Alab029640.1
Basic Information
- Insect
- Apis laboriosa
- Gene Symbol
- dmrta2
- Assembly
- GCA_014066325.1
- Location
- JACEOM010000037.1:2238337-2240595[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-28 5e-24 84.9 10.8 1 47 44 90 44 90 0.99 2 2 2.5 2.3e+04 -3.6 0.0 33 40 177 184 176 186 0.63
Sequence Information
- Coding Sequence
- ATGTCGTTGCCGCGGGGTGTCGGTCTTGGTGTCGACGTAGGTCAATTAATGCAACAtcagcaacaacagcagcaacatCACGTGTTACCAGCCGCGTTTTTTCTTCGTGCTAGTGCTGAGAGATATCAAAGGACACCGAAGTGTGCAAGATGCCGTAATCACGGTGTTGTTTCCGCGTTAAAGGGTCACAAACGATACTGTCGTTGGCGGGATTGCGTATGTGCGAAATGTACATTAATTGCGGAGAGACAACGGGTCATGGCTGCTCAGGTCGCGTTAAGAAGGCAACAAGCCCAGGAGGAAAGTGAAGCCCGCGAATTGGGCCTGCAACTGCAATATAATGCTGGCAGCTGCACTACTGCTCCCGTGTTGCCTGGCGCAGCGAGTGCTACTACGCCAGCTGGCAGTCCGCCCCCGCACCCGGCCCATGTAGCAAGTCCTGCCGGTTTAGCAATTCCAGCGGCTGCAGCAGCCGCGGCCGCGGCTGCCGCCGCGCACATTCAAACGCAACTTCAGCATCAGCAACCTGATTGCAGTCTTTTGCAGCGGAAGAGACTTCCTCAGGATGAATATCGGCAGCCCAAGATCGAGAAACAAGAATCAATCGTCGGTGGAATTGCCGGTAAGTAA
- Protein Sequence
- MSLPRGVGLGVDVGQLMQHQQQQQQHHVLPAAFFLRASAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLQLQYNAGSCTTAPVLPGAASATTPAGSPPPHPAHVASPAGLAIPAAAAAAAAAAAAHIQTQLQHQQPDCSLLQRKRLPQDEYRQPKIEKQESIVGGIAGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169194;
- 90% Identity
- iTF_01169194;
- 80% Identity
- iTF_00140609;