Atur002021.2
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- pnr
- Assembly
- GCA_905147355.1
- Location
- LR990280.1:29106466-29125347[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 6.4e-14 52.9 4.1 1 35 107 140 107 141 0.97 2 2 9.9e-18 5.8e-14 53.0 6.3 1 34 180 212 180 214 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCAACAGCGGCGGGTAcgcaggcggcggcggcggcgactgCGCCGAGGGCTACGGGCTGGGCTACGTGGCCGGCGGCGGCCGCCTGCAGCAGTACGCGCACTTCGCTCCCCACCAGAACGTCTGGCACCACCACCACACGCCCCACCACGACACTTACGGTGGGAGCGGCGTGGGTGGCGTGGGCTCCATGGCCGGCGGCCTGTATGGGCAGAACATGGTGATGGGCTCATGGTGCGCGCCCTACGACGCGCTGCAGCGCCCGCCTGCATACGATGGCGGTCTGGAATCGTACGAAGAAGGACGCGAGTGCGTAAACTGCGGCGCCAATAACACCCCGCTGTGGCGCAGGGACTCCACGGGGCACTACCTCTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTGAAGCCCAGCAAGCGGCTGGACGGCTCCGTGCAGAGATGGATGAGTGTGGAGGGCATGGCCAGGGGCATGAAGAAGTCGGCCGCTCGGCGCCACGGGCAATGTTGCACCAACTGCGGGTCGCGCAACACCACGCTGTGGCGGCGCAACAACGAGGGCGAGCCTGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCATGGAATCAATCGACCACTAGCGATGAGGAAGGACGGCATTCAAACTAGAAAACGGAAACCGAAAAAGTCTGCAAATGGTGCTAAATCAACACAAGACAGTTCTAAGAAAGACGGCCAATGTTCTCCCGGTGTAGATGAAAGCAAACCGAGCGTATCGGAAGTCCCGCTGCCTTTAACGGCGTCGATGTCTAGTCATGGGTCTGTGTCGAAGGGCCGCACAGAGGCGCTCGCGTCGGAGGCGTCACCGCACGCGCACTCTCACAGTCAAGGACACGGGCATGCGCAATACCCCCTCGGCCTGCCCTCTACTCCTGGGTTCCTCTCGAACCCGTCGCTCTTCAACATCAAGAGCGAGCCCAACGCACCCAACGGTTACGACGCGTATGCCGCTCATACTGGGGGACATTATCACTCGCAACAACATTACTTGCACGCACTGCAGTATGGCCTCGGCAACGGCGAGGAAGAAGAAGGCAGCGGGTTCCTGCACCAGAGGAACGTGACCGCGCATGCCAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MFGGNSGGYAGGGGGDCAEGYGLGYVAGGGRLQQYAHFAPHQNVWHHHHTPHHDTYGGSGVGGVGSMAGGLYGQNMVMGSWCAPYDALQRPPAYDGGLESYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLDGSVQRWMSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGAKSTQDSSKKDGQCSPGVDESKPSVSEVPLPLTASMSSHGSVSKGRTEALASEASPHAHSHSQGHGHAQYPLGLPSTPGFLSNPSLFNIKSEPNAPNGYDAYAAHTGGHYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01135417;
- 90% Identity
- iTF_01134445;
- 80% Identity
- -