Basic Information

Insect: Perizoma affinitatum
Gene Symbol: -
Assembly: GCA_961405105.1
Location: OY560191.1:5006713-5014528[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.7 1.1e+02 4.0 0.4 1 23 54 77 54 77 0.95

2 21 0.91 59 4.9 4.3 1 23 84 107 84 107 0.97

3 21 5.2 3.3e+02 2.5 3.9 1 23 178 200 178 200 0.97

4 21 0.002 0.13 13.2 1.0 2 23 206 227 205 227 0.97

5 21 2.5 1.6e+02 3.5 1.5 1 23 233 255 233 256 0.94

6 21 0.09 5.8 8.0 3.7 2 22 493 513 492 513 0.96

7 21 5.7 3.7e+02 2.4 0.4 1 20 609 628 609 631 0.70

8 21 0.4 26 6.0 0.4 2 23 766 787 765 787 0.96

9 21 0.23 15 6.7 1.1 3 23 864 884 862 884 0.96

10 21 0.036 2.3 9.3 0.5 1 23 892 914 892 914 0.97

11 21 0.15 9.5 7.4 3.5 1 23 953 975 953 975 0.95

12 21 0.00028 0.018 15.9 4.0 1 23 984 1006 984 1006 0.99

13 21 0.4 26 6.0 0.6 1 23 1087 1109 1087 1109 0.98

14 21 0.059 3.9 8.6 0.5 1 23 1165 1187 1165 1187 0.95

15 21 0.36 23 6.1 0.2 2 23 1194 1215 1193 1215 0.97

16 21 0.018 1.2 10.2 2.0 1 23 1283 1305 1283 1305 0.94

17 21 0.017 1.1 10.3 0.9 1 23 1311 1333 1311 1333 0.95

18 21 0.0078 0.51 11.4 2.6 1 23 1423 1445 1423 1445 0.97

19 21 0.0002 0.013 16.4 1.4 1 23 1451 1473 1451 1473 0.99

20 21 0.92 59 4.9 2.0 1 23 1563 1585 1563 1585 0.96

21 21 0.0033 0.21 12.6 3.7 1 23 1596 1618 1596 1618 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.7	1.1e+02	4.0	0.4	1	23	54	77	54	77	0.95
2	21	0.91	59	4.9	4.3	1	23	84	107	84	107	0.97
3	21	5.2	3.3e+02	2.5	3.9	1	23	178	200	178	200	0.97
4	21	0.002	0.13	13.2	1.0	2	23	206	227	205	227	0.97
5	21	2.5	1.6e+02	3.5	1.5	1	23	233	255	233	256	0.94
6	21	0.09	5.8	8.0	3.7	2	22	493	513	492	513	0.96
7	21	5.7	3.7e+02	2.4	0.4	1	20	609	628	609	631	0.70
8	21	0.4	26	6.0	0.4	2	23	766	787	765	787	0.96
9	21	0.23	15	6.7	1.1	3	23	864	884	862	884	0.96
10	21	0.036	2.3	9.3	0.5	1	23	892	914	892	914	0.97
11	21	0.15	9.5	7.4	3.5	1	23	953	975	953	975	0.95
12	21	0.00028	0.018	15.9	4.0	1	23	984	1006	984	1006	0.99
13	21	0.4	26	6.0	0.6	1	23	1087	1109	1087	1109	0.98
14	21	0.059	3.9	8.6	0.5	1	23	1165	1187	1165	1187	0.95
15	21	0.36	23	6.1	0.2	2	23	1194	1215	1193	1215	0.97
16	21	0.018	1.2	10.2	2.0	1	23	1283	1305	1283	1305	0.94
17	21	0.017	1.1	10.3	0.9	1	23	1311	1333	1311	1333	0.95
18	21	0.0078	0.51	11.4	2.6	1	23	1423	1445	1423	1445	0.97
19	21	0.0002	0.013	16.4	1.4	1	23	1451	1473	1451	1473	0.99
