Prud002564.1
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- dmd-4
- Assembly
- GCA_956483635.1
- Location
- OY101447.1:16272224-16282262[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-24 2.1e-20 73.8 11.8 1 47 47 93 47 93 0.98 2 2 1.7 1.8e+04 -2.8 0.7 24 31 333 340 331 344 0.69
Sequence Information
- Coding Sequence
- ATGTCCTCTTCAGTGAACACAACAACTGCTGGCCAAGAATTATCCTCTACAAAAACTTCAGTTGGCAAAAAATCGCGCAAATCATTAAAGTCCCTGGTGGCGGCGGACGGCACATCAACTAAATCTTCTTTAACAAATCGTGTTCCGAAATGTGCTCGTTGTCGTAATCATGGCTGGATATCGGAGTTACGGGGCCATAAAAAACACTGCACCTATAAGAATTGTCGCTGCGCCAAGTGTGTTTTGATCTTCGAGAGACAAAGAATAATGGCGGCTCAGGTTGCCCTCAAGCGTCAACAGGCTGTAGAAGATGCCATTGCACTACGTTTAGTGGCTACTAAGACTGGTCAACAAATGGACAGTCTGCCTCCAGGGAATATATTTGATTTAGCTGAAAATCTGCAGGACACAAAAAGTGCCAACGTCTTACAACAAGAAACTGTTGAAGATTTAAGTTTGCCTACAAAACAAACAGAGCAGTTACAAACAACTTTACTTCATTCGAAAATTAATTTAGAAGACGATGGCATTAGCAACTCGAAAAAAGCAGCTTTGGCCTCCAATTCCAGCACATCATCGTTGTCTTCATCCAACAACAGCTGCTTGTCCGATGCTAGAGTATCTCAGAATGCCATCGACATGTTGGCTCAATTATTTCCCAAAAGAAAACGTTCAGTTTTGGAACTGGTCTTAAGGAGATGTGATTCAGATTTGGTTAAAGccatagaaaatatttcatctGGTTCGTGTAAAGATCATCAGGGTGAAATTGAAAATCAACTTGAGCAGGCgggtataaatgttattaaaagcGCTTTTAAGCCGGTTCATAGTTCAGGGAATGTGCACCCGAAACCTTTAACCCTGGGCAGCACTTTATGTTCCACGACTGCAGCTTATCCCAAATGGTTTGTGCCACTCTCATTTCCCATCACATTTCAAGGACACTTAGCACCCGCTTTACCGCCATCATCGCTACCGCCACTTACTTCACCTTGCACTCTACCGAATTGTGCATGTTTAGAAAGTTATCAGTttaattgttaa
- Protein Sequence
- MSSSVNTTTAGQELSSTKTSVGKKSRKSLKSLVAADGTSTKSSLTNRVPKCARCRNHGWISELRGHKKHCTYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQQMDSLPPGNIFDLAENLQDTKSANVLQQETVEDLSLPTKQTEQLQTTLLHSKINLEDDGISNSKKAALASNSSTSSLSSSNNSCLSDARVSQNAIDMLAQLFPKRKRSVLELVLRRCDSDLVKAIENISSGSCKDHQGEIENQLEQAGINVIKSAFKPVHSSGNVHPKPLTLGSTLCSTTAAYPKWFVPLSFPITFQGHLAPALPPSSLPPLTSPCTLPNCACLESYQFNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00899602; iTF_00760117; iTF_00900608;
- 90% Identity
- -
- 80% Identity
- -