Basic Information

Insect: Parnassius smintheus
Gene Symbol: -
Assembly: GCA_036936625.1
Location: JAUPFT010000001.1:14486662-14504535[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.00089 0.29 13.9 0.7 1 23 171 193 171 193 0.98

2 31 0.0002 0.066 15.9 0.6 2 21 227 246 226 247 0.93

3 31 2.6e-05 0.0084 18.8 0.4 3 23 279 300 277 300 0.96

4 31 4.8 1.6e+03 2.2 0.2 2 14 320 332 319 340 0.81

5 31 0.014 4.5 10.2 2.9 1 23 350 373 350 373 0.96

6 31 0.0011 0.34 13.7 0.1 1 23 389 411 389 411 0.96

7 31 0.0004 0.13 15.0 1.9 2 23 452 473 451 473 0.97

8 31 0.00045 0.15 14.8 3.9 2 23 514 536 514 536 0.97

9 31 0.00012 0.038 16.7 1.4 1 23 586 609 586 609 0.97

10 31 0.00085 0.28 14.0 0.1 1 23 668 690 668 690 0.97

11 31 0.033 11 9.0 6.3 2 23 702 723 701 723 0.96

12 31 0.073 24 7.9 2.3 2 23 735 756 734 756 0.96

13 31 0.015 5 10.0 1.1 1 23 766 788 766 788 0.98

14 31 0.00042 0.14 14.9 6.7 1 23 816 838 816 838 0.97

15 31 0.00063 0.2 14.4 6.5 1 23 849 871 849 871 0.98

16 31 0.00068 0.22 14.3 0.7 1 23 879 901 879 901 0.97

17 31 0.0011 0.36 13.6 0.1 2 23 921 943 920 943 0.97

18 31 1.1 3.5e+02 4.2 1.0 1 23 961 983 961 983 0.91

19 31 0.066 22 8.0 4.6 1 23 990 1012 990 1012 0.98

20 31 0.0024 0.79 12.5 4.7 2 23 1023 1045 1022 1045 0.95

21 31 0.0045 1.5 11.7 0.2 2 23 1068 1089 1067 1089 0.95

22 31 6.7 2.2e+03 1.7 5.9 2 23 1132 1154 1131 1154 0.94

23 31 0.0046 1.5 11.7 0.2 2 23 1170 1191 1169 1191 0.95

24 31 0.17 54 6.8 4.5 3 23 1199 1219 1197 1219 0.96

25 31 0.023 7.3 9.5 0.9 2 23 1230 1252 1229 1252 0.95

26 31 0.6 2e+02 5.0 3.2 2 23 1269 1287 1269 1287 0.88

27 31 3.4 1.1e+03 2.7 1.0 2 21 1291 1310 1291 1311 0.93

28 31 0.36 1.2e+02 5.7 1.9 2 23 1360 1381 1359 1381 0.93

29 31 0.00037 0.12 15.1 0.7 2 23 1392 1414 1391 1414 0.96