20	21	0.92	59	4.9	2.0	1	23	1563	1585	1563	1585	0.96
21	21	0.0033	0.21	12.6	3.7	1	23	1596	1618	1596	1618	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAAGTCGCCGAGGTCACAACTATTGCGCGCTCGTTCGAGGGTCGCTTTTCTGTGGAAGTCTCTTCGGAGGCCTCCTCGGACGCGGCGGAAGAGTACGAACTACCGCAGTGCAAGATAAGAAGGAACTATAACTGTGCGAAGTGCACTTATAATACGCAGAACCCGCGCGCTTATCTTGTTCACACGCGGGACGTTCATTTCGGAAGATTTAAGATTTATGAGTGTCAGCATTGCATCTATGCCTCGAGACATCAGCAGAAACTGTTGAGGCATACGAAGATGGTGCATGGAACGACGCCTTCGTCTTCCACATTGAGAACGGAGGCCGAAAGTACCGCTCACGAAATTGCAGCGGATAGCATGGAAGATTTGCTTGAAGAGATTGAAGAATGCGAAGACTCTCAGACGGACATGGATGTAGACGAGCCCGAGCGAGTAGACGACGCAGACGCGTACCCGGCTAGAAATGCCGAATTGCCAAAGGGAAGAGGAAAGTTTTTCTCGTGCGACAAATGTAACTACGTCACCCACATAAAGGCGAGATACACGAAGCACGTCAAGTACCATTCGATGCCGATGATCAAATGCACCATGTGCGATTTTCGCACGCCTTACAAGTGGAATCTGGATCGGCACATGAAGAACCACGGCGGAACCGGCAGTTTCGTGTGTTCCAAATGCACCTTCACGGCGGATATCAAGCAGAGTCTGACGGTGCACGAAATGAATCACCACACGCCGCCCGTGGGCCAATCGGCGGCGAGTCGGCGTCGCAACCGGGTGGGAGCCAGCGACCTGACGTCCGCGGAATCGACGAGTGCGCTCCCCAAGGAGGAGGAAGAGAGCGGTGACTCGCGCTCTTCACACTCGGTCTCGGACATTATGGCCTTACAAGACGCGGAGAGAGATATAGTGAGCTGCAACAGCGACTCTAATGATGGTGCTTCGTCACAAGTCAGCCCAAACGGAGAAGATAACCTATCCGTTCAAGGCGTGTCCGGCCAACATTCCCCTATCTCAGGAAACGAAGACAAGAtgcacaaacaaaacaaaaaagccCCCAGGCCCATTCCACAACTGATTCCTCTGAACGCATCAACACCTAATCAAAACAAATCGCCAGGCGAACCCCCAGCAAAGAAATTCAAAGAATCTGCAAGCTCTGAGCTAGCGAGCAAGTTTGAAAACTTGCCTCGTGGCATCACTTTGATACCGGTAAACAACACACCAAAAGAAACTATAGTCCGCAAGAAAAATGAGTCATTCTTCGACAAGTTGAAAGAAAGATTGCTGACTGAAACGGGCAAAGAGGGATCTCTGAAATGCAAAAGCTGCGGTTTCGAGAGCAAATGCCTTTCGGAGCATTCCGTGCACGAAAAAAACTGCGCAGCTCAGGCTAGTCGCGTGATGATGAACACTTCGCATTCCAGCATGGGCTCCACTCGATGCCAAAACTGCAGACACAGGTGCAAATCTAGCGCAGACTTGTACGTACACATGCGCACATGCGGCAAAAAAGAAAACACACAGAACGCCACACAAACCAAATGCAATACTAGTGAAGCTTCTACGTCCAGTCACGATAAAGATGCCGAACCACATCCTATGGAAAATGTCGTTTTCGTATGGAATAACATAAACCAAGGTAACAAATTCGAGAAACCTCTTGATATCAACATCAACGATGACTCAACTATGCCAGAGTCACAAAGAAATTACGATACCGAAAATATCGACGATAACGAGGGAATGAATTTATCACCTAACAGTTTGAGCCTTGGGAAGAATGTTTACAAATGCCCTGATTGCAAGTTCTGGGCTGCTACCGCTTCTAGATTCCACGTCCACATTGTGGGGCATTTAAACAAAAAGCCGTTTGAATGCTCACTTTGCAAATACAAGTCTAACTGGCGTTGGGATATTACAAAGCATATTAAACTGAAGTCGGCTCGGGATCCAGAGCACAATGACGCCAAAGTGCTGATGACAGACGAGACCGGTAGACGAAACTACAGCAAATACAACAAGTTCTTAGCTGTTCCGGTGCTAAATGAAAATGGTGAAAATGAGTTTCACTACATCGATCAAAACACAACGGTCGATGCGTCCATGGAGTTGGATGACACACTGAATGATACCGCCGAAATGACGAGCACGTCTTATGAAATGCAACCACTCAACTTGCAGACCCAATTTGGCGATCTTAAGTGTAGCCCGACGGACAACGTTAACCAAGTTACGAAACCCAAAAAGACTATGTGGAAATGTAAAAAGTGCAATTACAAAGATCCGTCGAAGGATGCATTGCTGGAGCACGTGAGGCAGCACTCCAAGGGCGACAGCAGCGTGGATGACCCCAACGCCAAGAAGCCTGACGCCCCGGACCCGGCTGATCTCGCCTATCGCTGCGGGCATTGCAACCAACTGTCCAATTGGAAACACGTCatacagAGACATTGCCGCTTGAAGCACGACGGAATTATAAAAGTGATTACCACAGTGAAGCCCAAACCCGACCCGGTCCCGCTATTGGCTCCCGAAACCTACAACGACTTCTGCACCAAGTGTCCCTTCAAGACTAATGACAAGATAAAACTGATGGAACATCTACAACAGCATCAGCCGTCATCCCAGTCCATCTTCAAATGCTACTTCTGCCCGTACTTTGTCAAAGATGAACAAGATCTAATTCAACACCTTTTGCTACATGGCATAACAGATCCCGAAGATTATATCGCAAAAGCGATGGGCTGCAGATCGCCTTTGCCCGAGCATTCCGTCAGCCATGAAACGACGGCCACCGCTAGTGGCTCCAATAAGCGCCACAAGTGCCAAGAGTGCCCGTACGAAACAAACAGTAAATCCCAGTTCATGTATCACGAACAATTTCATCGCTCGACCTCCGCAGAAACCCCTTACAAATGCCCCGAGTGCAACTACAGCGTGTCAAAAAGACATCTGCTCCATCAACATTTGAGGGTTCACGGGATTTTCGCTAAGAAAAACGAAACCGAAGCAGAATTAGAAGCATCAACGTCTAACCAAAGAGCTGATAAATCTGATGGATTTAGTGAAGAAATACCTTTCGTATGGGTCTCAGCGAGAAACGAATTCcacaaaatgtataaatgtcGCTATTGTTCGTACGTCAACTCTCAGAAATGTAAGATACCTAACCACGAAAAGATACATTGTCTCGGATTTGAAAATAGCGAAGtgataatatataaatgtttagaGTGTAAATTTACAAGTGATAATGCCGGAAGACTGGCGGAACATTCCAAGAAGCATGGCCTTCTGTACGGCCGCATTTACAGCTTGGTCGAGGAAGACACTCCCGATGAAGATCAAATATCTCGGCTTCGTCGAGTTGTCGAACTTGAAAAGAACGCTGTAAGCGAAGAATCTTCAGCAGAAAATAGCTCAGTGTTTGATTCGAAAGAAATTAAAATCCTGTATTTCTGCCAGAAGTGTCCAGCCAGGTATTTCAATGAAAGTGAACTTATAATACATGAACAATTTCACGATCTAacaaatgcaaataaatgtaaGAACTGTGAATTCTCAGTCCCAAAAGAGACCGACCTAGTCGACCACCTGTCAGTGCATTCTGACGAGCACCATATTAGAACAAACATGCTTAAATTCATTCACAATTCACATTCTCTTCATAGAGAGCCTCGATTGGAAGCCAGTCGTAATTCTGACTGTTCAGACGTAAGTTGGTCGGTTGCAGTCAATTACAAAAGCAACGAAATAATGGAACCTCAACATAAGAAAACATCAGACTCAAAACATACGCCCAAGCAATACTGCTGCAAAGAATGTCCAGCCAAATTCTTTAAAAGTTCAGCACTAACATACCACCTGGGTCTACACGGTGGCGAAGGGGAACATAAGTGTAAGAAATGTAGTTACGCCGTAAAAAATGTAGGCAATTTGGCGAAGCACGAGATACTACACGAAACTGATAACAAGTCAGCGAACTGTGATTATGAATCCGGAGAAgatttagattttaaaaatgtgcCTCTCTCTGGAACAGACTTGTTTCAAAGAAAGACTGAAGCTCAGAAAAGAGTATTGACAGATAAAGACAAATTGGTTAGACCAAATGATCATTTTCCACCTGTGCTCCAGGCGGATCCTCAATTTGGATATCTGATGCATGGTAACCCAGAATTCATATATCCTACTTACCTGAAAAATGGACGTCAGAAGGAAAAACGATACAAATGCCATAAGTGCCCCTCAGCTTTCGAAAAGCGCgaacaatacaaaatacatttgtcGCTTCACGGTTCCAAACAGAGGTACAAATGTGAATTATGCGATTACTCCGTAAAATATTACGCGAATTACGTTCAACACATGCGGAAGCACCAAATGAATGATGAAGCTCAGGCCGAAAGGACGAAAGGATGCAATGGTGACCCCGAAAGTCAGGAAGAAGTTAAACAAGAAGAAAGCGCGGACAGCATCAAAATGGCAATGAAAACTATGCCCAAGGGAACACCGAAGACTGACTTTCAACAGTTCTCAATTAGAGATCAACAAACCCTTCGGCTTTTGCAACTTAGGAGATCTATGAACAATAGTGGAATGGATGCAAGTACATCCGAAACATCGCCGGTAAAGGAGCGCAAAATGCACATGTGTCTCCTTTGTCCTTACACAAATCAGCGGCAAGATGCTTTGAGCAACCACTACAGAAGACACGATGAAACTGATGTTATCAATGCTGGCAGTCATAAATGCTCCTACTGTGACCTAGTAGTTGTGCAATCTCATTTCTTACGAGAACATTTAAAAactcattttaatttcaacaaaattcTTACGCCTGAATGTTTTGTGGCTAATGATGATGTTAGTTTTACTGTATCAAATGTAGATGACGAATGCGAACCAGTTGATCTCAAATTAGAAATGAAAAATACGATTTTAAGCTCTTGCAATGATGAAAAATTATTCGTTAAAATTAAGACAGGAGAACTTGTTGTTGACTAA
Protein Sequence: MLQQMSSSLSAQVAEVTTIARSFEGRFSVEVSSEASSDAAEEYELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECQHCIYASRHQQKLLRHTKMVHGTTPSSSTLRTEAESTAHEIAADSMEDLLEEIEECEDSQTDMDVDEPERVDDADAYPARNAELPKGRGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSAASRRRNRVGASDLTSAESTSALPKEEEESGDSRSSHSVSDIMALQDAERDIVSCNSDSNDGASSQVSPNGEDNLSVQGVSGQHSPISGNEDKMHKQNKKAPRPIPQLIPLNASTPNQNKSPGEPPAKKFKESASSELASKFENLPRGITLIPVNNTPKETIVRKKNESFFDKLKERLLTETGKEGSLKCKSCGFESKCLSEHSVHEKNCAAQASRVMMNTSHSSMGSTRCQNCRHRCKSSADLYVHMRTCGKKENTQNATQTKCNTSEASTSSHDKDAEPHPMENVVFVWNNINQGNKFEKPLDININDDSTMPESQRNYDTENIDDNEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDQNTTVDASMELDDTLNDTAEMTSTSYEMQPLNLQTQFGDLKCSPTDNVNQVTKPKKTMWKCKKCNYKDPSKDALLEHVRQHSKGDSSVDDPNAKKPDAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPVPLLAPETYNDFCTKCPFKTNDKIKLMEHLQQHQPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPEHSVSHETTATASGSNKRHKCQECPYETNSKSQFMYHEQFHRSTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFAKKNETEAELEASTSNQRADKSDGFSEEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKFTSDNAGRLAEHSKKHGLLYGRIYSLVEEDTPDEDQISRLRRVVELEKNAVSEESSAENSSVFDSKEIKILYFCQKCPARYFNESELIIHEQFHDLTNANKCKNCEFSVPKETDLVDHLSVHSDEHHIRTNMLKFIHNSHSLHREPRLEASRNSDCSDVSWSVAVNYKSNEIMEPQHKKTSDSKHTPKQYCCKECPAKFFKSSALTYHLGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHETDNKSANCDYESGEDLDFKNVPLSGTDLFQRKTEAQKRVLTDKDKLVRPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERTKGCNGDPESQEEVKQEESADSIKMAMKTMPKGTPKTDFQQFSIRDQQTLRLLQLRRSMNNSGMDASTSETSPVKERKMHMCLLCPYTNQRQDALSNHYRRHDETDVINAGSHKCSYCDLVVVQSHFLREHLKTHFNFNKILTPECFVANDDVSFTVSNVDDECEPVDLKLEMKNTILSSCNDEKLFVKIKTGELVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_01171940;
80% Identity: -