDALSNHYRRHDETDVLNAGSHKCSYCDLVVVQSHFLREHLKTHFNFNKILTPECFVANDDVSFTISKVDDECEPVDLKLEMKNTILRSCNDEKIFVKIKTGELVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_01171070; iTF_00663642;
80% Identity: -