Basic Information

Insect: Parnassius orleans
Gene Symbol: -
Assembly: GCA_029286625.1
Location: JAGSMP010000053.1:605091-607465[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0058 3.6 9.7 0.0 18 43 32 54 28 56 0.85

2 15 0.00028 0.17 13.9 0.5 17 44 62 86 59 86 0.92

3 15 0.025 15 7.7 0.3 18 44 93 116 92 116 0.92

4 15 0.00072 0.44 12.6 1.4 14 43 120 146 117 147 0.88

5 15 0.18 1.1e+02 4.9 0.8 18 44 153 176 148 176 0.89

6 15 0.15 93 5.2 0.9 12 37 178 200 176 207 0.75

7 15 0.9 5.5e+02 2.7 0.4 17 40 228 248 220 252 0.71

8 15 0.82 5e+02 2.8 0.1 13 43 276 303 271 304 0.86

9 15 0.34 2.1e+02 4.0 0.0 15 44 337 363 333 363 0.77

10 15 0.15 91 5.2 2.4 11 43 381 410 377 411 0.83

11 15 0.59 3.6e+02 3.3 7.2 4 29 403 428 401 440 0.76

12 15 0.0082 5 9.2 3.1 6 43 434 468 432 469 0.82

13 15 5.2 3.2e+03 0.3 1.2 17 44 474 498 471 498 0.83

14 15 0.0063 3.9 9.6 2.3 6 43 587 623 582 624 0.77

15 15 6.2 3.8e+03 0.0 0.0 12 27 638 653 627 668 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0058	3.6	9.7	0.0	18	43	32	54	28	56	0.85
2	15	0.00028	0.17	13.9	0.5	17	44	62	86	59	86	0.92
3	15	0.025	15	7.7	0.3	18	44	93	116	92	116	0.92
4	15	0.00072	0.44	12.6	1.4	14	43	120	146	117	147	0.88
5	15	0.18	1.1e+02	4.9	0.8	18	44	153	176	148	176	0.89
6	15	0.15	93	5.2	0.9	12	37	178	200	176	207	0.75
7	15	0.9	5.5e+02	2.7	0.4	17	40	228	248	220	252	0.71
8	15	0.82	5e+02	2.8	0.1	13	43	276	303	271	304	0.86
9	15	0.34	2.1e+02	4.0	0.0	15	44	337	363	333	363	0.77
10	15	0.15	91	5.2	2.4	11	43	381	410	377	411	0.83
11	15	0.59	3.6e+02	3.3	7.2	4	29	403	428	401	440	0.76
12	15	0.0082	5	9.2	3.1	6	43	434	468	432	469	0.82
13	15	5.2	3.2e+03	0.3	1.2	17	44	474	498	471	498	0.83
14	15	0.0063	3.9	9.6	2.3	6	43	587	623	582	624	0.77
15	15	6.2	3.8e+03	0.0	0.0	12	27	638	653	627	668	0.86

