Psmi002210.1
Basic Information
- Insect
- Parnassius smintheus
- Gene Symbol
- clz9
- Assembly
- GCA_036936625.1
- Location
- JAUPFT010000001.1:43339772-43340851[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-09 3.4e-07 32.1 0.0 5 37 1 33 1 37 0.95
Sequence Information
- Coding Sequence
- ATGAAAGAGGCTGTAAATAAAGTCCAGAACAAAGAGTTGACCTTACGTAAGGCTGCTGAGATTTTTGCAGTACCGTTCACGAGCTTACAGAGAAGAGTTACTTTATCCAGGGGTATTATTAAGCGTCGAGGTGGACAGCCAGCTTTAGATGAGAACGCAGAAAAGAAGTTAGCTGACCGGCTATTGCACTTGGCAAGTCGTAGCTTCGGAATTACACCCAAAGCGGTACGTAAGTACGCGTTTGAATTTGCAGAACgtcaaaacataaaacacaaatttgACAGAAATGCTGGAATGGCTGGCCAGGACTGGTTTCATCGCTTcatgcaaagaaataaaaaattaactattcgGAAGCCGGAGGGTCTGTCAAGAGCAAGGTGTGATGGTATGAAGAAGGAAAAAGTAGCAGAATTCTTTAATACTTTGGAAACAGTAGTAGATAACAACAATTTAAGAGGAAGACCTGAATGTGTATACAATGTTGATGAAACGGGTATGCCGCTTAGTAACCGCCCACCCAACATTATAGCCCAAAAAGGTGCTAAAGATGTTGTCAGCATGACTAGTGTTGAACGAGGTGAAAATGTAACCGTTCTAGCCTGTATGAATGCAGCAGGACAGTACATACCTCCATTTGTTCTATTCAAAGGTGTGCGTAAACGTGACGATTTTCTCCTAGGTATGCCACCTGGTACTGAAGTTGCCATGACAGAAAACGGCTGGGTCACCGAAGAAGCTTTTAAGTTGTGGCTGCAACATTTCAATCGCTACCGGACCCCAGGAAAAGTAGTTCTAATTTTGGATGGGCATGCGTCTCACACCAGCTACTCAGTGGTAGACTTGTGTGACTCTTTCGAAATTGAACTTGTACTTCTTCCTCCACACACATCACATGCCCTGCAACCGCTCGATGTATCGTTTTTCAAACCGCTCAAAACCTATTATCACCAACAAGCTACAGCATGGCAACATTCACATCCCAATCAAGGAATCACAAAAGTCGCTTTCGGAGCCCTTTTCCAACGGGCTTGGAATCAGGCTGCCACTGTTGGGAATGCTACAAAAGGCTTCGAATAG
- Protein Sequence
- MKEAVNKVQNKELTLRKAAEIFAVPFTSLQRRVTLSRGIIKRRGGQPALDENAEKKLADRLLHLASRSFGITPKAVRKYAFEFAERQNIKHKFDRNAGMAGQDWFHRFMQRNKKLTIRKPEGLSRARCDGMKKEKVAEFFNTLETVVDNNNLRGRPECVYNVDETGMPLSNRPPNIIAQKGAKDVVSMTSVERGENVTVLACMNAAGQYIPPFVLFKGVRKRDDFLLGMPPGTEVAMTENGWVTEEAFKLWLQHFNRYRTPGKVVLILDGHASHTSYSVVDLCDSFEIELVLLPPHTSHALQPLDVSFFKPLKTYYHQQATAWQHSHPNQGITKVAFGALFQRAWNQAATVGNATKGFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01043570;
- 90% Identity
- iTF_01153796;
- 80% Identity
- iTF_01158651;