Basic Information

Insect: Parnassius smintheus
Gene Symbol: -
Assembly: GCA_036936625.1
Location: JAUPFT010000025.1:14633609-14635984[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.24 67 5.9 1.9 18 43 9 31 5 37 0.74

2 13 0.017 4.8 9.6 0.0 18 43 68 90 65 92 0.85

3 13 0.0008 0.22 13.8 0.5 17 44 98 122 95 122 0.92

4 13 0.042 12 8.3 0.7 18 44 129 152 127 152 0.93

5 13 0.002 0.57 12.5 1.4 14 43 156 182 153 183 0.88

6 13 0.17 47 6.4 1.8 17 44 188 212 184 212 0.88

7 13 0.024 6.6 9.1 0.6 12 38 214 237 212 243 0.77

8 13 0.23 65 5.9 0.3 15 44 262 288 254 288 0.83

9 13 4.6 1.3e+03 1.8 0.2 13 43 312 339 306 340 0.82

10 13 0.96 2.7e+02 4.0 0.0 15 44 373 399 369 399 0.77

11 13 0.51 1.4e+02 4.9 2.7 11 43 417 446 413 447 0.83

12 13 0.019 5.2 9.4 2.9 6 43 470 504 467 505 0.83

13 13 0.022 6 9.3 1.9 18 43 637 659 619 660 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.24	67	5.9	1.9	18	43	9	31	5	37	0.74
2	13	0.017	4.8	9.6	0.0	18	43	68	90	65	92	0.85
3	13	0.0008	0.22	13.8	0.5	17	44	98	122	95	122	0.92
4	13	0.042	12	8.3	0.7	18	44	129	152	127	152	0.93
5	13	0.002	0.57	12.5	1.4	14	43	156	182	153	183	0.88
6	13	0.17	47	6.4	1.8	17	44	188	212	184	212	0.88
7	13	0.024	6.6	9.1	0.6	12	38	214	237	212	243	0.77
8	13	0.23	65	5.9	0.3	15	44	262	288	254	288	0.83
9	13	4.6	1.3e+03	1.8	0.2	13	43	312	339	306	340	0.82
10	13	0.96	2.7e+02	4.0	0.0	15	44	373	399	369	399	0.77
11	13	0.51	1.4e+02	4.9	2.7	11	43	417	446	413	447	0.83
12	13	0.019	5.2	9.4	2.9	6	43	470	504	467	505	0.83
13	13	0.022	6	9.3	1.9	18	43	637	659	619	660	0.82

