Basic Information

Insect: Pandemis corylana
Gene Symbol: zfpm1_1
Assembly: GCA_949127965.1
Location: OX421859.1:2409246-2422186[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9 1.3e+02 4.0 0.3 2 23 6 27 5 27 0.96

2 14 0.12 7.9 7.8 0.1 1 23 999 1022 999 1022 0.92

3 14 6.6 4.3e+02 2.3 0.4 1 23 1096 1118 1096 1118 0.92

4 14 2.1e-05 0.0014 19.6 1.7 2 23 1121 1142 1120 1142 0.97

5 14 0.00022 0.014 16.4 4.0 1 23 1148 1170 1148 1170 0.98

6 14 0.0035 0.23 12.6 3.6 1 23 1176 1198 1176 1199 0.96

7 14 0.17 11 7.3 1.4 5 23 1212 1230 1211 1230 0.96

8 14 0.00077 0.05 14.7 1.2 3 23 1237 1258 1236 1258 0.97

9 14 0.017 1.1 10.5 0.1 2 23 1275 1295 1274 1295 0.97

10 14 0.0048 0.31 12.2 0.6 3 20 1303 1320 1301 1323 0.85

11 14 0.00052 0.034 15.3 0.3 1 23 1331 1353 1331 1353 0.98

12 14 0.0057 0.37 12.0 7.1 1 23 1359 1381 1359 1381 0.98

13 14 8.3e-06 0.00053 20.9 1.3 1 23 1387 1411 1387 1411 0.98

14 14 0.0029 0.19 12.9 4.9 1 23 1417 1439 1417 1440 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9	1.3e+02	4.0	0.3	2	23	6	27	5	27	0.96
2	14	0.12	7.9	7.8	0.1	1	23	999	1022	999	1022	0.92
3	14	6.6	4.3e+02	2.3	0.4	1	23	1096	1118	1096	1118	0.92
4	14	2.1e-05	0.0014	19.6	1.7	2	23	1121	1142	1120	1142	0.97
5	14	0.00022	0.014	16.4	4.0	1	23	1148	1170	1148	1170	0.98
6	14	0.0035	0.23	12.6	3.6	1	23	1176	1198	1176	1199	0.96
7	14	0.17	11	7.3	1.4	5	23	1212	1230	1211	1230	0.96
8	14	0.00077	0.05	14.7	1.2	3	23	1237	1258	1236	1258	0.97
9	14	0.017	1.1	10.5	0.1	2	23	1275	1295	1274	1295	0.97
10	14	0.0048	0.31	12.2	0.6	3	20	1303	1320	1301	1323	0.85
11	14	0.00052	0.034	15.3	0.3	1	23	1331	1353	1331	1353	0.98
12	14	0.0057	0.37	12.0	7.1	1	23	1359	1381	1359	1381	0.98
13	14	8.3e-06	0.00053	20.9	1.3	1	23	1387	1411	1387	1411	0.98
14	14	0.0029	0.19	12.9	4.9	1	23	1417	1439	1417	1440	0.95

