Cpom001360.2
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- pnr
- Assembly
- GCA_033807575.1
- Location
- CM066344.1:24519898-24535326[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 4.7e-14 52.9 4.1 1 35 104 137 104 138 0.97 2 2 1.2e-17 4.3e-14 53.1 6.3 1 34 177 209 177 211 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGAAGCAACGCAGGAGGATATACGGGCAGCGGCGACTGCGCCGAGGGCTACGGTCTGGGCTACGTGGCGGGTGGAGGCCGCCTGCAGCAGTACGCCCATTTCCCGCATCAGAACGTCTGGCATCACCATCACACTCCGCACCACGACACTTACGGCAGTAGCAGCGTTGGTGGCGTCGGCTCCATGGCTGGCGGCCTGTATCCCCAGAACATGGTGATGGGTTCCTGGTGCGCCCCATACGACGCACTGCAGCGCCCTCCTGCATACGATGGCGGTCTGGAATCTTACGAAGAGGGTCGTGAGTGTGTTAACTGCGGCGCCAATAACACCCCGCTGTGGCGCAGGGACTCCACGGGGCACTACCTGTGCAACGCATGCGGCCTCTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTCAAGCCCAGCAAGCGGCTGGACGGCTCCGTGCAGAGATGGATGAGTGTGGAGGGCATGACCAGGGGCATGAAGAAGTCGGCTGCGCGGCGCCATGGGCAGTGCTGCACCAACTGCGGGTCGCGCAACACCACGCTGTGGCGGCGCAACAACGAGGGCGAGCCCGTCTGCAACGCCTGCGGACTCTACTACAAGCTGCATGGAATTAATCGGCCGTTAGCAATGCGGAAGGACGGGATTCAAACAAGGAAAAGAAAACCGAAAAAGTCTGCTAATGCAGCTAAATCTGCACAAGAAAGTTCCAAGAAAGAAGGACAATGTTCACCCGGTGTTGatgAAAGCAAGCCAAGCGTTTCAGAAGTGCCATTACCTTTAACGGCATCCATGTCTAGTCACGGGTCCTTGTCGAAGGCCCGCGCAGAGGCACATTCGTCGGAAACGTCCCCTCACACGCACTCCCACAGCCAAGGGCACGGGCACACGCAGTACCCCCTGGGCCTACCCGCGGCTCCTGGCTTCCTCTCTAATCCTTCGATCTTCAACATTAAGAGTGAGCCAAATGCCCCCAACGGCTACGACGGATATGCGACTCACTCTGGCAGCCATTACCACTCGCAACAGCACTACTTACACGCATTACAGTACGGCCTCGGTAACAGCGAAGAAGAGGAAGGTAGCGGGTTTCTCCACCAGCGCAACGTGACCGCACACGCCAAGCTCATGGCCTCCACGTAG
- Protein Sequence
- MFGSNAGGYTGSGDCAEGYGLGYVAGGGRLQQYAHFPHQNVWHHHHTPHHDTYGSSSVGGVGSMAGGLYPQNMVMGSWCAPYDALQRPPAYDGGLESYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLDGSVQRWMSVEGMTRGMKKSAARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANAAKSAQESSKKEGQCSPGVDESKPSVSEVPLPLTASMSSHGSLSKARAEAHSSETSPHTHSHSQGHGHTQYPLGLPAAPGFLSNPSIFNIKSEPNAPNGYDGYATHSGSHYHSQQHYLHALQYGLGNSEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01135417;
- 90% Identity
- iTF_01134445;
- 80% Identity
- -