Pgla055952.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- clz9
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000026.1:44078987-44081980[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-11 2e-08 35.6 0.0 3 40 17 55 16 60 0.88
Sequence Information
- Coding Sequence
- ATGCCTAGAAATTATGTGCGCAAAACCAATAATGCATCATAcccaaaagaaaaattattagaGGCTGTTAGAGCAGTGAAAAGTGGGAAATTGTCGGGGTATCAGGCCTCTAAGCATTATGGAATACCCAGACCCACCATAATAAATCGAGTATATGGTCGTAAAGGCCTCAAATCGAATACCTTGGGAAGAGCCGCTATCTTATCTCGGGAAGTGGAAGAAGATCTTGTAAAAAACCTGCGTGACATGGAGAAGCATGGTTTCGGACTGACAAGGAAAGAATTATTAGAGACAGTTGGCCAGTATGTGTCGGATAATAACATTACAAATCCATTTAAAAATGGCGTGCCTGGAGAAGATTGGTTTCTTGCATTTAAAAAAAGGCATAATCTATCGATTAAGAAGCCTCAGCCGGTGGAATATGCGAGAAAACAGGCATGTAGCCCATATATTATTTATCCCTACTTTGACTTACTGGAACAGACATTAACAGAAATGAAATTACTAGACAGACCATCTCACATATGGAATGTTGACGAAACAAGTTTTTCAAAAGATCCTTCTAAGTCAAAAGTAGTTGGAATTAAAGGATTTACTTCGACAAGAACAATCTCTTCTCCTGGAAAGGACAATACCACCGTCCTATTAGGCTGTAACGCTCTTGGAGAAAAAACTCCACCGGTAATAGTGTTCAAGGGGAAGAATGTGTGGGACGACTGGACAACAGACGACGGGTATCCTGGGACAGCATATGCCGCAACCAGTAATGGCTGGATGGAGACAGCGGTTTTCGAAAATTTTTtcgaaaaagtttttttaaaaacagtAGGACCAAAACGTCCCATCCTTTTGATATACGATGGGCACGCAACACATGTTGGTATAAACCTTATTAAAAAGGCTAGAGAAGCtggaattacaattttaaaaatacctCCCCACACCAGCCATCTTTTACAACCACTAGATTTGGCTGTAAATAAATCTTTAAAAGATCGATGGGACGTTGCCCTTGTAAAGTGGCAGAGGTTGAACATTGGGAAGGCGTTGCCAAAAAAAGAGTTTTCTAAAATGCTTGGGCAAATTTGGGGTGCATTGGACCCGGCTATATGTGCAGCTGGTTTTCGAAAAGCAGGGATTTATCCCCTTAATAAAAATGCTATCCCAGAAGATAAGTTCAACCAAGTTCTTCTGCGAGAATGGAAACATAAATTAACATGTGATGCTACGAATATTATCGACGACCCAACTAAGCCGCCACTGAATGAGGTGCCGCTGTGTATTGAGCAGCCCAAATACAAACCGGAGTCGTTGCTAGCTCTCTCTTTAAAAAGCATCGACTTGACTCTAAATATTCGTAATCCTACATTTTCGGATTTCCTACAAAATTCGACAGAAGAATATAGCAGTGATCGTAACTCTTTAAACCAGCTCAGTTATGAATCAACTAGCTCAATGAACATCACGAAGCCCAAAGTTCAAATCTTAGAAAACAGGATTATCAGCTTCGAAGATCTACTATTATCAAGAATAAAAGCAGGGACCAGCTCCAAAACTAAAAGAAAGCGTATGGCAACTGGAGCTGAAGTAATAACCCGTGGCGATGTGTTAATAACTTTGGAGAAAATAGATAaggaaaaaaaatctaaatcagtTTTGACAAAGCTACAAGAAAAAAAAGCAAAAGCCGagcaaaaaattgaaaatcacgtACAGGAAACTAAACATAACCCAAAACGAAGAAAAGAAAATATACCAGAACAAAATCAAAAAAGAGGACAAAACTCAAAAGCAATAGCAGAGGAAAgctttaaaaaagaaatatgtgAAATTAAAGCGAACCCCAAAAAAAATGAACAAAAAGGACAAATCTCAAAAACAGTGAAAAAAAGAAAAGCgagaaataataatagaaaaaaacgaAAACATTCTTCTTCGAGTAACACTGACACAGAAATTAAATACGACGAAGATAGCGACGATTATGATTTTTGGGAAAAAATACTGCATGGTAGTAGTGATGATGACAATGTAGAAGATATAGAACTCGACGATGACAAGGAAAACTGTGTTAATGCAGTGGGTAAAAATGATTGGGTGCTTGTTAAATTTTGCACAAAAAAGTCGATCAAACATTACGTAGGagtagttataaatataaatgatgaCGGTTCTCCTGTAATACAGTATACAAGAAGGAAATCAAAATCAGAAACATCAACTATTTTTGCTTTCCCTGTAGTGGACGACATCTCAGAACTTAAACACACCGAGGACATTATCACAAAATTGCCTACACCTGCAATTGGTCGAAGAGGTCAAGTTACTTTTAAAATGtcttttaattcttttaatattCAGTAG
- Protein Sequence
- MPRNYVRKTNNASYPKEKLLEAVRAVKSGKLSGYQASKHYGIPRPTIINRVYGRKGLKSNTLGRAAILSREVEEDLVKNLRDMEKHGFGLTRKELLETVGQYVSDNNITNPFKNGVPGEDWFLAFKKRHNLSIKKPQPVEYARKQACSPYIIYPYFDLLEQTLTEMKLLDRPSHIWNVDETSFSKDPSKSKVVGIKGFTSTRTISSPGKDNTTVLLGCNALGEKTPPVIVFKGKNVWDDWTTDDGYPGTAYAATSNGWMETAVFENFFEKVFLKTVGPKRPILLIYDGHATHVGINLIKKAREAGITILKIPPHTSHLLQPLDLAVNKSLKDRWDVALVKWQRLNIGKALPKKEFSKMLGQIWGALDPAICAAGFRKAGIYPLNKNAIPEDKFNQVLLREWKHKLTCDATNIIDDPTKPPLNEVPLCIEQPKYKPESLLALSLKSIDLTLNIRNPTFSDFLQNSTEEYSSDRNSLNQLSYESTSSMNITKPKVQILENRIISFEDLLLSRIKAGTSSKTKRKRMATGAEVITRGDVLITLEKIDKEKKSKSVLTKLQEKKAKAEQKIENHVQETKHNPKRRKENIPEQNQKRGQNSKAIAEESFKKEICEIKANPKKNEQKGQISKTVKKRKARNNNRKKRKHSSSSNTDTEIKYDEDSDDYDFWEKILHGSSDDDNVEDIELDDDKENCVNAVGKNDWVLVKFCTKKSIKHYVGVVININDDGSPVIQYTRRKSKSETSTIFAFPVVDDISELKHTEDIITKLPTPAIGRRGQVTFKMSFNSFNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154965; iTF_00926531; iTF_00044388; iTF_01158727; iTF_01161258; iTF_00407501; iTF_00407499; iTF_00810931; iTF_00810932; iTF_00699109; iTF_01161260; iTF_01428984;
- 90% Identity
- iTF_01154965;
- 80% Identity
- -