Basic Information

Insect: Parnassius mnemosyne
Gene Symbol: -
Assembly: GCA_963668995.1
Location: CAVLGL010000087.1:16740111-16742486[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0073 2.4 10.2 1.7 14 43 4 30 2 36 0.73

2 14 0.012 3.8 9.6 0.0 18 43 67 89 64 91 0.85

3 14 0.00054 0.18 13.8 0.5 17 44 97 121 94 121 0.92

4 14 0.036 12 8.0 0.4 18 44 128 151 126 151 0.93

5 14 0.0014 0.45 12.5 1.4 14 43 155 181 152 182 0.88

6 14 0.34 1.1e+02 4.9 0.8 18 44 188 211 183 211 0.89

7 14 0.36 1.2e+02 4.8 1.5 12 37 213 235 211 242 0.75

8 14 1.9 6.2e+02 2.5 0.3 17 40 263 283 254 287 0.73

9 14 1.6 5.1e+02 2.7 0.1 13 43 311 338 306 339 0.86

10 14 0.65 2.1e+02 4.0 0.0 15 44 372 398 368 398 0.77

11 14 0.32 1.1e+02 4.9 2.6 11 43 416 445 412 446 0.83

12 14 0.015 4.8 9.2 3.1 6 43 469 503 466 504 0.83

13 14 0.014 4.4 9.4 1.9 18 43 636 658 617 659 0.80

14 14 4.1 1.3e+03 1.4 0.0 12 27 673 688 665 704 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0073	2.4	10.2	1.7	14	43	4	30	2	36	0.73
2	14	0.012	3.8	9.6	0.0	18	43	67	89	64	91	0.85
3	14	0.00054	0.18	13.8	0.5	17	44	97	121	94	121	0.92
4	14	0.036	12	8.0	0.4	18	44	128	151	126	151	0.93
5	14	0.0014	0.45	12.5	1.4	14	43	155	181	152	182	0.88
6	14	0.34	1.1e+02	4.9	0.8	18	44	188	211	183	211	0.89
7	14	0.36	1.2e+02	4.8	1.5	12	37	213	235	211	242	0.75
8	14	1.9	6.2e+02	2.5	0.3	17	40	263	283	254	287	0.73
9	14	1.6	5.1e+02	2.7	0.1	13	43	311	338	306	339	0.86
10	14	0.65	2.1e+02	4.0	0.0	15	44	372	398	368	398	0.77
11	14	0.32	1.1e+02	4.9	2.6	11	43	416	445	412	446	0.83
12	14	0.015	4.8	9.2	3.1	6	43	469	503	466	504	0.83
13	14	0.014	4.4	9.4	1.9	18	43	636	658	617	659	0.80
14	14	4.1	1.3e+03	1.4	0.0	12	27	673	688	665	704	0.86

