Pmec013380.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Perdita meconis
Gene Symbol
dmrta2
Assembly
GCA_030770465.2
Location
JASKOS020000005.1:12570487-12573643[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.2e-28 7.4e-24 84.5 10.8 1 47 44 90 44 90 0.99

Sequence Information

Coding Sequence
ATGTCGTTGCCGCGGGGTGTCGGCCTCGGCGTCGACGTCGGCCAGCTGATGCAACAccagcagcaacaacagcaacaTCACGTGCTACCAGCCGCGTTCTTTCTTCGTGCCAGTGCCGAGAGATACCAAAGGACACCGAAGTGCGCGAGATGCCGCAATCACGGCGTCGTTTCGGCGTTGAAAGGCCACAAGCGTTACTGTCGATGGAGAGACTGCGTGTGTGCGAAATGTACGCTAATCGCCGAGAGGCAACGGGTCATGGCTGCTCAGGTCGCGTTACGGAGGCAGCAGGCCCAGGAGGAGAGCGAGGCGCGCGAGTTAGGGTTGCAATTGCAGTACAATACAGGCAGCTGCACCACCGCCCCCGTTCTCCCCGGTGCAGCGAGTGCAACCACGCCAGCTGGTAGTCCGCCCCCGCACCCGGCCCATGTAGCGAGTCCAGCCGGATTGGCGATCCCGGCGGCGGCGGCAGCCGCAGCCGCGGCCGCGGCCGCACACATTCAAACCCAACTGCAACACCAGCAACCTGATTGCGGCCTCCTGCAGCGAAAAAGGCTCCCGCAGGACGAATACAGGCAGCCGAAGGTCGAGAAACAGGAGCCCATTGTTGGAGGAGTCACAGATTGCGGGAGAGTTGAAATCCGATGGTTTCTGGGCATTTGGGAGCCTTTTGGGACTCTGAGTCGTGGAAGTATATTGAGGTTGGGAAAACTGCTGATTGGGGTAGATTGGGGTGAATTGGACGTGGTTTGA
Protein Sequence
MSLPRGVGLGVDVGQLMQHQQQQQQHHVLPAAFFLRASAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLQLQYNTGSCTTAPVLPGAASATTPAGSPPPHPAHVASPAGLAIPAAAAAAAAAAAAHIQTQLQHQQPDCGLLQRKRLPQDEYRQPKVEKQEPIVGGVTDCGRVEIRWFLGIWEPFGTLSRGSILRLGKLLIGVDWGELDVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00215041; iTF_00217092; iTF_00217766; iTF_00219815; iTF_00225255; iTF_00231336; iTF_00223212; iTF_00222543; iTF_00225936; iTF_00228690; iTF_00227989; iTF_00226615; iTF_00220600; iTF_00223896; iTF_00219132; iTF_00227293; iTF_00229373; iTF_00216415; iTF_00230047; iTF_00221280; iTF_00233248; iTF_00860417; iTF_00303050; iTF_00863978; iTF_00866030; iTF_00088845; iTF_00140609; iTF_00684805; iTF_00982311; iTF_00218444; iTF_00360236; iTF_00982988; iTF_00215726; iTF_00088021; iTF_00141846; iTF_00086302; iTF_01417727; iTF_00084576; iTF_00118033; iTF_00962532; iTF_00306286; iTF_00391313; iTF_01070386; iTF_01066963; iTF_00864660; iTF_00085398; iTF_01065592; iTF_00863292; iTF_00762574; iTF_00183965; iTF_00183304; iTF_01498240; iTF_00087182;
90% Identity
iTF_00140609; iTF_00217092; iTF_00962532; iTF_00684805; iTF_00217766; iTF_00219815; iTF_00225255; iTF_00982311; iTF_00231336; iTF_00218444; iTF_00223212; iTF_00982988; iTF_00215726; iTF_00222543; iTF_00225936; iTF_00228690; iTF_00088021; iTF_00227989; iTF_00141846; iTF_00226615; iTF_00220600; iTF_00223896; iTF_00219132; iTF_00227293; iTF_00229373; iTF_00086302; iTF_00216415; iTF_00230047; iTF_01417727; iTF_00221280; iTF_00233248; iTF_01407331; iTF_01229047; iTF_00215041; iTF_00863978; iTF_00360236; iTF_00360925; iTF_00306286; iTF_00762574; iTF_00864660; iTF_00863292; iTF_00391313; iTF_00861170; iTF_00183304; iTF_00303050; iTF_01070386; iTF_00183965; iTF_00865343; iTF_01066963; iTF_01065592; iTF_01069689; iTF_01066277; iTF_00862586; iTF_00084576; iTF_00088845; iTF_00085398; iTF_01498240; iTF_00633648;
80% Identity
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