Prec010757.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pasiphila rectangulata
Gene Symbol
clz9
Assembly
GCA_963082625.1
Location
OY720241.1:13185036-13187975[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-11 2.2e-08 34.8 0.0 2 41 16 56 15 60 0.92

Sequence Information

Coding Sequence
ATGCCCAGAAATTATGTGCGGAAAACGAATATTGCGTCATACCCACGTGAAAAATTATTAGAGGCTGTTAGAGCAGTGAAAAGTGGGAAACTGTCGGGGTATGAGGCCTCTAAGCATTATGGAATACCCAGACCTACCATAATAAATCGAGTATATGATCGTAAAGGCCTCAAATCAAATACTTTGGGACGAGCCACTATCTTATCTCGGAAAGTAGAAGAAGATCTTGTAAAAAACCTGCGTGACATGGAGAAGCATGGATTTGGACTGACAAGGAAAGAAATATTAGAGACAGTGGGCCAGTATGTGTCGGAAAATGACATCAAAAATCCGTTTAAAAATGGCGTGCCCGGGGAAGATTGGTttctttcatttaaaaaaaggcataATCTATCAATTAAGAAGCCACAGCCGGTAGAATATGCTAGAAAACAGGCATGTAGCCCATATATTATATATCCCTACTTTGATTTACTACAACAAACACTCACAGAACTCAAATTACTAGACAGACCATCTCATATTTGGAATGTTGACGAAACCAGCTTTTCAAAAGATCCTTCTAAGTCAAAAGTAGTTGGAATTAAAGGATTTACTTCGACGAGAACAATCGCTTCTCCTGGAAAGGACAATACCACCGTCCTATTAGGCTGTAACGCTATTGGAGAAAAAACTCCACCGGTAATCGTATTCAAGGGGAAAAATGTGTGGGACGAATGGACAACAGACGACGGGTATCCTGGGACAGCATATGCTGCAACCAGTAATGGCTGGATGGAGACAGCGGTTTTCGAAAACTTTTTCGAAaaagtgtttttaaaaacagtAGGACCAAAACGACCCATCCTTTTGATATATGACGGACACGCAACACATGTTGGTATAAACCTCATTAAAAAAGCTAGAAAAgctaatattacaattttaaaaatacctcCACACACCAGCCATCTTTTACAGCCACTAGATTTAGcggtaaataaatctttaaaagATAAATGGGACGTTGCCCTTGTAAAGTGGCAGAGGTTGAATATCGGAATGTCGTTGCCAAAAAAAGATTTTGCGAAAATGCTTGGACAAATTTGGGGTGGATTGGACCCGGCTATATGTGCAGCTGGTTTTCTAAAAGCGGGAATATATCCCCTTAATAAAAATGCTATCTCAGAAGATAAGTTCAACCAAGTTCTTCTAGAAGAATGGAAACATAAAGCAACATGTGATGCTACGAATATTATCGAAGACCCTACTAATGAACCCCTGAATGATGTGCCGCTGTGTACTGAGCCACCTAAATACAACCCGGACTCGTTGCTAGCTCTCTCTTTAAAAAGCATCGACTTGACTCGAAATATTCGTCATCCTACATTTTCGGATTTCCCACAAAATTCGACAAAAGAATATAGCAGTGATCGTAACTCTTTCAACCAGCTCAGTTATGAATCAACTAGCTCAGTGAACATCAGGAAGCCCACAGTTCAAATTCTAGAAAACAGGATTATCAGCTTCGAAGATCTACTATTATTGAGAATAAAAGCAGGTACCAGctacaaaactaaaagaaagCGTATGGCAACTGGAGCTGAAGTAATAACCCGTGACGATGTATTAATAAATTTGGAGAAAACAGAGCAGGAAAAAAAAAGTCAGACAAAGCTacaagaaaaagcaaaagcagagcaaaaaattaaaaaccacgTACAGGAAACTAAACACGACGCAAAACGAAGAAAAGAAACTATACCAgaacaaaatcaacaaaaaggACAAAACTCAAAAGCAATAGCAGagaaaaacattgaaaaagaCATACGTGAAATTAAAGAGAACCCACAAAATAATGAACAGAAAAATATTACAGAACAAAATCAACAAAGAGgacaaaactcaaaaacgataggAGAAGTAAACATTCAAAAAGACATACGTGGAATTAAAGGGAAGccaaaaataaatgaacaaaaaGGACAAAACCcaaaaacagtgaaaaaaagaaaagcgataaacaataatagaaaaaaactaaaatattcgtCTTCAAGTGACACTGACACTGAAATTAAGTACGACGAAGATAGCGACGATTATGATTTTTGGGAAAATATACTGCATGGTAGTGATGAAGACAAAGCAGAAGATATAGAACTCGACGATGACAAGGAAAACGATGTTAATGCAGTGGGTAAAAATGATTGGGTGCTGGTTAAATTTTGCACTAAAAAGTCACTCAAACATTACGTAGGAgtagttattaatataaatgatGACGGTTCTCCTGTAATTAAATATACAAGAAGGAAATCAAAAGCAGAAACAGCAACTATTTTTGCTTTCCCTGTGGTGGACGACATCTCGGAACTTAAACACAGGGAGGACATTGTCACGAAATTGCCCACACCTGCAATTGGTCGAAGAGGCCaagttacttttaaaatatcttttaatatTCAGTAG
Protein Sequence
MPRNYVRKTNIASYPREKLLEAVRAVKSGKLSGYEASKHYGIPRPTIINRVYDRKGLKSNTLGRATILSRKVEEDLVKNLRDMEKHGFGLTRKEILETVGQYVSENDIKNPFKNGVPGEDWFLSFKKRHNLSIKKPQPVEYARKQACSPYIIYPYFDLLQQTLTELKLLDRPSHIWNVDETSFSKDPSKSKVVGIKGFTSTRTIASPGKDNTTVLLGCNAIGEKTPPVIVFKGKNVWDEWTTDDGYPGTAYAATSNGWMETAVFENFFEKVFLKTVGPKRPILLIYDGHATHVGINLIKKARKANITILKIPPHTSHLLQPLDLAVNKSLKDKWDVALVKWQRLNIGMSLPKKDFAKMLGQIWGGLDPAICAAGFLKAGIYPLNKNAISEDKFNQVLLEEWKHKATCDATNIIEDPTNEPLNDVPLCTEPPKYNPDSLLALSLKSIDLTRNIRHPTFSDFPQNSTKEYSSDRNSFNQLSYESTSSVNIRKPTVQILENRIISFEDLLLLRIKAGTSYKTKRKRMATGAEVITRDDVLINLEKTEQEKKSQTKLQEKAKAEQKIKNHVQETKHDAKRRKETIPEQNQQKGQNSKAIAEKNIEKDIREIKENPQNNEQKNITEQNQQRGQNSKTIGEVNIQKDIRGIKGKPKINEQKGQNPKTVKKRKAINNNRKKLKYSSSSDTDTEIKYDEDSDDYDFWENILHGSDEDKAEDIELDDDKENDVNAVGKNDWVLVKFCTKKSLKHYVGVVININDDGSPVIKYTRRKSKAETATIFAFPVVDDISELKHREDIVTKLPTPAIGRRGQVTFKISFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01154966;
90% Identity
iTF_00810931;
80% Identity
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