Sequence Information

Coding Sequence: ATGTTCCACAATCAAGTTTACGTGTGCGACTACTGCAACCGCACCTTCACCCGGAAATACAATTTACAGACCCATATAGAAAACTATCACATGAACTCCTCATGCTACTGTGACATATGCGACCAGAGGTTTGGCACACCGGCCGGACTACAGTTGCATCTCTCCAGAGGCCACAACAGATACGGCCAACCGTTCCCTGAATGCGATTTGTGCGGTCGAATATTCACGAGGAAACAAAACATTACCTCTCATATGATAACTGTACATTTGCAAGGCGTGCGACCAGATATCAGATGCAAATTCTGCGACAAAACGTTCACCACAGAAAGGAATTTGAAGAGGCATCTGAATCAATTACACAATCCCCATTTAGAGTACCCCACTTGCGACGAgtgtaataaagtttttaagGGTAAACATTCCTTGATAGCCCACATTCAATCTACCCATAATGTTACTGAGAAGGGATTAATCAAATGCCATCTCTGTGAAAAAGTCTATACAAATAATCGCAATTTAAAAAGGCATGTCGAAATGTTTCATGGTGAGAGAGAAGAATTCCGCTGTGACGTTTGCCCTAAAGTCTATACGTCTAACCAGAGCTTAAGAAGGCATACAAAGACTAGGCATAACCCTGAACATTGGACTCAATACAAATGTGAAATCTGCAACAAAATCGTGATCGGAAAAGAGAATTTCAACAATCATGTCACTTTCTACCACAGGAAAAATATTTACAGTTCAAATCAATATGACGCTTTTAATTTACGATCAAACTCTAGACAGTTTATTTGTAGCAAATGCAACAAAACATTTAAAGAGGAACCTCTTCTGCGCCGTCATGTGAAAATCGAACATTCTTTTCAAGATTTTTATAGATACTGTAAAAAATCGCTTCTAGAATTAATGGAAGGGACCATGGAAACTTATaggaataatttttataattgcgAATTCTGCAGAAATGCTTTCCCCAGCATTTACGAATTAAAGGATCATATGAGAATCAATCATGATAAAGACTACTGCCTCTCAAACTGCAACGTTTGCTTCAGCAAGTTCTATAGTAGAGAAAGTATGGTAGAACATAAGAAAATCTGTCTGCCACCACCTAACGTAAATACTTGCAGCCACTGCGATAAACTTTTCACCGATATCTCCAGTCTTGAATTTCACGTGAGAATTTTTCATCCCCAAGCTCACATTGCTGATTCTGTAATTTCCTCTAGTAACATCGACGAAACCTCAATAGAACTCGGTTCTTACAAATGTGCCCACTGTGATCGTATTTACTACAGTGATAGGTCTTTAAAACATCACGTCAAACTAAAGCACACTACCGACGAGGCCAAGGAGTGTGGTTTTTGCGGGAAAGTCTGCAGTAATAAATATTACCTGGCATCGCACATCAAAATAGTGCACAACAATGACACTTGGTCTAAATGCGACTATTGTGACAAGCAGTTCAAGTCTAAAAGAAACATCCGACGTCATATTGAGTATACTCATCTTGGAATGCAAAGATATAAATGTATCGAATGTGAGACCTTATTCAAGGAGAAGAGAAGCCTCAGGAAGCACGTTAGAATCAAACATCCCAATTCCACATCTTTCCCGCAATGTCACATTTGTCAGAAGCGTTTTGAATCCGCTAAATCATGCAAGATACATCTCAAATTGCTCCATTCGTTCAATATGAACACGCATCCTTGCGATCTGTGCTCAGTGTCGTTCAATTCTGTCGAAGCTCTTAACATTCATCTACAAACTAAACATTTAGCAGAAGAGGAAATCTATAAATGCGAAGTATGCAATCTAGTTTTCAATGGCCAAGAGAAATTCGAACAACATAATCAATTTTCACATGTCAATTTAGTACAGACGATAAATCGTAAAGTATTGCCGCGTTGTGTCATATGCACAAAGGATTTCAGCACTAGGAAAACATTAAAACGGCACATAAAGAAGTTTCACGAAGAATTCGATGTTGACGAATTAGCTACCTACGGTTGGCGGTTGAGGGAGACCAACGTTGAATGTGAAGATTGCATCAAAAATTTCAACGACGAATTTCACTTCAATGTGTACCAAGAGCTGAAGCATTTGAGGGAATCTATCATATTCAGATGCGAAACATGTTTTTCATCTTACAATGCATTCGAATACTCCATTCAGAGGTATAAACTCGCCAATTTAAATACTTGTAAGAGTAAATTGATTTTAAGTGAGCTTTGCACTACGGAAATGAGTGATAGTGAAGTAACTCACCACGCCCAATCCACAGAGATCATGGAACCGGAGAGCACCACTAATGACATCAAAGTTGAGCCACCGGATGTATTATATGAGATTAAGACTGAACCTATGTCTCCGTAA
Protein Sequence: MFHNQVYVCDYCNRTFTRKYNLQTHIENYHMNSSCYCDICDQRFGTPAGLQLHLSRGHNRYGQPFPECDLCGRIFTRKQNITSHMITVHLQGVRPDIRCKFCDKTFTTERNLKRHLNQLHNPHLEYPTCDECNKVFKGKHSLIAHIQSTHNVTEKGLIKCHLCEKVYTNNRNLKRHVEMFHGEREEFRCDVCPKVYTSNQSLRRHTKTRHNPEHWTQYKCEICNKIVIGKENFNNHVTFYHRKNIYSSNQYDAFNLRSNSRQFICSKCNKTFKEEPLLRRHVKIEHSFQDFYRYCKKSLLELMEGTMETYRNNFYNCEFCRNAFPSIYELKDHMRINHDKDYCLSNCNVCFSKFYSRESMVEHKKICLPPPNVNTCSHCDKLFTDISSLEFHVRIFHPQAHIADSVISSSNIDETSIELGSYKCAHCDRIYYSDRSLKHHVKLKHTTDEAKECGFCGKVCSNKYYLASHIKIVHNNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRIKHPNSTSFPQCHICQKRFESAKSCKIHLKLLHSFNMNTHPCDLCSVSFNSVEALNIHLQTKHLAEEEIYKCEVCNLVFNGQEKFEQHNQFSHVNLVQTINRKVLPRCVICTKDFSTRKTLKRHIKKFHEEFDVDELATYGWRLRETNVECEDCIKNFNDEFHFNVYQELKHLRESIIFRCETCFSSYNAFEYSIQRYKLANLNTCKSKLILSELCTTEMSDSEVTHHAQSTEIMEPESTTNDIKVEPPDVLYEIKTEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01154409;
90% Identity: iTF_01154409;
80% Identity: iTF_01157024;