Basic Information

Insect: Papilio xuthus
Gene Symbol: ct
Assembly: GCA_000836235.1
Location: NW:595289-740006[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.5e-27 2.5e-23 81.6 0.0 3 70 345 413 343 419 0.94

2 3 4.8e-32 3.4e-28 97.1 0.0 4 77 745 819 743 821 0.96

3 3 5.8e-31 4.1e-27 93.7 0.0 3 75 947 1020 945 1024 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.5e-27	2.5e-23	81.6	3	70	345	413	343	419	0.94
2	3	4.8e-32	3.4e-28	97.1	4	77	745	819	743	821	0.96
3	3	5.8e-31	4.1e-27	93.7	3	75	947	1020	945	1024	0.95

Sequence Information

Coding Sequence: ATGCACCCGACGGGCGCGGCCAGCCTGCCCGCCGCACCGGAGGCGGAGGTGCAAGCTATGCACTCCATGGACTGGCTCTTCAAGAAAGAAAGGATATACCTCCTAGCACAGTTCTGGCAACAGAGAGCTACTCTGGCGGAGAAAGAAGTAACAACTCTCAAGGAGCAGCTCGCTACAAGCAGCCCTGTACCTCTCCAAGCGACAGTGCCGCCGAAAACAAATGGCTCGCATATAGAATCCACAAGAGATCAGGCCACAGAAACCAGAATACAAGAGAGACTGAGCCCTGATATcaaagaagagaagagaaggtCGCCTGAAATTGAtgaagatatagaacataagaTAGAAATGGCAGCAACGGGACGAAGCAATAGTAATTCTACGAGAAGCAGTCCGGTGATCAACCAGGGGACCAATCTGGAGATTGAACTCGCGGCTAAGGAGAAAGAGatCGCGCAGCTTGTAGAGGACGTTCGTCGACTCCAAGCATCATTGTCAGCGCTGCAAGAAGCGCACTCGCAGCAGCTACGACGACTAGAGGAGCGGTTGGATGAGAAGAAACAACACATCGCCCGCCTCGAAGCCCGCCTCGACACGCAGCGTGACTACGATGATATCAAACGAGAAATCAGTATGCTGCGGTCTTTAGACCTAAGTTCAGACCGGCCGGTGGACCGCAAGCCAGAGTTGCGTTCCCCCGCGGTGCCGCAAGAAGACCGCGCGTCCGCGGAACGCGAACGCAGCGCAGAACGCAGAGACACCGGTGGCGACGAGTGGCCGAGCACGCCGCCCCCGCTAAACAACAACACGACGCATCACAACAACAACGGCCCGCTGCCGCTCCCACTGCCGCCGCCGAGCCCCTTCCGCTTCGAGGAACACCGGCCGTACCGCTTCGCAGAAGACATGGGTCCGTTGCCGCCTGGTGCACTTGTTGGCCGCCTTGGGGACTCGCTCATCCCGAAGGGAGACCCGATGGAGGCGCGTCTGCAAGAGATGCTGCGATACAACATGGACAAATACGCGAACACTAACCTGGACACGCTGCACATAAGCCGGCGAGTGCGGGAGCTGCTCTCAGTGCACAACATCGGGCAGCGATTGTTCGCGAAGTACGTGCTGGGCCTATCGCAGGGCACCGTCTCAGAGTTGCTCTCGAAGCCGAAACCCTGGGACAAGCTGACGGAAAAAGGCCGGGACTCATACAGGAAGATGCACGCGTGGGCGTGTGATGAGGCGGCCATCATGCTACTCAAGTCCCTCATTCCCAAAAAAGTGGGAACAAAAGATGGCACGGTGGGTCCGACTTTCGGGAGAAGCGATGGCGAAGGGGATGATAGACTGGCGCACATCCTCACCGAGGCCTCCCACATGATGAAGACTCCAGGACCGGTTACTAACGATGACTCAAGGAGTAACGAAGACTCTTGCTCGCCCCGAACACAATGCCCATCACCATTCTCCAACAAGgaTTCAAGTCAAAATAGAAGATTGAAGAAGTACGAGAATGACGACATCCCTCAGGAGAAGGTGGTCCGGATCTATCAGGAAGAGCTGGCCAAGATTATGACGCGGCGAGTCGAGGACATGCGACACAGTCGCGAGGGCTTCCCTGGCATGTATCCTCCATTTTTCAGCGGCGGTATGCCCCCGCACATGGAGCGCCCGCCCGAAGATATCCGCATGGCGCTCGAGGCCTATCACCGTGAGCTCGCTAAGATGCAGCCAGGCGCCAACCTGCCCAACCTACCCAACCTGCACGGGCTACCCGGTGTTCCTGGCGTGCCTCCCTTCCCTAACCTGCTCGCGCTGCAGCAACAGGCCATGCAGGCCAATCCGCACATGAACGGCGCCGGCGCAGTGCAGGACCTCTCGCTTCCCAAAGACAAAAACGCCAAAATGAACGGAATGACTGATAGCGATAAGGACAAACCCATGGATGCGGAGGAAGCGATACGGCACGCGGGTAGCGCCTTCTCCCTCGTGCGGCCTAAGCTGGAGCCCGGCCAGTCCACCGGCTCCTCGGCCTCCAGTCCCCTCGGCAACGCCATTCTGCCGCCAAACGAGGACTTCGGTGGCTCCGCAGCCGCCAGCCCCTTGCAAAGGATGGCGTCGATCACGAACAGCCTGATCTCTCAGCCGTCTAACCCCCCGCACCACCCGCCGCCCCAGAGATCGATGAAGGCGGTACTCCCTCCGATTACGCAGCAACAGTTCgacctttttaataatttaaatacagaaGAGATCGTGAGACGAGTGAAGGAAGCCTTAAGTCAGTACTCCATAAGTCAGAGGCTCTTTGGCGAATCGGTGCTCGGTCTATCTCAAGGGTCTGTGAGCGATTTGTTAGCGAGGCCGAAGCCGTGGCACATGCTTACGCAAAAGGGTAGGGAGCCTTTCATCCGCATGAAGATGTTCCTGGAAGACGACAACGCGGTGCACAAGCTGGTCGCCTCGCAGTACAAGATCGCACCGGAGAAGCTGATGCGGACAGGCAACTACAGCGGAGCACCTCCATGTCCGCCAAACATGAACAAACCGATGCCGCCAACACAGAAGATGATCTCCGACGCGACATCCCTGCTGAGCAAGATGCAGCAGGAGCAGCTGCTGAGCTCGGGCCATCTGGGCCACCTGGGCCAGCCCGCCCCACTGCTGCTCACCCCGCCCGGCTTCCCCCCGCACCACGCCGTCACATTGCCCCCGCAGCACCACGACAATAACAAGGAACGAAAACCTCCTCCCCCTCCGCAGCCTTTACATCAACCTCCAGTAATGCGAGGGATGCACCAACATATCTCCCCGAGCGTATACGAAATGGCCGCCTTAACGCAAGACCTGGACACGCAAACGATTACGACCAAAATAAAAGAGGCACTTCTAGCGAACAACATTGGACAGAAAATATTCGGAGAAGCCGTTCTCGGATTATCTCAAGGATCAGTGAGCGAGCTTCTGTCGAAACCGAAACCCTGGCACATGCTTAGCATCAAGGGGCGCGAGCCTTTCATAAGAATGCAGCTTTGGTTGAGTGACGCGCACAACATTGATCGCCTTCAAGCTCTCAAGAACGAGAGACGCGAAGCCAACAAGAGACGAAGGTCGAGTGGACCAGGCCAGGATAACTCATCTGATACCTCGTCCAATGACACGTCAGAATTCTACCATTCGAGTTCCCCGGGTCCAACTTCAGGGGTTCCGTCGGCCAAGAAACAAAGAGTTTTATTCTCCGAAGAACAAAAGGAAGCTTTAAGACTTGCATTCGCTTTAGATCCATATCCCAATATGCCTACGATAGAGTTCTTGGCGGCCGAGCTTGGGCTTTCGACGAGAACGATAACTAATTGGTTTCATAATCATCGAATGCGGTTAAAGCAACAAGCGCCACACGGACTACCGGCTGAGCCTCCTGCGAGGGACCAGTCCTCAGCGCCCTTTGATCCTGTCCAATTCCGATTACTCCTCAACCAGAGAATACTCGAACTCCAAAAGGAACGAATGGGTCTCGCAGGAGTGCCGCTCCCATACCCTCCGTACTTTGCAGCGAATTCAAATTTTGCCGCATTGATCGGTAGAGGTCTATTGCCACCCGAGGAGCAGACGAAGGATACCTCTAGCGGTCTCGATCTCTCTATGCCCCTAAAAAGGGAACCGGATGGAGATGATTTCGAGGACGACGACGTGGAAAGCAACCTCGGGTCCGAAGACTCGCTGGACGACGACTCGAAGACTGAGCCCAAAGCGGCATCGACGCCCGCAGGCAGATCGAATAGAAGAAAGCCAGCGGCGCCTCAGTGGGTGAACCCGGACTGGCAGGACGAGAAGCCACGGAACCCCGACGAAGTTATCATAAACGGTGTTTGTGTAATGAGAAGCGATGACTTCAGGCGGGAAGCGGAGGAAACCGTGAGGGTGGAGCCCTCGCCGGTGCCGCGTGAGCCCTCCCCGTCCCCTTCGTCGGTCCAGCCCTCCCCGCATACACACTCCCCGGACGTCCTCCCGGAAGACAAGATTAAAACGGAAAATGAGGACGATCGGTGGGAGTATTAG
Protein Sequence: MHPTGAASLPAAPEAEVQAMHSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLATSSPVPLQATVPPKTNGSHIESTRDQATETRIQERLSPDIKEEKRRSPEIDEDIEHKIEMAATGRSNSNSTRSSPVINQGTNLEIELAAKEKEIAQLVEDVRRLQASLSALQEAHSQQLRRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRSLDLSSDRPVDRKPELRSPAVPQEDRASAERERSAERRDTGGDEWPSTPPPLNNNTTHHNNNGPLPLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTVGPTFGRSDGEGDDRLAHILTEASHMMKTPGPVTNDDSRSNEDSCSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHSREGFPGMYPPFFSGGMPPHMERPPEDIRMALEAYHRELAKMQPGANLPNLPNLHGLPGVPGVPPFPNLLALQQQAMQANPHMNGAGAVQDLSLPKDKNAKMNGMTDSDKDKPMDAEEAIRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPNEDFGGSAAASPLQRMASITNSLISQPSNPPHHPPPQRSMKAVLPPITQQQFDLFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLSSGHLGHLGQPAPLLLTPPGFPPHHAVTLPPQHHDNNKERKPPPPPQPLHQPPVMRGMHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRILELQKERMGLAGVPLPYPPYFAANSNFAALIGRGLLPPEEQTKDTSSGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDDDSKTEPKAASTPAGRSNRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPREPSPSPSSVQPSPHTHSPDVLPEDKIKTENEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01338275;
90% Identity: iTF_01147214;
80% Identity: iTF_01149490;