Psmi014765.1
Basic Information
- Insect
- Parnassius smintheus
- Gene Symbol
- -
- Assembly
- GCA_036936625.1
- Location
- JAUPFT010000005.1:41688621-41689139[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-08 1.9e-05 26.5 0.0 4 41 20 57 17 60 0.90
Sequence Information
- Coding Sequence
- ATGCCGTTTCAATACAAACCCCAAGGCACTACCCGTCGCAGAAAATTTACAAAGCGTGACCTTGAGCAAGCTATTAGTGAGATTCAGGGAGGTGCTTCTATTAGAAAAACAGCCATAAAATATGACATTGATAGAACGACTCTAAGAAAGTACCATGTTAGCGGTGAagcaacattaaataaaatagaagaaaaaggTAGTCAGTACAAAAGCTCGCAGATTTTTGACAATAGGGAAGAAAAGCAATTAGTAAACTACCTTTTGTCATGCAGTAAAATGCACTATGGACTGACGAGAAAACAAGCCATGCAATTAGCCTTTGATTATGCtctagcaaataataaaaaaataccacaAAGTTGGACAAATAACAATTCTGCCGGAAAAGATTGGTTTCGAGGTTTCTTAGCTCGAAACCCGGAAATAAGCTTAAGGACGCCTGAAGCGAGCTACAagtttcaacaaaaaaaatgtaGCAGACTTTTACGAAAACTTGAAGCAAGTGCGAGAAAAGTATAA
- Protein Sequence
- MPFQYKPQGTTRRRKFTKRDLEQAISEIQGGASIRKTAIKYDIDRTTLRKYHVSGEATLNKIEEKGSQYKSSQIFDNREEKQLVNYLLSCSKMHYGLTRKQAMQLAFDYALANNKKIPQSWTNNNSAGKDWFRGFLARNPEISLRTPEASYKFQQKKCSRLLRKLEASARKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158796;
- 90% Identity
- iTF_01158874;
- 80% Identity
- -