Sequence Information

Coding Sequence: ATGTTCCACAATCAACTTTACAGGTTTGGCACACCGGCCGGACTACAGTTGCATCTCTTCAGAGGCCACAACAGATACGGCCAACCATTCCCAGAATGCGATTTGTGCGGTCGAATATTCACGAGGAAACAAAACATTACCTCTCATATGATAACTGTACATTTGCAAGGCGTGCGACCAGATATCAGATGCAAATTCTGCGACAAAACTTTCACCACAGAAAGGAATTTGAAGAGGCATCTGAATCAATTACACAATCCCCATTTAGAGTACCCCACTTGCGACGACTGTAACAAAGTTTTCAAGGGTAAACACTCCCTGATAGCCCACATTCAATCTACCCATAATGTTACTGAGAAGGGATTAATCAAATGCCATCTCTGTGAAAAAGTCTACACAAATAATCGGAATTTGAAAAGGCATGTCgaaatgtttcatggtgagagAGAAGAATTCCGCTGTGACGTTTGCCCTAAAGTCTATACCTCTAATCAGAGCTTAAGAAGGCATACAAAGACTAGGCATAATCCTGAACATTGGACTCAATACAAATGTGAATTCTGCAACAAAATCGTAATCGGAAAAGAGAATTTCAACAATCATGTCACTTTCTACCACAGGAAAAACATTTACAGTTCAAATCAATATGACACTTTTAATTTTCGATTAAACTCTAGACAATTTATTTGTAGCAAatgcaacaaaacatttaaagagGAACCTCTTCTGCGCCGTCATGTGAAAATCGAACATTCTTTTCAAGATTTCTATAGATATTGCAAAAAATCGCTTCTTGAACTAATGAAAGGGACCATGGAAACTTAtaggaataatttttataattgcgAATTCTGCAGAAATGCTTTCCCTAGCATTTACGAATTAAAGGATCATATGAGAATCAATCATGATAAAGACTACTGCCTCTCAAACTGCAACGTTTGCTTCTGCAAGTTCTACAGTAGAGAAAGTATGGTAGAGCATAAGAAAATATGTCTGCCACCACCTAACGTAAATACTTGCAGTCACTGCGATAAACTTTTCACCGATATCTCCAGTCTTGAATTTCATGTGAGAATTTTTCATCCCCAAGCTCACATTGCCGATTCTGTAATTTCCTCCAGTAACATTGATGAAACCTCAATAGAACTCGGTTCTTACAAATGTGCCCACTGTGATCGTATTTACTACAGTGATAGGTCTTTAAAACATCACGTCAAACTAAAGCACACTACCGAGGAGGCCATGCAATGTGGTTTTTGCGGGAAAATCTGCAGCAATAAATATTACCTGGCATCGCACATCAAAATAGTGCACAACAACGACACTTGGTCTAAATGCGACTATTGTGACAAGCAGTTCAAGTCTAAAAGAAACATCCGCCGCCATATTGAGTATACTCATCTTGGAATGCAAAGATATAAATGTATCGAATGTGAGACCTTATTCAAGGAGAAAAGAAGCCTCAGGAAGCATGTTAGAATCAAACATCCCAATTCCACGTCTTTCCCGCAATGTCACATTTGTCAGAAGCGTTTCGAATCCGCTAAATCTTGCAAGATACATCTCAAATTACTCCATTCGTTCAATATGAACACGCATCCTTGCGATCTGTGCTCAGTGTCGTTTAATTCTGTCGAAGCTCTTAACATTCATCTACAAACCAAACATTTAGCAGAAGACGAAATCTATAAATGCGAAGTATGCAATCTAGTTTTCAAAGGCCAAGAGAAATTCGAAcaacataataaattttcacaTGTCAATTTAGTACAGAAGACAAAGCGTAAAGTATTGCCGCGTTGTGTCATATGCACAAAGGATTTCAGCACTAGGAAAACACTAAAACGGCACATAAAGAAGTTCCACGAAGAATTCGATGCTGACGAATTAGCTACTTACGGTTGGCGGTTGAGGGAGACCAACGTTGAATGTGAAGACTGCATCAAAAGTTTCAACGACGAGTTCCACTTCAATGTGTATCAAGAGCTGAAGCATTTGAGAGAATCTATCATATTCAGATGCGAAACATGTTTTTCATCTTACAATGCATTCGAATACTCCATTCTGAGGTATAAACTCGCCAATTTAAGTAGTTGTAAAAGTAAATTGGTTTTAAGTGAGCTTTGCACTGCAGAAATGAGTGATAGTGAAGTAACTCACAACGCTCAATCCACCGAAATCATGGAACCGGAGAGCACCACTAATGACATCAAAGTTGAGCCACCGGATGTTTTATATGAGATTAAGACTGAACCTATGTCTCCGTAA
Protein Sequence: MFHNQLYRFGTPAGLQLHLFRGHNRYGQPFPECDLCGRIFTRKQNITSHMITVHLQGVRPDIRCKFCDKTFTTERNLKRHLNQLHNPHLEYPTCDDCNKVFKGKHSLIAHIQSTHNVTEKGLIKCHLCEKVYTNNRNLKRHVEMFHGEREEFRCDVCPKVYTSNQSLRRHTKTRHNPEHWTQYKCEFCNKIVIGKENFNNHVTFYHRKNIYSSNQYDTFNFRLNSRQFICSKCNKTFKEEPLLRRHVKIEHSFQDFYRYCKKSLLELMKGTMETYRNNFYNCEFCRNAFPSIYELKDHMRINHDKDYCLSNCNVCFCKFYSRESMVEHKKICLPPPNVNTCSHCDKLFTDISSLEFHVRIFHPQAHIADSVISSSNIDETSIELGSYKCAHCDRIYYSDRSLKHHVKLKHTTEEAMQCGFCGKICSNKYYLASHIKIVHNNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRIKHPNSTSFPQCHICQKRFESAKSCKIHLKLLHSFNMNTHPCDLCSVSFNSVEALNIHLQTKHLAEDEIYKCEVCNLVFKGQEKFEQHNKFSHVNLVQKTKRKVLPRCVICTKDFSTRKTLKRHIKKFHEEFDADELATYGWRLRETNVECEDCIKSFNDEFHFNVYQELKHLRESIIFRCETCFSSYNAFEYSILRYKLANLSSCKSKLVLSELCTAEMSDSEVTHNAQSTEIMEPESTTNDIKVEPPDVLYEIKTEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01154409;
90% Identity: iTF_01154409;
80% Identity: iTF_01158123;