Sequence Information

Coding Sequence: ATGGAACAGCTCGTGCAGTGCCCTGTGTGCACGCTCTTCCTTCACAATGGAATGTCCCTGGAGTCTCATCTCGACACCCACCCCAAGGACCAGGTCATCAAAGCTTTGTGCACCTTATCAGCTAACAATGTGGGCTTTGGAAGCAGGACTTCCACACCAATGCACTCGGAGCGCTCCTATAGGAGTAGGTCCAGAACACCTGCTGAGGACAGCCCTCGGTGGAGTGGCTCTCATCGCAGCATTGACAATGAGAGATACTGGCGCAGGACCCCGAGCAGGTCTTCAAAAACTCCTGTGTCTAGTATAACCAGGAATGCAACACCAACTGATGTGCGAATAGGGGATTTAAACTTTGAAAACAACTCTAACAATGCTTCTTCAAACCATTACCCAGGGTTACCTTTTTTGAAGACTGACAAGTCCAATCAACCATTCATCCAAAACTTACCAGTGCCAGAATTTGATCAGCAATATGTTTATTATCCTGATCAACAAGAGGACAAGGAAATAAAGTATTCTCGCAGCGCTGAGTATAGTGCCATAGACAACACAAACAATGTATTTACCTATAACATGCCACCCTTGGCCCCTGCGGTCAAGCTACAGACAGCCTTGTTACCAACTGGCTCTCGTAGAAACAGTGAATTGGTGAAGCTCCTGCCCAAACCCAATAATATATTAGTTAAAACCAATGTGGGAGGGGTGCAATACATTACACCTGGTGTTAAGCCAGTGCACCTAATGGTGCCAACGGCTCCTACATTTGTACAGAAGAATGTACAAAACAACATGATTGTGTCTGGTAGTATACCAACCAGTCAGATCCTAGAGCCGAAAACTGTAGCTTCTCCTTTAGCCACCAGCAACAGTCAATTCAATCAACTTAGTTCAGGTACCTATACGCCAGGCACCACTGTGGTGACCCAGAATTCTCAGATTATCTACCGTGAGATGGTGCACAATATTGATGGCAAGCCTTTCATCTCCAGCATGCCAGCAGTCCTCAGCAATCATGACAATGTCACTAATGTAGCTGCTACCAGCTCTATGTACCAGAATGTCATGGTTGTAGATCAGTTTGGAAATACATCATGCATGTACACAACACCTCAACCGATTTTGTCTAAGCCATGCAGTACACCAATGTACAGTGATGTTTCAATGAGCAATCTTGAGAAATCAATCCCAAATAGCATGGTGAATGAAGCAAGTAAAACTCTAATTATTGAAGTGGGTCCAATAGTGACACCTGCTCCAATGGAAGCCTGCACCACCACAAGCACATCGCAAGCATCTCAGACTGTTACTGAGACTTCAACTTCACCGTCAACTCCAGTACCTGAGAAGCCCTTGGAGAGAAATGAGAGCAGGAATGACACACCAGGGCCCAGCAAGGGGCTCAAGATCCTAAGCAACATTAAGGTTGAAGTCCCTGTGCAGCATCACAAAAATTTGCTCAACACAGTAGTAGATCTCACTGGGTCACATGAACCTGAGTATTCCGACAGGTCTGCCTCTCCTGAAAGGATCCTTCCCGATTTTGAAGACAACAATCACAGCTTGTCTAGGGATTGCATGCAGCCTTCTGCAACTAGTAATGATAGTATAGTATCAAATACATTCTCTGTGATAAAAAATGTTGGGAACCCTCCCTCCTACAAGGACTCGGTGTCAAAGTCTTGTGTAGTagataataaaattgaaaatgaattttCGGACAGTTGCCCCATGCCGGACCTCATTTGCAAGGAGAAGCCCTCTATTTCGCCGTGCAGTGAGCTCTCTGAGAATGGGGACAATTCAACTGACAGGATTTCTATATCTCCTAAGCCAGAGATTGCGCAACCGCCTATCGAAACTCTTATAGAAAATGCAAAGCCTGCACCCCAGAAACCTCACAGGAGCATACCCCTAAGACTGAACAATATCTTTGTCAAAAAGCATAAAAAGATTTTAGGCATTAAAAACTGCAAGACTTATTCAGTGAGTCCTTCTAGTAGTAAAGATTCGCAGGCCGGGCCGTCATCGCCCGTCAGACCGCCTGAAAATTTTACTAtgaataaaatacatagttGTGATGAAAACAAGGACAAAACAGAGCCTCTGCAAACTGTCACTGTTGAGGTTTTCAATGATAATGACACACATCACGAGTTTGATGCTGATACAGAAGAGCAATCAATGGATATTGAACCAGTAGCACATTCCAGCATCAGCCACTCCAGTCAGTATTCTGGGGTGACCACGGTCCAGGTTAAAGAGGAGATCAACACTAGCAACGAAGGCGGTTTTAGCAACGGCACTGGTGCATCAGACCGTGATCTGACGCCGTTGGAGTCGATGCGACCGATCAACGTCATAGCTTACGGGAATCTTGCGGCCGACGACTTTGACGACGAGTCAAACCACAAGGAACTGCTAGAGCTCGAAGCTGCCTCCAAAAACAACAAGTTCGTGAGCATGATGAATGAAAACTACTTTGGAGACAACATCTACGCTGACTACTTTACTCCGGACCGTGTGGAATCCTTCGACGCGGCGAGAGAATCTGTGGCTTTTCCTAAAGAGAGCCAGGAAAAAGGGCTGTACATTTGGGGGGAGTCTTCCCAGAAAGAGTCTGAGTTTGTGCTGCCTAATTTCATTCATGAGAGCTACAAGATAGCTGAGAGCAGCGGGGTCGAGTACGTGGATGTCGGTGAGAGGGCTGACGCGGAGCGGGACAGCAAAGCGGACGTGCTGAGCGAGGGAAGGAGCGAGAGCGAGGCGCCGTTGAACATATGCGCCGATGAGCGGATGCCGCCGCGTGGGGAACTCAGCGGTCAGGAGAGCAATGGCGACATGGAATCGCCGTGGAGTGGGATGTACACGGAGGTGACGCCAGCGGAGCCCTACGACCTGATCGCGCGGGAGAGCTGGGTCTCCGATGGCTCCGAGATTGATACCAGCGAGAAGAGGGATAACCTTGAAGAAGAAGAACTGCCCAAGCCCCGGCTCTACACTTGCGCAGTGTGCCGCGCGAAGTTCGCCTCGCTGAAGGAGATGCGCGCGCACAAGGCGCTGGCGCACGCCGCGCCGACCTGCTCCGGCGCGTCCTACAGCCGGCTGGTCACGGCCCGGAGCATCAAGAAGGAGGAGAAGACTGAGGATATTATACCAGGTGCAATCCTTCTACCTGACTCCAAGGAGTCAATAGCCAGCACTATGCTCCACGTGTACGATGCTATAGAGTCCAAGCCCACCATAGAGACCCTCATCAAGCAGGAGCCCAAGAGGAAACGGAAGGACTTCGTCTGCCCCACCTGCAAGGTGGACCAGGGCACGGAGTCGGCATTCCATGCCCATCTGAAGCTGCACCCGCTGGAGTGTCTCACTTGTGGGAAGTGCTTCTTCCGGAGAGCCAACCTCGCCCTGCATATCAAGACGCATTTGGGAATTAAGAATTTCAAATGCGAGGTTTGCGAGAAGCGGTTCTCGACGCGTCAGAAGCTGATGGAGCACCACAACAGTCACACGGGACGTGCGCCTTTTAAATGCACCGTTTGCGACGACTCGTTTCGCCGGTACTCCAATATGGTGCAGCACAGAGACCGCCACCACTTTCATAAGAAGAGCAAGGTCCGCGACCTGGTCTGCCAGTGCGGCGCCGTGTTCCACTCGCGCGCCAAGCTGCGCTGGCACCGCGAGACGCACGACGACAAGCCCAAGGCGTGCCCGTACTGCAGCGACAAGTTCGTGCACGCGTCGTCGCTCACCCGCCACGTGCGGCGCTCGCACAACGAGTACTACCTAgacgagcgaagccgcgggagCAAGCAGAACGTGCCGTGCCCCGTCTGCAAGCAGGTGTACCTCCGCACGAACCTGCGCGCGCACCTCCTCACGCACAGCGGCAAGCGCCCCTACCTGTGCATCATCTGCAACAAAGCTTTCACCACCAAATGGAACCTCAAGCTCCACCGCTGGACCCACATGTCGCGTTCAGCGAAACCGTACAAATGCAACCTCTGCAACGGCGCTTTCATCCGACAAACCGAATACATATCACATATGAACGCCCACAAGTCCGTACGACCTTATACATGCAACTACTGCGGTTGCCAGTTCGTGAGGAAGTACAATTGCCAGCGTCACGTGCGTGAACATGAGATGGCGAAGAAGTACGTCTGCAAGGTGCCGGAGTGCGGTAAGTCGTTCCATAGGAGTTATTATTTGTCTGAACACATGAAGGTTCATAGCGGGGCTCGCCCGTTCTCTTGTACTATCTGTGGTAAGATGTCCAGTAATAAATCGAACCATAACAAGCATGTTAAGATACATCACGCGCGCGAGCCGGTGGCGAGCGAGTGGTAA
Protein Sequence: MEQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCTLSANNVGFGSRTSTPMHSERSYRSRSRTPAEDSPRWSGSHRSIDNERYWRRTPSRSSKTPVSSITRNATPTDVRIGDLNFENNSNNASSNHYPGLPFLKTDKSNQPFIQNLPVPEFDQQYVYYPDQQEDKEIKYSRSAEYSAIDNTNNVFTYNMPPLAPAVKLQTALLPTGSRRNSELVKLLPKPNNILVKTNVGGVQYITPGVKPVHLMVPTAPTFVQKNVQNNMIVSGSIPTSQILEPKTVASPLATSNSQFNQLSSGTYTPGTTVVTQNSQIIYREMVHNIDGKPFISSMPAVLSNHDNVTNVAATSSMYQNVMVVDQFGNTSCMYTTPQPILSKPCSTPMYSDVSMSNLEKSIPNSMVNEASKTLIIEVGPIVTPAPMEACTTTSTSQASQTVTETSTSPSTPVPEKPLERNESRNDTPGPSKGLKILSNIKVEVPVQHHKNLLNTVVDLTGSHEPEYSDRSASPERILPDFEDNNHSLSRDCMQPSATSNDSIVSNTFSVIKNVGNPPSYKDSVSKSCVVDNKIENEFSDSCPMPDLICKEKPSISPCSELSENGDNSTDRISISPKPEIAQPPIETLIENAKPAPQKPHRSIPLRLNNIFVKKHKKILGIKNCKTYSVSPSSSKDSQAGPSSPVRPPENFTMNKIHSCDENKDKTEPLQTVTVEVFNDNDTHHEFDADTEEQSMDIEPVAHSSISHSSQYSGVTTVQVKEEINTSNEGGFSNGTGASDRDLTPLESMRPINVIAYGNLAADDFDDESNHKELLELEAASKNNKFVSMMNENYFGDNIYADYFTPDRVESFDAARESVAFPKESQEKGLYIWGESSQKESEFVLPNFIHESYKIAESSGVEYVDVGERADAERDSKADVLSEGRSESEAPLNICADERMPPRGELSGQESNGDMESPWSGMYTEVTPAEPYDLIARESWVSDGSEIDTSEKRDNLEEEELPKPRLYTCAVCRAKFASLKEMRAHKALAHAAPTCSGASYSRLVTARSIKKEEKTEDIIPGAILLPDSKESIASTMLHVYDAIESKPTIETLIKQEPKRKRKDFVCPTCKVDQGTESAFHAHLKLHPLECLTCGKCFFRRANLALHIKTHLGIKNFKCEVCEKRFSTRQKLMEHHNSHTGRAPFKCTVCDDSFRRYSNMVQHRDRHHFHKKSKVRDLVCQCGAVFHSRAKLRWHRETHDDKPKACPYCSDKFVHASSLTRHVRRSHNEYYLDERSRGSKQNVPCPVCKQVYLRTNLRAHLLTHSGKRPYLCIICNKAFTTKWNLKLHRWTHMSRSAKPYKCNLCNGAFIRQTEYISHMNAHKSVRPYTCNYCGCQFVRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCTICGKMSSNKSNHNKHVKIHHAREPVASEW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01463610;
90% Identity: iTF_00156549;
80% Identity: -