Pcor001226.2
Basic Information
- Insect
- Pandemis corylana
- Gene Symbol
- pnr
- Assembly
- GCA_949127965.1
- Location
- OX421850.1:19771339-19783943[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 3e-14 52.9 4.1 1 35 111 144 111 145 0.97 2 2 1.1e-17 2.8e-14 53.1 6.3 1 34 179 211 179 213 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGGAACGGCGGTGGTTACGCGGGCAGCGGCGACTGCGCCGAGGGCTATGGACTAGGCTACGTGGCGGGCGGTGGCCGGCTGCAGCAGTACGCACACTTCGCGCCCCACCAGAACGTCTGGCACCACCACCACACCCCACACCACGATTCGTATGGTAGTGGTGGCGTGGGAAGCGTGGGCGGTGTAGGCGGCGTGGGCGGAATGGCTGGCGGGCTGTATGGCCAGAACATGGTGATGGGCTCGTGGTGCCCGCCCTACGACGCGCTGCAACGCCCGCCTGCTTACGATGGCGGACTGGAAGCGTATGAAGAGGGCCGCGAGTGCGTTAACTGCGGCGCCAATAACACTCCGCTGTGGCGGAGGGACTCGACCGGCCACTACCTCTGCAACGCCTGTGGGCTGTACCACAAGATCAACGGCGTCAACCGGCCGCTCGTGAAGCCCAGCAAGCGGCTGAGATGGATGAGTGTGGAGGGCATGGCCAGGGGCATGAAGAAGTCAGCGGCGCGGCGGCACGGCCAGTGCTGCACCAATTGCGGCTCTCGCAACACAACGCTGTGGCGGCGCAACAACGAGGGCGAGCCAGTCTGCAACGCTTGCGGCCTCTACTACAAGCTGCACGGAATCAACCGGCCACTAGCAATGAGAAAAGATGGCATTCAAACGAGAAAACGGAAACCGAAAAAATCTGCTAATGGTGCTAAATCCGCACAAGAAGCTTCAAAGAAAGATGGGCAATGTTCTCCTGGCATAGATGAAAGTAAGCCGAGCGTATCCGAAGTGCCTCTGCCTTTAACAGCGTCGATGTCTAGTCACAGTTCTGTTTCGAAGCCGCGCACGGAAGCTCACGTGTCAGAGACGTCGCCTCACGCGCACGCACACGGTCCAAGCCACGCACACACGCAATACCCGCTAGGACTGCCGACCACACCGTTCCTGTCCAACCCCTCGCTCTTCAACATAAAGAGTGAACCGAATGCACCTAACGGCTATGACGGATATGCCCACACTGGAGGCCATTATCACTCGCAGCAACATTATTTGCATGCACTACagTATGGCCTAGGCAGTGGTGAAGAAGAAGAGGGCAGTGGGTTCCTACACCAACGCAACGTGACCGCGCACGCCAAACTCATGGCTTCTACGTAG
- Protein Sequence
- MFGGNGGGYAGSGDCAEGYGLGYVAGGGRLQQYAHFAPHQNVWHHHHTPHHDSYGSGGVGSVGGVGGVGGMAGGLYGQNMVMGSWCPPYDALQRPPAYDGGLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLRWMSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGAKSAQEASKKDGQCSPGIDESKPSVSEVPLPLTASMSSHSSVSKPRTEAHVSETSPHAHAHGPSHAHTQYPLGLPTTPFLSNPSLFNIKSEPNAPNGYDGYAHTGGHYHSQQHYLHALQYGLGSGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00155909; iTF_00021882; iTF_01463834; iTF_00326045; iTF_01136401; iTF_01073248; iTF_00010766; iTF_00342815; iTF_01246495; iTF_00023378; iTF_00681333; iTF_00463038; iTF_00773461; iTF_01341885; iTF_00659966; iTF_00660944; iTF_00656809; iTF_00411058; iTF_00150147; iTF_00412179; iTF_00872021; iTF_00409940; iTF_01134445; iTF_00290333; iTF_00659135;
- 90% Identity
- iTF_01136401;
- 80% Identity
- -