Pfun005296.1
Basic Information
- Insect
- Penthetria funebris
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_027564355.1
- Location
- JANSTX010055151.1:4829-10408[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-72 4e-68 229.8 21.1 92 299 2 196 1 197 0.95 2 2 0.017 1.4e+02 1.4 3.6 213 246 219 251 199 271 0.58
Sequence Information
- Coding Sequence
- CTTTTAAAGGATGTTGAAGAACGTTTTCGAAAAGCTATGATAGCAAATGCGCAATTAGATAATGAACGTGCATCTCAATCATATCAAATTCAACATCTTAAGGATAAGTTAGAAGAAATGGAAGAAAACCATGCACAATTACAACGTGAACATAAGGACAAATGTCGTGACCATGATGCCTTGAAACGAAATAATGATAAATTAACGGAAGAATTAAAATTAGTACAGGGTCAATTAAATGAAAGGGATATATTAATTGCCGAACAAGGTTTAACAATAGTTATTGTTGAAAATGCAGATGGTACAGATGCAAGAAGGGCTCTAGTCAGTAATGATAATGCACAATTATTAGATTCGGTTCAAGGATCATTAGATGTTCGGCTCAAGAAATTTACAGATGAGAAACAATCATTAAAAAGTGAATTACAACAATTACATCAACAAATTATTGATTTAAGAACACAACGTAGATCTGGTTCTCAAAATGGTCCACTTGGTGAAGATGATTTTGAGGATGCACAAAGAGAAGCCAACAAACTCATCGCTGATTATAAATTTAAATTACAAAAAGCTGATCAGGAAATAGCTAGTCTTCAAGCCAGTTTAGCACGTTCAGAAACTCAAGTTATACGATATAAAAGTACAGCAGATGCTTCAGAAAAATCTGAATCTGAATTGAAAATTGAACGTAGAAAATTGCAAAGAGAGaatcgtgaaattatggaaagattagaagagctggaaacttcaaataatcatcttttaaaacgtttagataaacttaaaaatgccaaaagtgcattattaaaagatctctga
- Protein Sequence
- LLKDVEERFRKAMIANAQLDNERASQSYQIQHLKDKLEEMEENHAQLQREHKDKCRDHDALKRNNDKLTEELKLVQGQLNERDILIAEQGLTIVIVENADGTDARRALVSNDNAQLLDSVQGSLDVRLKKFTDEKQSLKSELQQLHQQIIDLRTQRRSGSQNGPLGEDDFEDAQREANKLIADYKFKLQKADQEIASLQASLARSETQVIRYKSTADASEKSESELKIERRKLQRENREIMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285438;
- 90% Identity
- -
- 80% Identity
- -