Sequence Information

Coding Sequence: ATGTTTCACAATCAATTGGACTACGTGTGCGACTACTGTAGCCGAACCTTCACCCGGAAATACAATTTGCAGACTCATATTGAAAACTATCACATGAACTCCTCATGCTATTGTGATATATGCGACCAGAGGTTTGGCACACCGGCCGGACTACAGTTGCATCTCTCCAGAGGCCACAACAGATATGGCCAACCATTCCCAGAATGCGATCTGTGTGGTCGAATATTCACGAGGAAACAAAACATTACCTCACATATGATAACAGTACATTTGCAAGGCGTGCGACCAGATATCAGATGCAAATTCTGCGACAAAACGTTCACCACAGAAAGGAATTTAAAGAGGCATCTGAATCAATTACACAATCCCCATTTAGAGTACCCCACTTGCGACAACTGTAATAAAGTTTTCAAGGGTAAACACTCCCTGATAGCCCACATTCAATCTACCCATAATGTTACTGAGAAGGGATTAATCAAATGCCATCTCTGTGAAAAAGTTTACACAAATAATCGCAATTTGAAAAGGCATGTCGAAATGTTTCACGGTGAGAGAGGAGAATTCCGCTGTAATGCTTGCCCTAAAGTCTATACGTCTAATCAGAGCTTGAGGAGGCATACGAAGACTAGGCACAATCCTGAACATTGGACTGAATACAAGTGTGATTTCTGCAACAAAACAATAGTCGGAAAAGAGAATTTCAACAATCACGTCACTTTCTACCACAGGAAAAGCATTTACAGTTCAAATCAATATGAAGCTTTTGATTTTCGATCAAACTCTAGATCATTCATATGTAGCAAATGCAACAAAACGTTTAAAGAGGAACCTCTTCTGCGCCGCCATGTGAAAACGGAACATTCTTTTCAAGACTTCTATAGATATTGCAAAAAATCTCTTCTCAAATTAATGAAAGAGACCATGGAAACATATaggaataatttttataattgcgAATTCTGCAGAAATGCTTTCCCCAGCATTTTCGAATTAAAGGATCATATGAGAATCAATCATGGCAAAGAGTACAGCATCTCGAACTGTAATGTTTGCTTCAGCAAGTTCTATAGTAGAGAAAGTATGGTGGAGCATAAGAAAATCTGTCTGCCACCACCTAACGTAAATACTTGCAGCCACTGCGATAAACTTTTCACCGATATCTCCAGTCTTGAATTTCATGTGAGAATTTTTCATCCCCAAGCTCACATTGCCGATTCTGTAATTTCCTCCAGTAACATTGATGAAACCTCAATAGAACTCGGTTCTTACAAATGTGCCCACTGTGATCGTATTTACTACAGCGATAGGTCTTTAAAACATCACGTCAAACTAAAGCACACTACCGACGAGGCCATGGAATGTGGTTTTTGCAGGAAAGTCTGCAGTAATAAATATTACTTAGCATCGCATATCAAAATAGTGCACAACAACGACACTTGGTCCAAATGCGACTATTGTGACAAGCAGTTCAAGTCTAAAAGAAACATCCGACGCCATATAGAGTATACTCATCTGGGAATGCAAAGATATAAGTGTATCGAATGTGAGACTTTATTCAAGGAGAAGAGAAGCCTAAGAAAGCATGTTAGAATTAAACATCCCGATTCCACGTCTTTCCCTCAATGTCACATTTGTCAAAAGCGTTTTGAATCCGCTAAATCTTGCAAGATACATCTCAAATTACTCCATTCGTTCAATATGAACACGCATCCTTGCGATCTGTGCTCAGTGTCGTTCGATTCTGTCGACGCACTTAATATTCATCTACAAACCAACCATTTAGCAGAAGACGAAATCTATAAATGCGAAGTATGCAATCTGGTTTTCAAAGGCCAAGAAAAATTCGAACAACATAATCAATTGTCACATGTCAATTTAGTACAGAAGGTAAAGCGTAAAGTTTTGCCGCGTTGTGTCATATGCACAAAGGATTTCAGCACCAGGAAAACACTAAAGCGCCACATAAAGAAGTTCCACGAAGAATTCGATGTTGACGAATTAGCTGCCTCCGGTTGGCGGTTGAGGGAGACCAATGTTGAATGTGAAGACTGCATCAAAAGTTTCAACGACGAATTCCATTTCAATGTGTACCAAGAGTTGAAGCATTTGAGAGAATCTATCATATTCAAATGCGAAACATGCTTCTCATCTTACAATGCATTGGAATACTCCATTTTGAGGTATAAACTCGCCAAAAGTGGTTGTAAAAGTGAATTGATTTTAAGTGAGCTTTGCACTACAGAAATGAGTGATAGTGAAGTAACTCACAACGCCCAATCCACAGAGATCATGGAACCGGAGAGCACTACTAATGACATCAAAGTTGAGCCACCGGATGTTTTATATGAGATTAAGACTGAACCTATGTCTCCGTAA
Protein Sequence: MFHNQLDYVCDYCSRTFTRKYNLQTHIENYHMNSSCYCDICDQRFGTPAGLQLHLSRGHNRYGQPFPECDLCGRIFTRKQNITSHMITVHLQGVRPDIRCKFCDKTFTTERNLKRHLNQLHNPHLEYPTCDNCNKVFKGKHSLIAHIQSTHNVTEKGLIKCHLCEKVYTNNRNLKRHVEMFHGERGEFRCNACPKVYTSNQSLRRHTKTRHNPEHWTEYKCDFCNKTIVGKENFNNHVTFYHRKSIYSSNQYEAFDFRSNSRSFICSKCNKTFKEEPLLRRHVKTEHSFQDFYRYCKKSLLKLMKETMETYRNNFYNCEFCRNAFPSIFELKDHMRINHGKEYSISNCNVCFSKFYSRESMVEHKKICLPPPNVNTCSHCDKLFTDISSLEFHVRIFHPQAHIADSVISSSNIDETSIELGSYKCAHCDRIYYSDRSLKHHVKLKHTTDEAMECGFCRKVCSNKYYLASHIKIVHNNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRIKHPDSTSFPQCHICQKRFESAKSCKIHLKLLHSFNMNTHPCDLCSVSFDSVDALNIHLQTNHLAEDEIYKCEVCNLVFKGQEKFEQHNQLSHVNLVQKVKRKVLPRCVICTKDFSTRKTLKRHIKKFHEEFDVDELAASGWRLRETNVECEDCIKSFNDEFHFNVYQELKHLRESIIFKCETCFSSYNALEYSILRYKLAKSGCKSELILSELCTTEMSDSEVTHNAQSTEIMEPESTTNDIKVEPPDVLYEIKTEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01154409;
90% Identity: iTF_01154409;
80% Identity: iTF_01159885;