Lvul016954.1
Basic Information
- Insect
- Linnaemya vulpina
- Gene Symbol
- dmd-4
- Assembly
- GCA_963675445.1
- Location
- OY776277.1:109454267-109458546[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.1e-25 8.9e-21 74.8 9.8 1 47 46 92 46 92 0.98 2 3 1.1 1.2e+04 -2.5 0.1 7 13 256 262 255 267 0.73 3 3 0.68 7.4e+03 -1.8 0.5 23 31 339 347 337 351 0.74
Sequence Information
- Coding Sequence
- ATGTCTTCTGTAGTGAACAACATATCTGCCGGCCAAGAATTATCCTCGACAAAAACATCAATTGGAAAAAAATCGCGCAAATCGTTAAAGTCCTTAGCGGCGGATGGTGCACCAACCATATCTCCGCTAACAAGTCGTGTTCCGAAATGTGCTCGATGTCGTAATCATGGCTGGATATCCGAGTTGCGGGGTCATAAAAAACtgtgtacatataaaaattgtcgCTGTGCTAAATGTGTTTTGATCTTCGAGAGGCAAAGAATTATGGCGGCTCAGGTTGCCCTTAAGCGTCAACAGGCTGTGGAAGATGCCATAGCATTGCGCTTGGTCGCCACCAAAACTGGCCAGCAAATGGACAGTCTGCCTCCAGGGAATATATTCGATTTGGCTGAAAATCTGCAGGAGGACACAAAAACTACCAGCGAATTGCAACAAGAAACTGTTGAGGATTTAAGTTTGCCCACAAAACAAGCAAATCCTTGGCAAACAACTTCACTCCACTCCAAAACAAACTCCGAGAGCGACCACCCCATTAACAACACGCCAAAAGCAGCTCTGCTGGTCTGCCATACCAGcacatcatcagcatcatcatcatcatcatcatcatcatcagccaACGTCTGTTTGCCGGATGCTAAAATATCCCAGAATGCCATCGATATGTTGGCACAACTGTTTCCCAAGAGGAAACGTTCAGTTTTGGAATTGGTGCTCAAGAGATGCGATTCCGATTTGGTTAAGGCCATCGAAAATATTTCCTCTTCTTGCAGAGAACATCAGGGCGAAATTGAAAGTCGACTTGAACAGGCGGGTGTGGATGTTATTAAAAGCGCTTTTAAGCCGGTGCACAGTACAGGAAATGTGCACCCCAGCCCCTTAACCCTGGCCAGCACTTTATGTTCCACAACGACATCTTATCCCAAATGGTTTGTGCCACTCACCTTTCCCGTTACATTTCAGGGCCATTTAGCACCAGCTCTGCCGCCATCAGCACTGCCGCCGCTTGCTTCACGTTGCACTCTGCCAAACTGTGCATGTCTGGATGGttatcaatttaattgttaa
- Protein Sequence
- MSSVVNNISAGQELSSTKTSIGKKSRKSLKSLAADGAPTISPLTSRVPKCARCRNHGWISELRGHKKLCTYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQQMDSLPPGNIFDLAENLQEDTKTTSELQQETVEDLSLPTKQANPWQTTSLHSKTNSESDHPINNTPKAALLVCHTSTSSASSSSSSSSSANVCLPDAKISQNAIDMLAQLFPKRKRSVLELVLKRCDSDLVKAIENISSSCREHQGEIESRLEQAGVDVIKSAFKPVHSTGNVHPSPLTLASTLCSTTTSYPKWFVPLTFPVTFQGHLAPALPPSALPPLASRCTLPNCACLDGYQFNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01138035;
- 90% Identity
- -
- 80% Identity
- -