Basic Information

Insect: Parnassius apollo
Gene Symbol: LRRFIP2
Assembly: GCA_907164705.1
Location: CAJQZP010001037.1:5919459-5944289[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.7e-76 4.7e-72 243.5 21.3 1 268 177 444 177 463 0.87

2 2 1 2.8e+04 -8.5 18.9 1 48 464 510 464 542 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.7e-76	4.7e-72	243.5	21.3	1	268	177	444	177	463	0.87
2	2	1	2.8e+04	-8.5	18.9	1	48	464	510	464	542	0.70

Sequence Information

Coding Sequence: ATGGGTAAGAAATCGGAGCATACTACACCAGATAATAGTGACGAGGAAAGTGGAGAAGCCTTCACCGATGGTGATTTCGGTGATTCAGATGAAGAGACAGTTCTAGAACGGTCAGATGTTTCTAAATCTGGTCAATTGCCTGTCAATGAGACGGTCAACACCAGTGTCAGAACTGTAAATAACAGTGAAGTAGATGAAGAAGCAATATGTGTGACTAATGGAAATGGGGATGGTGAAGAGgataatgaaaattttgaaaatgggcacGGCTCTCAGTCGGACGAGTTGGACAATTACGTGGATGTTGTCGTGACGGATGCACGAGACGATTCTTATAGCGAGATCAATCCATCGATAATTGGAATTCTCGGAGACCAGCACTCCCATAATAGTAAGTGCCTCGTCAGTGCACGTGCGACGTCAGTGGATAACACTTGTGTTGAATGTAGTGCACGGCAACCTCGACTTTGTGGCATGCTGACAGTAGAGCTACTAATTCGAGCAGCTGCCCGGTTGCTCCTGCTCTACGCTGAGCAGCGGCTGGCAGCGCGACGAGCAGCGCGCGCGGAGGCGCGTGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGATCATGCCGACAAAGCGTTCGACATGTACGCAGAGACGGTGGGACGACGAGGGGGTCGGCTAGCAGCACTGAGTCCGTCTATACACTCGCCGCGTCGCAGTTCCGAGGACTCCGCCGATGATGTCTTCAGTATCAAAGACCTAAGGCACGAGCTGAAAGAGGTGGAGGAAAAGTTCCGCAAGGCGATGATCCTTAACGCGCAGCTGGACAACGACAAGGCCGCGCTTGGCTACCAGCTGGAACTGCTCAAAGACAGGATAGAAGAGCTACAAGAGGAACACGCACAGTTACAGCGGGAACACAAAGAGAAATGCTCGGCGCACGAGCGCCTGAAGCGCGAGCACGCGGCGCTGGAGCGCGAGGTGGCGTGCGCGCGGGACGCAGTGCGCGCGCGTGACGCGGCGGCGGCAGCCGCGGGCTTCGCCTTCGTGGACGCGGCCGCCGAGCCCGCGCCCGCCGAGCCCGCGCCCGCCCGCACCGAACCACAGGGCTTCGGCAGCGTGCCGCCGCTCGCGCTCGTCTCGCACCACTCTGAGCAACTACTCAACGACGCCGGCGAGGGCACGCTGGATGTGCGGTTGCAGAAGTTGGTGAGTTCGAAGCAAGCCTTGGAGTCGGAGGTGCGCAAACTGAAACTTAGTCTCAACGAGGAGCGTGCCGCGCGACAAAATGGAGTCGCATCGCTACATGAGCGTGAACACGACAGCGAACTGGAATCTTTACGCAAATCTGTGGCGGAGGCGAAGGGGCGAGCTGCGCGAGCGGAGGCTGAAGCCGCGCTACAAGCGGCCGCCGTGGCGCGTCTCGAGGCGCAGGTGGCCCGCCTGCGAGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGACGTCTGCAGCGCGAGGCTAGAGAAGCACTGAATCGAGTTGAAGAATTGGAGACAGAGAACAGTCATCTAACGAAACGCCTTGATAAACTCAAGAACGCTAAATCTGCGCTCCTGAAAGAACTGTGA
Protein Sequence: MGKKSEHTTPDNSDEESGEAFTDGDFGDSDEETVLERSDVSKSGQLPVNETVNTSVRTVNNSEVDEEAICVTNGNGDGEEDNENFENGHGSQSDELDNYVDVVVTDARDDSYSEINPSIIGILGDQHSHNSKCLVSARATSVDNTCVECSARQPRLCGMLTVELLIRAAARLLLLYAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAFDMYAETVGRRGGRLAALSPSIHSPRRSSEDSADDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEHAQLQREHKEKCSAHERLKREHAALEREVACARDAVRARDAAAAAAGFAFVDAAAEPAPAEPAPARTEPQGFGSVPPLALVSHHSEQLLNDAGEGTLDVRLQKLVSSKQALESEVRKLKLSLNEERAARQNGVASLHEREHDSELESLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01156469;
90% Identity: -
80% Identity: -