Psmi039218.1
Basic Information
- Insect
- Parnassius smintheus
- Gene Symbol
- -
- Assembly
- GCA_036936625.1
- Location
- JAUPFT010000014.1:22361676-22363673[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-07 9.5e-05 24.3 0.0 5 37 1 34 1 41 0.87
Sequence Information
- Coding Sequence
- ATGAAAGATGCTGTGAAAAATGTGGTTGAAGGAAAAATGGGCTACAAGCTTGCAGCAAAATCATTTTCTGTCCCACAGACAACTTTAGAAAGAAAAGTGAAGCTTGCGCGAGAAAGTTTAGATAAGAATGATCCAATGACTGTTAAATTTAAGGTACCGTTAGGCCCAAAAGAGCAAGTTTTTACTGATAATGAAGAGGAAGAGCTATGTAAATACATAATAGATATGGAGAGCAGGCTTTATGGACTGACAATGAAAGATTTAAGAGGTTTAGTCTATAGACTAGCGGTAAAAAATAACAAACGTCATCCGTTTAACAATGAAAAAGAAGAAGCCGGGAAAGACTGGGCATTAGGATTTTTAAAAAGGCACCCAGAACTGTCTATTAGACAGCCTGAAAGTACCTCATCCGCACGTGCTGCTGGTTTCAATAAACAGGTGGTAGACCAGTTTTTCAATTTTTTGGGCAATGTTTACGATGAACATCATCTAACACCTGATCGTATATACAACTGCGATGAAACTGGTATTTCAGTTGTGCCCAAAACGAAATCAAAAATTATCGCAAGAAAGGGCAGAAAGCAAGTGGGAGCCATAACATCTGCTGAACGAGGTACGACCATTACAGTAGAAATCTGTTTTAGTGCTAGTGGTAATTTTATGCCACCCATGATGGTATATCCTAGAAAAAGAATGGATCCGCAACTTATGATTAATGCTGCCCCCGGAGCTTGGGGAGTTTGCAGTGATTCGGGCTGGATGACTTCAGAACTTTTCCTAGATTGGTTTAAAAAGTTCGTCGAATTTAGCGGAGCAACACCTGAGCGTCCTGTTTTGTTATTATTGGATGGACATAGTACTCATACGAAGAACATTGACCTCATAAATAAAGCACGCACTCACGGCGTTATCATTTTATGTTTCCCACCACATACAACTCACCGTCTTCAGGTTGCAGACGTTGCTTACATGAGACCGTTAAGTACCTACTACGATCATCAAATCATGGCGTGGCTTCGCAGCAACCCAGGGATGACTGTCACTGTCCGACAAGTAGCTGAAATTTTTGGAAAGGCGTTCATACAAGCGTCTACGATGTCAACAGCTGTCAATGGTTTTAAGAAATGTGGGATTTGGCCATATGATCCAACAGTATTCTCTGAGACCGACTTTGCTCCATCTTTGATGACAGATATTCAGCTTAATGTATCCGACGCACCTGCAAGCGATAATAGTTCGTTGATAATGGAATCGTCATCCACAGAACCAGCAACAAATAATCAGAATGCACCAATTATATCTGAAGCCATTTCTGTTGCGGCAACTTTGACGGATGCAGCAGTGACGCCAGTAACAGTGGAAACAGAAACGTTGTCGAGACTTGTTACTGCCGCTAGTACTTCTGCGAGTCCGTCACTATCAACTAATCTGGTTACTGCACTTACTGTGCTACATAATACAATGTCTACCCCTGAACCAGGATGTTCTTACTGGCTCGATAACTCCGATCTACACGAAAGACCACGAACTCCGCAGCAATCAATATTTGGTGTTGTAAGTCCGCAGCAAATAATGCCCTTTCCAGCAACTACAAAAACATCTCGCTCAACTAGAAAACGAGGAAAAACCGCGGTGATCACATCTTCGCCGTATAAGAATGAGTTAGAAGAAACGATTAAGAAAAAGGAACAAGCGGAAGAGGATAAACAGAGAAAAAAAGAGTTGAGGGAacttaaaaaatctgaaaaagaCCCGGCAACTAAGAAGAAAAGAGTAACAAAGAAGAAACAAGGGGctaagaatagatcattaaacGAGAATAGTGACAGCGATATTGAAAATACACCTTGTTTGTATTGTAAAGGCCTATATTTGGACTCAAATGAAGGCTGGGCTGCTTGTTCAGCATGCGGCAAATGGGCTCACTGCAGCTGTGCAGGTGTGGACGACGAAGATGCAGATACCGTGTTCACTTGTGAACATTGTGAACAGTCCTAA
- Protein Sequence
- MKDAVKNVVEGKMGYKLAAKSFSVPQTTLERKVKLARESLDKNDPMTVKFKVPLGPKEQVFTDNEEEELCKYIIDMESRLYGLTMKDLRGLVYRLAVKNNKRHPFNNEKEEAGKDWALGFLKRHPELSIRQPESTSSARAAGFNKQVVDQFFNFLGNVYDEHHLTPDRIYNCDETGISVVPKTKSKIIARKGRKQVGAITSAERGTTITVEICFSASGNFMPPMMVYPRKRMDPQLMINAAPGAWGVCSDSGWMTSELFLDWFKKFVEFSGATPERPVLLLLDGHSTHTKNIDLINKARTHGVIILCFPPHTTHRLQVADVAYMRPLSTYYDHQIMAWLRSNPGMTVTVRQVAEIFGKAFIQASTMSTAVNGFKKCGIWPYDPTVFSETDFAPSLMTDIQLNVSDAPASDNSSLIMESSSTEPATNNQNAPIISEAISVAATLTDAAVTPVTVETETLSRLVTAASTSASPSLSTNLVTALTVLHNTMSTPEPGCSYWLDNSDLHERPRTPQQSIFGVVSPQQIMPFPATTKTSRSTRKRGKTAVITSSPYKNELEETIKKKEQAEEDKQRKKELRELKKSEKDPATKKKRVTKKKQGAKNRSLNENSDSDIENTPCLYCKGLYLDSNEGWAACSACGKWAHCSCAGVDDEDADTVFTCEHCEQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157642;
- 90% Identity
- iTF_01156318;
- 80% Identity
- -