30 31 2.4 7.7e+02 3.1 0.3 3 23 1431 1448 1430 1448 0.78

31 31 1.8 5.9e+02 3.5 4.8 2 21 1452 1471 1451 1472 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.00089	0.29	13.9	0.7	1	23	171	193	171	193	0.98
2	31	0.0002	0.066	15.9	0.6	2	21	227	246	226	247	0.93
3	31	2.6e-05	0.0084	18.8	0.4	3	23	279	300	277	300	0.96
4	31	4.8	1.6e+03	2.2	0.2	2	14	320	332	319	340	0.81
5	31	0.014	4.5	10.2	2.9	1	23	350	373	350	373	0.96
6	31	0.0011	0.34	13.7	0.1	1	23	389	411	389	411	0.96
7	31	0.0004	0.13	15.0	1.9	2	23	452	473	451	473	0.97
8	31	0.00045	0.15	14.8	3.9	2	23	514	536	514	536	0.97
9	31	0.00012	0.038	16.7	1.4	1	23	586	609	586	609	0.97
10	31	0.00085	0.28	14.0	0.1	1	23	668	690	668	690	0.97
11	31	0.033	11	9.0	6.3	2	23	702	723	701	723	0.96
12	31	0.073	24	7.9	2.3	2	23	735	756	734	756	0.96
13	31	0.015	5	10.0	1.1	1	23	766	788	766	788	0.98
14	31	0.00042	0.14	14.9	6.7	1	23	816	838	816	838	0.97
15	31	0.00063	0.2	14.4	6.5	1	23	849	871	849	871	0.98
16	31	0.00068	0.22	14.3	0.7	1	23	879	901	879	901	0.97
17	31	0.0011	0.36	13.6	0.1	2	23	921	943	920	943	0.97
18	31	1.1	3.5e+02	4.2	1.0	1	23	961	983	961	983	0.91
19	31	0.066	22	8.0	4.6	1	23	990	1012	990	1012	0.98
20	31	0.0024	0.79	12.5	4.7	2	23	1023	1045	1022	1045	0.95
21	31	0.0045	1.5	11.7	0.2	2	23	1068	1089	1067	1089	0.95
22	31	6.7	2.2e+03	1.7	5.9	2	23	1132	1154	1131	1154	0.94
23	31	0.0046	1.5	11.7	0.2	2	23	1170	1191	1169	1191	0.95
24	31	0.17	54	6.8	4.5	3	23	1199	1219	1197	1219	0.96
25	31	0.023	7.3	9.5	0.9	2	23	1230	1252	1229	1252	0.95
26	31	0.6	2e+02	5.0	3.2	2	23	1269	1287	1269	1287	0.88
27	31	3.4	1.1e+03	2.7	1.0	2	21	1291	1310	1291	1311	0.93
28	31	0.36	1.2e+02	5.7	1.9	2	23	1360	1381	1359	1381	0.93
29	31	0.00037	0.12	15.1	0.7	2	23	1392	1414	1391	1414	0.96
30	31	2.4	7.7e+02	3.1	0.3	3	23	1431	1448	1430	1448	0.78
31	31	1.8	5.9e+02	3.5	4.8	2	21	1452	1471	1451	1472	0.94

