Basic Information

Insect: Papilio polytes
Gene Symbol: ct
Assembly: GCA_000836215.1
Location: NW:97208-246325[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.5e-27 2.1e-23 81.6 0.0 3 70 345 413 343 419 0.94

2 3 4.8e-32 2.9e-28 97.1 0.0 4 77 743 817 741 819 0.96

3 3 5.7e-31 3.4e-27 93.7 0.0 3 75 945 1018 943 1022 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.5e-27	2.1e-23	81.6	3	70	345	413	343	419	0.94
2	3	4.8e-32	2.9e-28	97.1	4	77	743	817	741	819	0.96
3	3	5.7e-31	3.4e-27	93.7	3	75	945	1018	943	1022	0.95

Sequence Information

Coding Sequence: ATGCACCCGACGGGCGCGGCCAGCCTGCCCGCCGCACCGGAGGCGGAGGTGCAAGCTATGCACTCCATGGACTGGCTCTTCAAGAAGGAAAGGATATACCTCCTAGCACAGTTCTGGCAACAGagAGCTACACTGGCGGAGAAAGAAGTGACAACACTCAAGGAGCAGCTCGCCACAACCAGCCCCGTGCCTCTCCAAGCCACTGTACCGCCGAAGACCAATGGCTCTCATATAGAATCCATGAGAGATCAAGCAACAGAAACCAGATTACAAGAGAGACTGAGCCCAGATATCAAAGAAGAGAAGAGAAGGTCGCCCGAGATTGATGAagatatagaacataaaaTAGAAATGGCTGCAACTGGACGAAGCAATAGCAATTCAACGAGAAGCAGCCCTGTGGTTCACCAGGGGAGTAATCTGGAGATCGAACTCGCGGCCAAAGAGAAAGagATCGCACAACTGGTAGAAGACGTACGGCGACTCCAGGCGTCGCTTTCAGCGCTGCAAGAAGCACACGCACAGCAGCTGCAGCGGTTAGAAGAGAGGTTGGATGAAAAGAAGCAGCACATCGCACGCCTTGAAGCCCGCCTTGACACGCAGCGTGACTACGATGATATCAAGCGAGAAATCAGTATGCTGCGGTCTTTAGACTTAAGTTCAGACCGGCCTGTGGACCGCAAGCCGGAGCTGCGGTCCCCCGTGGTCCCGCAAGAGGACCGCGCGTCCGCGGAACGCGAACGCAGCGCGGAACGAAGAGACACCGGTGGCGACGAGTGGCCGAGCACGCCGCCTCCGCTAAACAACAACACAACGCACCACAACAACAACGGCCCCCTGCCGCTACCACTGCCGCCGCCGAGCCCCTTCCGCTTCGAGGAACACCGGCCGTACCGCTTCGCGGAGGACATGGGACCGCTACCACCCGGAGCGCTTGTCGGCCGTCTCGGGGACTCACTCATACCCAAGGGGGACCCGATGGAGGCACGTCTGCAGGAGATGCTGCGGTACAATATGGACAAGTACGCGAATACGAACCTGGACACTCTGCACATCAGCCGACGAGTGCGGGAACTGCTCTCGGTGCACAACATCGGGCAGCGGCTGTTCGCGAAGTACGTGCTGGGCCTGTCGCAGGGCACCGTCTCGGAGCTGCTCTCGAAACCGAAGCCTTGGGACAAGTTGACAGAGAAGGGGCGGGACTCATACAGGAAGATGCATGCGTGGGCGTGCGACGAGGCGGCCATCATGCTACTCAAGTCCCTCATTCCTAAAAAAGTCGGTACGAAAGATGGCACGGTGGGTCCAAACTTCGGCAGGAGCGATGGCGAGGGTGACGACCGATTGGCGCATATCCTCACCGAAGCATCCCACATGATGAAGACTCCCACAGGACCCGTTACTAACGATGACTCAAGGAGTAACGAGGATTCCAGCTCACCCCGAACACAGTGCCCTTCACCCTTCTCAAATAAGGATTCAAGTCAAAACAGAAGATTGAAGAAGTACGAGAATGACGATATCCCTCAAGAGAAGGTGGTCCGGATCTACCAGGAGGAGCTCGCGAAAATCATGACGCGACGGGTCGAGGACATGCGCCACAGTCGCGAGGGCTTCCCtggCGGCGGCATGCCACCGCACATGGAACGGCCGCCCGAAGACATCCGCATGGCGCTCGAGGCGTATCACCGCGAGTTCGCCAAGATGCAGCCCGGCGCCAACCTGCCCAACTTGCCCAACCTGCACGGACTGCCCGGCGTGCCCGGAGTGCCCCCTTTCCCCAACCTGCTGGCCCTGCAGCAGCAGGCCATGCATGCAAACCAGCATATGAACGGTGCTGGAGCAGTGCAGGACCTCTCGCTTCCCAAAGAAAAGAACGCCAAAATGAACGGAATGACTGATAGCGATAAGGACAAACCCATGGACGCGGAGGAAGCGATACGGCACGCGGGCAGCGCCTTCTCCCTCGTGCGGCCCAAGCTGGAGCCCGGGCAGTCCACTGGCTCCCCGGCCTCCAGCCCGCTCGGTAACGCAATCCTCCCGCCGGCTATCACGCCAAACGAGGACTTCGGCGGCTCAGCGGCCGCCAGCCCCTTGCAAAGGATGGCGTCAATCACGAATAGCCTGATCTCTCAACCGTCGAATCCTCCTCACCACCCACCGCCCCAGAGATCTATGAAGGCGGTTCTCCCTCCGATAACACAGCAACAGTTCGACCTCttcaacaatttaaatacagaaGAGATCGTGAGACGAGTAAAGGAGGCCTTAAGTCAGTACTCCATAAGTCAGAGGCTCTTCGGAGAATCAGTGCTCGGTCTGTCTCAAGGATCTGTAAGCGATTTGTTAGCAAGGCCGAAGCCGTGGCACATGCTGACGCAGAAAGGACGGGAGcccttcatccgcatgaagaTGTTCCTGGAGGACGACAACGCGGTACACAAGCTGGTCGCCTCGCAGTACAAGATCGCACCGGAGAAGCTGATGCGGACCGGCAACTACAGCGGAGCACCTCCATGTCCGCCAAACATGAACAAGCCGATGCCACCCACACAGAAGATGATCTCCGACGCGACGTCCTTGCTGAGCAAGATGCAGCAGGAGCAGCTGCTGAGCTCAGGCCACCTCGGCCACCTGGGCCAGCCCACCCCGCTGCTGCTCACCCCGCCCGGCTTCCCTCCGCACCACGCCGTCACCTTGCCCCCGCAGCACCACGACAACAACAAGGAACGGAAACCGCCTCCCCCTCCGCAGCCGCTGCACCAACCTCCAGTGATGCGAGGGATGCACCAACATATCTCCCCGAGCGTATACGAAATGGCCGCCTTAACGCAGGACCTGGACACACAGACGATTACGACCAAAATAAAAGAGGCCCTTCTAGCGAACAACATTGGACAGAAAATATTCGGAGAAGCCGTTCTCGGATTATCTCAAGGATCAGTTAGCGAGCTTCTGTCAAAACCTAAACCCTGGCACATGCTCAGCATCAAAGGCCGCGAGCCCTTCATAAGAATGCAGCTTTGGTTGAGCGACGCGCACAACATTGATCGCCTTCAAGCGCTTAAGAACGAGAGACGCGAAGCCAACAAGAGACGAAGGTCGAGTGGGCCCGGCCAAGACAACTCATCTGACACCTCGTCAAATGACACGTCAGAATTCTACCATTCGAGTTCACCGGGCCCCACGTCAGGGGTTCCGTCAGCCAAGAAACAAAGAGTATTATTCTCCGAGGAACAAAAAGAAGCTTTAAGACTAGCATTTGCTCTAGATCCATATCCCAATATGCCTACGATAGAATTCTTGGCGGCAGAGCTAGGCCTTTCGACGAGAACGATCACTAATTGGTTTCACAATCATCGAATGCGGTTAAAGCAGCAGGCACCGCACGGATTGCCGGCCGAGCCCCCCGCTAGGGACCAATCCTCCGCGCCCTTCGATCCGGTGCAATTCCGATTACTCCTCAACCAGAGATTACTCGAACTCCAAAAGGAGCGAATGGGTCTCGCAGGAGTACCGCTCCCTTATCCCCCGTACTTTGCCGCGAATTCAAATTTTGCCGCATTAATCGGTAGGGGTCTATTACCACCCGAAGAGCAGACGAAGGACGCCTCGAGCGGTCTCGATCTCTCCATGCCCCTGAAAAGGGAGCCGGACGGAGACGATTACGAGGACGACGATGTGGAAAGCAACCTCGGGTCCGAGGACTCGCTTGACGACGAATCGAAGACTGAGCCCAAAGCGGCATCGACGCCCGCGGGCAGATCGAATAGAAGAAAGCCGGCGGCGCCGCAGTGGGTGAACCCTGACTGGCAGGACGAGAAGCCTCGGAATCCCGATGAAGTTATCATTAATGGTGTTTGTGTAATGAGGAGCGACGACTTCAGACGGGAGGCGGAGGAGACTGTGAGGGTGGAGCCGTCCCCGGTGCCGCGCGAGCCTTCTCCGACGCAGTCGCCGGTCCAGCCCTCCCCGCACACGCACTCCCCTGAAGTCCTCCCTgaagacaaaattaaaacggAAAACGAGGACGACAGGTGGGAGTATTAG
Protein Sequence: MHPTGAASLPAAPEAEVQAMHSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLATTSPVPLQATVPPKTNGSHIESMRDQATETRLQERLSPDIKEEKRRSPEIDEDIEHKIEMAATGRSNSNSTRSSPVVHQGSNLEIELAAKEKEIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRSLDLSSDRPVDRKPELRSPVVPQEDRASAERERSAERRDTGGDEWPSTPPPLNNNTTHHNNNGPLPLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTVGPNFGRSDGEGDDRLAHILTEASHMMKTPTGPVTNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHSREGFPGGGMPPHMERPPEDIRMALEAYHREFAKMQPGANLPNLPNLHGLPGVPGVPPFPNLLALQQQAMHANQHMNGAGAVQDLSLPKEKNAKMNGMTDSDKDKPMDAEEAIRHAGSAFSLVRPKLEPGQSTGSPASSPLGNAILPPAITPNEDFGGSAAASPLQRMASITNSLISQPSNPPHHPPPQRSMKAVLPPITQQQFDLFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLSSGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNKERKPPPPPQPLHQPPVMRGMHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALIGRGLLPPEEQTKDASSGLDLSMPLKREPDGDDYEDDDVESNLGSEDSLDDESKTEPKAASTPAGRSNRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPREPSPTQSPVQPSPHTHSPEVLPEDKIKTENEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00887212;
90% Identity: iTF_01147306; iTF_01138859; iTF_01138754; iTF_01149364; iTF_01149490; iTF_01153749; iTF_01153644; iTF_01158587; iTF_01158506; iTF_01144348; iTF_01144453; iTF_01312030; iTF_01312129;
80% Identity: iTF_01147306;