Pful006427.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963082885.1
- Location
- OY720174.1:19578473-19592156[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.19 7e+03 -3.0 0.4 253 281 75 104 50 108 0.52 2 3 3.9e-79 1.5e-74 252.1 26.0 1 297 122 408 122 410 0.88 3 3 0.58 2.2e+04 -4.6 15.7 1 49 407 454 407 482 0.72
Sequence Information
- Coding Sequence
- ATGGGGCAGCGATCTGAAGTGGCCACACCTCACAATAGTGACGACGAAAGTGGAGATGCTTTTACAGATGGCGATTTCGGCGATTCCGATGATGAGATGTTTTTTGAAGGTAACGATGACGTAAAATCATCTAATATTCCTGTAAATGAGGCCAAGAACGAGGATATTCAAAAAATGAATAGAGCAACCAATGGTGAATCCCATGATCCAGAGGAACAACCCAAACTAAACGGTCGACAGATTAGTGAGACTCACTCGACTGATGCAGAGAACCAAAGTTTAGTCTTATCGGATTTACGTAGAGATTCTCACGGCGAGCTAAATCATTCAATAGTTGGAATTCTTGGCGATCAGCATAATCATGCGGAGCAGAGATTGGCAGCGCGTCGAGCGGCCAGAGCAGAGGCGCGTGAAATACGCATGCGCGAATTGGAGCGACAGCAGCGAGAACAAGAGGACCATGCCGACAAAGCATACGATATGTATGCAGACACAGTGGGTCGGCGGGACCGCACACGACTGGTGGCGCTCAGTCCGGCGGCCACCGTGCATTCACCGCGCCGAAGTTCTGAAGACTCCGTCGATGAATCCTTCAGCATCAAAGACCTTAGGCACGAGTTAAAAGAAGTGGAAGAAAAGTTCCGCAAGGCGATGATACTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAAGAGTACGCGCAGCTAcagcGCGAACACAAAGAGAAATGTTCATCATTTGAGCGTCTAAAACGCGAGCATGAATCTGTAACTCGCGAGCTATGCGCCGCTCGGGACGCGGTACGGGCGCGCGATACCGCGGTGATGGCGGCGGGCTTTGCGTTTGTAGAAGCAGCTGCACTTGATAACACTACGAATGGTGTAGGTGATGCGGTGGGTTCGGTACCGCCGCTGGCACTAGTCTCGCACTCCGCTGAACAGTTGCTCAATGATGCTGGAGAAGGGACACTTgACGTACGGTTACAAAATCTCCTGAGTTCGAAACAAAACCTTGAATCCGAAGTTCGAAAGCTAAAATTGCAATTGAACGAGGAACGAGCCGCTAGACAAAATGGAGTCGCTAACCACCATGATCAGGAGTATGAAAAcgaatTGGAAGCAGTTCGCAAGACGGCGTCAGACGCGAAGGGTCGTGCGGCGCGCGCGGAGGCGGAGGCGGCGCTGCACGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCAGGAAGCTGCAGCGGGAGGCACGTGAAGCGTTAAACCGGGTGGAAGAACTGGAGACTGAGAACAGCCACCTGACGAAGCGACTGGACAAACTGAAGAATGCTAAGTCCGCACTACTCAAGGACCTGTGA
- Protein Sequence
- MGQRSEVATPHNSDDESGDAFTDGDFGDSDDEMFFEGNDDVKSSNIPVNEAKNEDIQKMNRATNGESHDPEEQPKLNGRQISETHSTDAENQSLVLSDLRRDSHGELNHSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYADTVGRRDRTRLVALSPAATVHSPRRSSEDSVDESFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVTRELCAARDAVRARDTAVMAAGFAFVEAAALDNTTNGVGDAVGSVPPLALVSHSAEQLLNDAGEGTLDVRLQNLLSSKQNLESEVRKLKLQLNEERAARQNGVANHHDQEYENELEAVRKTASDAKGRAARAEAEAALHAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- -
- 80% Identity
- -