Sequence Information

Coding Sequence: ATGTGTGGATTTTGTCACCCTTTAGAGATATATGAAGGAGATGGACTACCAGATAAAATATGCTCGGAGTGTATACAGAAACTCAGCAGCGCGCATATATTTAAGCAGCAGTGCGAGAGATCCGATCAGGAGCTACGACGCAACTATGTGCCGCCGCCAGGTTTCAGTACCGCACCTTCCCCACCAAACAGACAGAGCAGCGACTCGGCTTTTTCAAACAATACTGACGTATCCAGCAACAATAAGCCTACAGCGTCACCCATAGAAAGTAAGGCCACACCAAGTCGGAGCCGCAAACGTAGTCGGGAGAGCGTTGACAATGCTTCATCCAGCAGCCAGTCCCATGACTACCGACCGAGTTCCACCAAGCGCGTTGAGGAGCTCCGGACCTCACAGAAAAGACCGAGAAAATCACCAAACACATCTTACGCTGATTCTGATTTTGACGATAACAGCGCCTCCCATTTCTCAGTCGAAACCGATTCGGATGAGCCACTATTGAAAAGCGAATATAGGTGCAAAATCTGTGGTAAAGAATTCCTTTCAAAAATGAGTGTGACTGCACACACAAAAGTGCATTATAGAAAATCTCTGACCAAGAATGCATTAGTGGACGTACCGAAACCGGCAGACACCAATGAGAGTGTGGAAGATGCTAATGATGTCGATGATAAACTAACGTGCGAGAAATGCGATAAGACgtttaaattgaaaataatgttGAAGCGTCATCTAGAGACCTGTGACAAGACTCCGTCGAAGTCACCGATGAAAGAGTTACTGGTGTCGTTGGAGCCAATCGACGCAGGTCCGGCACCGTCGAATAAATTGGACTGCGAAATGTGCACTACAAAATTTAAGACGATAGAAAATTTAGAGAAACATATGAGGGTAGTTCACGCAGCCGTCCTCAAGCGTGATAAATACGAACAGAAGGAGAACGGAAAGGTGAGCGTCCCCTGCTTCTACTGCGGAATACATTTTGACGATTACTACCTACACGCTGCGCACTTTGAAACCTGTTCCAAAAAGGACGATTCTGTTAGCTTTACTTGTCCCGTATGCCAGAAGGTAATGACAAGGAAGAACTCGTACTTCATTCATTTAAAACATATGCATTTCGAGGCTCGACTCGACAATCGTGAAGAGGGCTCCAAACAGCCGTTTGAGTGTCGCATATGCAGTAAGAAGTTGGCAACACAAGACCAGCTAATCACACACCTTGCTGCCCACATGTCTAATATAAACGACAATGAAGATGGCGCTGACGATGGTTCTCGTATGAGTCACGCAGAAGACGATACTTCGGTAACATCTAGCTACAGCAATGCGCATGTACCCAGCGGGCCATTAAAATGCAGCATGTGCGAAAAACGGTTCACTTACAAGAAGGCTCTCCTGAGTCACGAACAGAGACATCTCTCCGGAGACTTGGAGATAAAGACAGAGCCACCCGACAAGAATACGTCTAGCAGTCTGTTAAGCGAGACATTCCGTCAATCGGAGTCGGATTCTAGTCAGGAGGAAGGAGATGATAATACGTGCgacatttgcgagaagcaattcTCCTATAAACGTCTCCTGATTCATCACAAGCGGACCAAGCACAATATGAGCTCAGGCACCAAGCGAGCTAAAATTAACCTTAAGGATTGCTCCGTCCGATGTCTGATCTGCGACTTGGAGATGAAAGTTAGTGCAATAAATGAGCACAATCAAAAGCACACATCTGTAAATATAAAGCCGAGAAATCTCTACACGTGTGCGGAGTGCTCCGAGAAGTTTAAGAGTTGTAGCTCGCTGGCAAATCACATCAAACTGGTGCACAGGCTGAAGCAGCCCCAGCAGCCCAAGCAGCCTAAGTTAGAGGGAGCCGATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGTATCAAACCAGAGTCACAACGACTTTGGGATGGTTCCGTCGAATCAGGACGGCAGTCCGCTTGTTAATTTGAGCGGATTCACTTGCCCAATATGTGGTAAGCAGATGCCTACATTGATTTCACTGAAGAGACATGTGAACTGGCATTCTAACGTTGGTAACACCATTGAGAAGAAGTTGGAGTGTTTTGTGTGTAAAGAGAAATTCAGATTTCAATGCCATTACCGGCTGCACATGCGCGAGCACTACAACGACCCCAATCTGGACCCGAAGCTGCTAACTTGTACTATTTGCAACCGCAAGAGCAAGCATCTGCGTGCTGCGAAGGCCCATATGAACTTCCACAAGCAAACACGCTTCAAGAACAAAGACTACCAGTGCTCTATATGCAAGAGAATATTCCAATTTAGAAAAGTCTACTTGTCGCACATGGCAATACATTATAAACGCGGGGAGAGCGTGAACACTGTTGTGGGTATCGAGCTGCCGAATACCGCTGATAGAACAGTATTCGATGGAAAATATACCTGCCATCACTGCGGGAAAGTGTGCGATTCGGAGACCTCGTTAAAGCACCATATTATTTGGCACAAATCTAAAACTTCGCTCTTTGGTGCTCGCCACGAATGTCACATTTGTCATATCCAATTCACCAACAAGAGGAGATTAGAGCTCCACATCAGAACTCATTACGAGGACGACAATGGGCCATTTAAGTGTCCCGTATGTGGCAAAGGGTTTATTGACGAGGATTACCACAGGAGACATGTGAAAGGGCACAATTTCGATCACCAATCACATAAGACTAGGATTGCAAACCTCCGGAAGGATAAAGTGAAGTGCCCGATTTGCGCCCGTTTCTATCCAGACTTAGTGAAACTCATACGCCATTTAAGAAGAACCCATCCTGAGAGCAAAATGATTAAGGAAGATCCAGATGCACCTGCCCAGAACTACTTCTCGTGCAAACTGTGTGCTAAAGTATTTTTAGATGAGCGACGATTGCAGCACCATGAGGAGGCTCATTTGAGAAAGCCAGAGTTCTTTAAATGCAAATTCTGTGGCAAAAAAACCATCTCCTTGAAGAATCATAGAATTCACATTAAGTCCCACTTAACACAAAAATATATTGACGAGCCCCTGAAATGTATGCATTGTGATGAAACCTTTACAAGAGGGTATGACTTGCACCATCACTTACGTGATGTGCATGATATTAATGAGACATGGATTGCTGAGAGAACAGAGAAGACTTTAAATGGGCCATTGAAGGAATTGCAGTGCTCCATCTGTCTTAAGATCCTAGCCAGTAAGGGCAACTTTGAACGCCATATTGACTATCACAACTCGCTTAGGTGTAATTACTGCTTTGACTACTTTAGCTCTTTGAGGTTCTTAGAGGGGCATTTAGCATTCAGCTGTGAGAAAAAGAAATTGATAGGGGACACTGAAGTGTATCCCAAGAAGGTAAAGTGTCACATATGTTACAAAGCTTTCCATCTACAAGTGAAGTTAGACTGTCATCTACGCACACAGCACAATATTAAAGTTTCTAAAGAAGTATCTGAAGGCAAGAAGGAGATTGTCTGCGATTACTGCTTCCGAGTGTTTGAGAATGAGTATGCTTTGAGTACCCACAAGATTTACCACCGCACAATTGGATATTACGGCTGCTTGTATTGCAATCGAAAGTTCAACACCATTACCCTGTACAAAAAACACAAGAATCATCATTTATCGCAACTTAACGTTGATAACCCTACAAAATGCGAGCACTGCGATGAGAGGTTTGTTGCATTCCGAGAGATGATATATCATATGAGGGATGTTCACGGCGATGAAAAGGAGTGGATTGTAATGCCTAAAGAGTCCATAGAGGAGAAGTGCCCCATTTGTAACAAAATATTCTTTAATCTTCATAAACATTTGACTTATCATGAAGAGAACAGGTGCAAAAAATGCGCAGAATATTTCTATTCACAAATTGACTTCGATAATCACCTCTGTGCCATAGAAAGCGACGAGGAAGTAGACGATACTAATGAGAACGATCTACGACCAAAATATGAAGAGTGTGCTTTTTGCTTCAAGCCCACAACTAAGAAGAACTCGCAGCGTTTGCATGATCACATACATAAAGTCTCTGGATCGATTTCGTGCCGATTTTGTCATCTCaaatttaaaactattgatgCGTTTAACATTCACGCATTCTCCCACCGTAGCAGGAAGTACAATAAAAAGCCGATTAAATGTCGAAAGTGTGGCGAGAAGTTTGTGCGCTATGGCCCCTTCATGAAGCACATGAAGTCTGTGCATAAGTCAACTCAGAAATTACATTATAGAACCATGGTAAAGCCAGAACCTTGTGCTGTTTGTGGTGAAGAGTTCCCAAATCTCCATAACCACTATCGAGCTCACTTGCAGAACCAGTGTCAATCATGTCACAAATACTTTACGTCATATAAACTATTTTCAATGCATCAGTGTGATAAAGAAGATTCTGACCCAACTAAAGTTTTCACATGTGATAAAGATCTAGTAAATTTGATTAATGCTTACACACCTAAAGACGAGAATGATgatgagaagttctatgggcatCCTGATGATGAAGACGAAGTAGAGGAGGAACCTGAAAAAGATATTCGAGACAATGAATATACAACACAGGATGAAGAGAGTCAGAACTCATCAGATGCAAACTTACATATGATGGTCCATACGCCTATTAtatcagatgtgttgtcactttaCCAAAAGAAGGAAGACAAGCAACTGGATCCTgctaatgaagttgttaatttgtCAGATGACGACACTTTGGACGGTGAAGAAGTTGTAACTGTTATAACAATTGATGATTGA
Protein Sequence: MCGFCHPLEIYEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSTAPSPPNRQSSDSAFSNNTDVSSNNKPTASPIESKATPSRSRKRSRESVDNASSSSQSHDYRPSSTKRVEELRTSQKRPRKSPNTSYADSDFDDNSASHFSVETDSDEPLLKSEYRCKICGKEFLSKMSVTAHTKVHYRKSLTKNALVDVPKPADTNESVEDANDVDDKLTCEKCDKTFKLKIMLKRHLETCDKTPSKSPMKELLVSLEPIDAGPAPSNKLDCEMCTTKFKTIENLEKHMRVVHAAVLKRDKYEQKENGKVSVPCFYCGIHFDDYYLHAAHFETCSKKDDSVSFTCPVCQKVMTRKNSYFIHLKHMHFEARLDNREEGSKQPFECRICSKKLATQDQLITHLAAHMSNINDNEDGADDGSRMSHAEDDTSVTSSYSNAHVPSGPLKCSMCEKRFTYKKALLSHEQRHLSGDLEIKTEPPDKNTSSSLLSETFRQSESDSSQEEGDDNTCDICEKQFSYKRLLIHHKRTKHNMSSGTKRAKINLKDCSVRCLICDLEMKVSAINEHNQKHTSVNIKPRNLYTCAECSEKFKSCSSLANHIKLVHRLKQPQQPKQPKLEGADLADFCEVVVTKAEPLVSNQSHNDFGMVPSNQDGSPLVNLSGFTCPICGKQMPTLISLKRHVNWHSNVGNTIEKKLECFVCKEKFRFQCHYRLHMREHYNDPNLDPKLLTCTICNRKSKHLRAAKAHMNFHKQTRFKNKDYQCSICKRIFQFRKVYLSHMAIHYKRGESVNTVVGIELPNTADRTVFDGKYTCHHCGKVCDSETSLKHHIIWHKSKTSLFGARHECHICHIQFTNKRRLELHIRTHYEDDNGPFKCPVCGKGFIDEDYHRRHVKGHNFDHQSHKTRIANLRKDKVKCPICARFYPDLVKLIRHLRRTHPESKMIKEDPDAPAQNYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKSHLTQKYIDEPLKCMHCDETFTRGYDLHHHLRDVHDINETWIAERTEKTLNGPLKELQCSICLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLIGDTEVYPKKVKCHICYKAFHLQVKLDCHLRTQHNIKVSKEVSEGKKEIVCDYCFRVFENEYALSTHKIYHRTIGYYGCLYCNRKFNTITLYKKHKNHHLSQLNVDNPTKCEHCDERFVAFREMIYHMRDVHGDEKEWIVMPKESIEEKCPICNKIFFNLHKHLTYHEENRCKKCAEYFYSQIDFDNHLCAIESDEEVDDTNENDLRPKYEECAFCFKPTTKKNSQRLHDHIHKVSGSISCRFCHLKFKTIDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVRYGPFMKHMKSVHKSTQKLHYRTMVKPEPCAVCGEEFPNLHNHYRAHLQNQCQSCHKYFTSYKLFSMHQCDKEDSDPTKVFTCDKDLVNLINAYTPKDENDDEKFYGHPDDEDEVEEEPEKDIRDNEYTTQDEESQNSSDANLHMMVHTPIISDVLSLYQKKEDKQLDPANEVVNLSDDDTLDGEEVVTVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157036;
90% Identity: iTF_01157036;
80% Identity: -