Basic Information

Insect: Parnassius smintheus
Gene Symbol: ct
Assembly: GCA_036936625.1
Location: JAUPFT010000017.1:7626153-7660094[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.7e-27 1.3e-22 81.8 0.0 3 70 134 202 132 208 0.94

2 3 7.8e-32 1.8e-27 97.4 0.0 4 77 534 608 532 610 0.96

3 3 9.4e-31 2.2e-26 94.0 0.0 3 75 742 815 740 819 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.7e-27	1.3e-22	81.8	3	70	134	202	132	208	0.94
2	3	7.8e-32	1.8e-27	97.4	4	77	534	608	532	610	0.96
3	3	9.4e-31	2.2e-26	94.0	3	75	742	815	740	819	0.95

Sequence Information

Coding Sequence: ATGCTCCGGTCGCTAGATCTGAGTTCTGAACGACCTCTGGACCGCAAGCCGGAGCCTCTGCGATCTCCGCCAGCTCCGCGAGAAGAGCGGAGTTCGGCGGAACGTGAACGTAGCACAGAAAGGCGGGATACAGGTGGCGACGAGTGGCCCAGCACGCCGCCCCCGCTAAATAACAACACCACGCACCACAACAACAACGGCCCGCTGCAGCTGCCCTTGCCGCCGCCGAGTCCCTTCCGCTTCGAGGAGCACCGCCCCTACCGCTTCGCCGAGGACATGGGCCCCCTCCCACCGGGCGCGCTCGTCGGACGACTGGGGGACTCCCTGATCCCCAAGGGAGACCCGATGGAGGCGAGACTGCAGGAGATGCTGCGATACAATATGGACAAATACGCGAACACGAATCTCGACACGCTGCATATAAGCCGGAGAGTGAGAGAACTGCTTTCGGTCCACAATATAGGCCAGCGGTTGTTCGCGAAGTACGTCCTTGGGCTATCGCAAGGTACGGTGTCGGAGTTACTGTCCAAACCAAAGCCTTGGGATAAGCTGACAGAGAAAGGACGAGATTCGTATAGGAAAATGCATGCGTGGGCCTGCGACGAGGCCGCGATCATGCTACTGAAGTCCCTCATTCCCAAAAAAGTGGGAACAAAAGATGGCACGCTGGGACCGAACTTCGGAAGACCGGAAGGAGAAGGCGATGATCGTCTTGCCCACATTCTTAACGAGGCTTCTCACATGATGAAAACACCCACTGGCCAAGTCAACAACGATGACTCCCGAAGCAACGACGACTCTTGCTCACCACGCACTCAATGTCCCTCTCCGTTTTCCAATAAGGATTCGAGTCAAAACAGACGACTTAAGAAATACGAAAACGATGACATTCCCCAGGAGAAGGTAGTCCGCATCTACCAGGAGGAGCTCGCCAAAATCATGACGAGGCGGGTGGAAGACATGCGGCATACTCGCGAAGGTTTCCCTGGCATGTTTCCACCATTTTTCAGCGGCGGCATGCCCCCGCACATGGAGAGGCCACCGGAAGACATCAGAATAGCGCTGGAAGCGTACCATAGGGAGCTTGCCAAAATGCAGCCGGGGGCAAACATGCCCAACATCCACAACCTACCTGGCATGCCTCCATTTCCAAACCTCCTCGCTCTGCAGCAACAAGCGATGCAAGCGAACCAGCACATGAACGGTTCAGGGGCCGTCCAGGACCTTTCACTACCCAAAGACAAGAACACCAAATTAAATGGAATGACTGATAGTGATAAGGATAAACCGATGGACGCGGAAGAGGCGATAAGGCACGCGGGCAGTGCGTTCTCCCTCGTAAGGCCGAAGTTAGAACCGGGGCAACAATCTACTGGTTCTTCGGCGTCCAGTCCTTTAGGCAACGCCATACTACCGCCGGCGATAACGCCGAACGACGATTTCAGCAGTTCAGCGGCCGCCAGTCCTCTACAAAGAATGGCGTCGATCACAAATAGCCTTATTTCTCAACCAACAAACCCCCCACATCATCCGCCACCGCAAAGATCAATGAAAGCGGTACTGCCACCAATCACACAGCAACAGTTTGATCtctttaataatttaaacacGGAAGAAATCGTCAGGAGGGTGAAGGAAGCTTTAAGTCAATACTCTATCAGCCAAAGACTCTTCGGCGAATCAGTATTAGGCCTATCCCAGGGGTCGGTCAGCGATTTGCTGGCGAGGCCGAAGCCATGGCACATGCTGACGCAAAAAGGCAGGGAACCGTTCATTCGAATGAAAATGTTCCTGGAGGACGACAACGCGGTCCACAAGCTGGTCGCGTCGCAGTACAAAATTGCACCAGAGAAGCTAATGAGGACTGGAAACTACAGCGGAGCACCTCcatGTCCGCCAAATATGAACAAGCCGATGCCGCCGACGCCGAAGATGATCTCGGACGCGACGTCGTTGCTGAGCAAAATGCAGCAAGAACAGCTGCTGGGCGGGGGTCACGCGGGGCATGGTGGTCACGTGGGGCACGGCGGCCACGCGGGGCACGCGGGGCACCTGGGGCACCTGGCAGGCGCGCCGCTGCTCCTGACGCCGCCAGGCTTCCCTCCCCACCACGCCGTAACGCTGCCGCCACAACACCATGACAAGGACAGGAAGCCGCCGCCGGCCATGCGGCCCGTGCACCAGCACATCTCCCCCAGCGTCTACGAGATGGCTGCGCTCACGCAGGATCTCGACACGCAGACCATCACCACGAAAATAAAGGAGGCGCTGCTCGCGAACAACATCGGTCAGAAAATCTTCGGCGAGGCGGTTCTCGGTCTGTCGCAGGGCTCGGTTAGTGAGCTTCTATCGAAGCCGAAGCCCTGGCACATGCTTAGCATCAAGGGTCGCGAGCCATTCATCAGGATGCAGCTGTGGCTCAGCGACGCGCACAACATCGATCGCCTCCAGGCGCTCAAGAACGAGAGGCGTGAAGCGAACAAGAGACGGAGATCGAGCGGTCCCGGCCAAGACAACTCCTCCGACACGTCGTCCAACGACACCTCAGAGTTCTACCACTCCAGCTCACCAGGGCCCACTTCGGGAGTCCCGTCGGCCAAAAAGCAGCGTGTGCTCTTCTCCGAGGAACAGAAGGAAGCACTGAGATTAGCGTTTGCGCTCGATCCGTACCCGAATATGCCCACAATAGAGTTCCTGGCGGCGGAGCTGGGACTCTCGACGAGGACCATAACCAACTGGTTCCACAATCACCGTATGCGGTTAAAGCAACAAGCCCCTCACGGTCTCCCGGCAGAACCACCGGCGAGAGAACAGTCTTCCGCGCCGTTCGACCCCGTTCAGTTCCGGTTGCTGCTCAACCAGAGGCTGCTGGAGCTACAGAAGGAAAGAATGGGTTTCGCCGGTGTACCGCTCCCGTATCCACCGTACTTCGCGGCCAATTCCAATTTTGCTGCGTTGATCGGTAGAGGCCTCTTACCTCCGGAGGAACCGGCGAAAGATACGTCTAGTGGCCTCGATCTCTCCATGCCCTTGAAGAGGGAGCCGGACGGGGACGACTTCGAAGACGACGACGTGGAAAGCAACCTCGGATCCGAGGACTCCCTGGACGAGGAATCGAAGACTGAGCCGAAAGCGGCATCGACTCCCGCCGGCAGGTCGAACAGGAGAAAACCGGCGGCGCCACAGTGGGTCAATCCAGACTGGCAGGACGAGAAACCTCGAAACCCCGACGAGGTCATCATAAATGGAGTCTGTGTGATGAGGAGCGATGACTTCAGGCGGGAGGCGGAGGAAACCGTGAGGGTAGAACCTTCTCCGGTGCCGCGGGAAACGTCACCCGCCGCCTCCCCACCACAGGCTTCCCCCCACACGACACACTCCCCGGAAGTGTTGCCCGAAGacaaaattaaaacggaaaacgAAGACGACCGGTGGGAGTATTAG
Protein Sequence: MLRSLDLSSERPLDRKPEPLRSPPAPREERSSAERERSTERRDTGGDEWPSTPPPLNNNTTHHNNNGPLQLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTLGPNFGRPEGEGDDRLAHILNEASHMMKTPTGQVNNDDSRSNDDSCSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHTREGFPGMFPPFFSGGMPPHMERPPEDIRIALEAYHRELAKMQPGANMPNIHNLPGMPPFPNLLALQQQAMQANQHMNGSGAVQDLSLPKDKNTKLNGMTDSDKDKPMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSSSAAASPLQRMASITNSLISQPTNPPHHPPPQRSMKAVLPPITQQQFDLFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTPKMISDATSLLSKMQQEQLLGGGHAGHGGHVGHGGHAGHAGHLGHLAGAPLLLTPPGFPPHHAVTLPPQHHDKDRKPPPAMRPVHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPAREQSSAPFDPVQFRLLLNQRLLELQKERMGFAGVPLPYPPYFAANSNFAALIGRGLLPPEEPAKDTSSGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPAGRSNRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPRETSPAASPPQASPHTTHSPEVLPEDKIKTENEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01338275;
90% Identity: iTF_01147214;
80% Identity: iTF_01158587;