Hvit018518.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- clz9
- Assembly
- GCA_951804965.1
- Location
- OX638097.1:21308331-21316514[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-11 1.7e-08 34.9 0.0 2 41 16 56 15 60 0.92
Sequence Information
- Coding Sequence
- ATGCCCAGAAATTATGTGCGGAAAACGAATATTGCGTCCTACCCACGTGAAAAGTTATTAGAGGCTGTTAGAGCAGTGAAAAGTGGGAAACTGTCGGGTTATGAGGCCTCTAAGCATTATGGAATACCTAGACCTACCATAATAAATCGAGTATATGATCGTAAAGGCCTCAAATCAAATACTTTGGGGCGAGCTACTATCTTATCTCGGGAAGTAGAAGAAGATCTTGTAAGAAACCTGCGTGACATGGAGAAGCATGGTTTTGGACTGACAAGGAAAGAAATATTAGAGACAGTGGGCCAGTATGTGTCGGAAAATGACATCAAAAATCCGTTTAAAAATGGCGTGCCCGGGGAAGATTGGTttctttcatttaaaaaaaggcATAATCTATCAATTAAGAAGCCGCAGCCGGTGGAATATGCAAGAAAACAGGCATGTAGCCCATTTATTATATATCCCTACTTTGATTTGCTAGAACAAACACTCACAGAACTCAAATTACTAGACAAACCATCTCATATATGGAATGTCGATGAAACAAGCTTTTCAAAAGATCCTTCTAAGTCAAAAGTAGTTGGAATTAAAGGATTTACATCGACGAGAATAATCGCTTCTCCTGGAAAGGATAATACCACCGTCCTATTAGGCTGTAACGCTCTTGGAGAAAAAACTCCACCGGTAATTGTATTCAAGGGGAAAAATGTGTGGGACGAATGGACAACAGACGACGGGTATCCTGGGACAGCATATGCTGCAACCAGTAATGGCTGGATGGAGACAGcggttttcgaaaactttttcgAAAAAGTGTTTTTAAAAACAGTAGGACCAAAACGTCCCATCCTTTTGATATATGACGGACACGCAACACATGTTGGTATAAACCTTATTAAAAAAGCTAGAGAAGCTgatattacaattttaaaaatacctcCACACACCAGCCATCTTTTACAGCCACTAGATTTGGCtgtaaataaatctttaaaagATAAATGGGACGTTGCCATTGTAAAGTGGCAGAGGTTGAACATCGGAAAGTCGTTGCCAAAAAAAGATTTTGCGAAAATGCTTGGACAAATTTGGGGTGGATTGGACCCGGCTATATGTGCAGCTGGTTTTCGAAAAGCGGGGATATACCCTCTTAATAAAAATGCTATCCCAGAAGATAAGTTCAACCAAGTTCTTCTGCAAGAATGGAAACATAAAGCAACATGTGATGCTACGAAGATTATCAAAGATCCTACTAATCAAAAGCCACCTAAATACAAGCCGGACTCGTTGCTAGCTCTCTCTTTAAAAAGCATCGACTTGACTCTAAATATTAGTCATCCTATATTTTCGGATTTCCCACAAAATTCGACAAAAGAATATAGTAGTGGTCGTAACTCTTTCAACCAGCTCAGTTATGAATCAACTAGCTCAGTGAACATCAGGAAGCCCACAGTTCAAATTCTAGAAAACAGGATTATCAGCTTCGAAGATCTACTATTATTGAGAATAAAAGCAGGTACCAGCTTCAAAACTAAAAGGAAGCGTATGGCAACTGGAGCTGAAGTAATAACCCGTGACGATGTATTAATAAATTTGGAGAAAACAGAGCAGGAAAAAAAAAGTCAGACAAAGCTACAAGAAAAAGCAAAAGCAgagcaaaaaattaaaaaccacGTACAGGAATCTAAACACGACGCAAAACGAAGAAAAGAAACTATACCAGAACAAAATCAACAAAGAGGACAAAACTCAAAAGCAATAGCagagaaaaacattaaaaaagacATACGTGAAATTAAAGAGAACCCACAAAATAATgaacagaaaaatataacagaACAAAATCAACAAAGAGGACAATACTCAAAAGCAATAGCAGaggaaaacattaaaaaagacATACGTGAAATTAGAGATAACCtacaaaaaaatgaacaaaaaggaCAAAACTCAAAAACAGTGATAAAAAGAAAACCGATAaacaataatagaaaaaaacaaaaatattcgtCTTCAAGTGACACTGACACAGAAATTAAATACGACGAAGATAGCGACGATTATGATTTTTGGGAAAATATACTGCATTGTAGTGATGAAGACAAAGCAGAAGATATAGAACTCGACGATAACAAGGAAAACTATGTTAATGCAGTGGGTAAAAATGATTGGCACGCCTCGCCTGCCGCCAGCGCTCCGCCAGCAGCCGTCAGTAGCGCGAGGCGAGGGGGCCGCCGCCGCCAGCAGCCGTCAGTAGCGCGAGGCGAGGGGGCCGCCGCCGCCAGCAGCCGTCAGTAG
- Protein Sequence
- MPRNYVRKTNIASYPREKLLEAVRAVKSGKLSGYEASKHYGIPRPTIINRVYDRKGLKSNTLGRATILSREVEEDLVRNLRDMEKHGFGLTRKEILETVGQYVSENDIKNPFKNGVPGEDWFLSFKKRHNLSIKKPQPVEYARKQACSPFIIYPYFDLLEQTLTELKLLDKPSHIWNVDETSFSKDPSKSKVVGIKGFTSTRIIASPGKDNTTVLLGCNALGEKTPPVIVFKGKNVWDEWTTDDGYPGTAYAATSNGWMETAVFENFFEKVFLKTVGPKRPILLIYDGHATHVGINLIKKAREADITILKIPPHTSHLLQPLDLAVNKSLKDKWDVAIVKWQRLNIGKSLPKKDFAKMLGQIWGGLDPAICAAGFRKAGIYPLNKNAIPEDKFNQVLLQEWKHKATCDATKIIKDPTNQKPPKYKPDSLLALSLKSIDLTLNISHPIFSDFPQNSTKEYSSGRNSFNQLSYESTSSVNIRKPTVQILENRIISFEDLLLLRIKAGTSFKTKRKRMATGAEVITRDDVLINLEKTEQEKKSQTKLQEKAKAEQKIKNHVQESKHDAKRRKETIPEQNQQRGQNSKAIAEKNIKKDIREIKENPQNNEQKNITEQNQQRGQYSKAIAEENIKKDIREIRDNLQKNEQKGQNSKTVIKRKPINNNRKKQKYSSSSDTDTEIKYDEDSDDYDFWENILHCSDEDKAEDIELDDNKENYVNAVGKNDWHASPAASAPPAAVSSARRGGRRRQQPSVARGEGAAAASSRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154966;
- 90% Identity
- iTF_00810932; iTF_01161260; iTF_01428984; iTF_00699109;
- 80% Identity
- iTF_00810932;