Basic Information

Insect: Archips xylosteana
Gene Symbol: zfpm1
Assembly: GCA_947563465.1
Location: OX387351.1:20235837-20257961[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9 1.4e+02 4.0 0.3 2 23 6 27 5 27 0.96

2 14 0.028 2 9.8 0.6 1 23 1001 1024 1001 1024 0.92

3 14 4.1e-05 0.003 18.7 2.0 2 23 1123 1144 1122 1144 0.97

4 14 0.00025 0.018 16.2 3.5 1 23 1150 1172 1150 1172 0.99

5 14 0.002 0.14 13.4 3.7 1 23 1178 1200 1178 1201 0.96

6 14 0.55 40 5.7 1.7 5 23 1214 1232 1213 1232 0.96

7 14 0.35 25 6.3 1.5 3 19 1239 1255 1238 1258 0.94

8 14 1.1 78 4.8 1.0 9 23 1268 1283 1265 1283 0.89

9 14 0.017 1.2 10.5 0.1 2 23 1300 1320 1299 1320 0.97

10 14 0.0048 0.35 12.2 0.6 3 20 1328 1345 1326 1348 0.85

11 14 0.00087 0.063 14.5 0.4 1 23 1356 1378 1356 1378 0.98

12 14 0.0057 0.41 12.0 7.1 1 23 1384 1406 1384 1406 0.98

13 14 8.2e-06 0.0006 20.9 1.3 1 23 1412 1436 1412 1436 0.98

14 14 0.0021 0.15 13.3 4.8 1 23 1442 1464 1442 1465 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9	1.4e+02	4.0	0.3	2	23	6	27	5	27	0.96
2	14	0.028	2	9.8	0.6	1	23	1001	1024	1001	1024	0.92
3	14	4.1e-05	0.003	18.7	2.0	2	23	1123	1144	1122	1144	0.97
4	14	0.00025	0.018	16.2	3.5	1	23	1150	1172	1150	1172	0.99
5	14	0.002	0.14	13.4	3.7	1	23	1178	1200	1178	1201	0.96
6	14	0.55	40	5.7	1.7	5	23	1214	1232	1213	1232	0.96
7	14	0.35	25	6.3	1.5	3	19	1239	1255	1238	1258	0.94
8	14	1.1	78	4.8	1.0	9	23	1268	1283	1265	1283	0.89
9	14	0.017	1.2	10.5	0.1	2	23	1300	1320	1299	1320	0.97
10	14	0.0048	0.35	12.2	0.6	3	20	1328	1345	1326	1348	0.85
11	14	0.00087	0.063	14.5	0.4	1	23	1356	1378	1356	1378	0.98
12	14	0.0057	0.41	12.0	7.1	1	23	1384	1406	1384	1406	0.98
13	14	8.2e-06	0.0006	20.9	1.3	1	23	1412	1436	1412	1436	0.98
14	14	0.0021	0.15	13.3	4.8	1	23	1442	1464	1442	1465	0.95

Sequence Information

Coding Sequence: ATGGAGCAGCTCGTGCAGTGTCCCGTGTGCACGCTCTTCCTTCACAATGGGATGTCCTTGGAGTCCCATCTTGACACCCATCCCAAGGATCAAGTCATCAAAGCTTTGTGCACTTTGTCAGCTAGCAATGTGGGCTTTGGAAGTAGGACTTCCACACCAATGCACTCAGAGCGCTCCTACAGGAGTAGGTCCAGAACACCCGCTGAGGACAGCCCTCGGTGGAATGGCTCGCATCGCAGCATAGACAATGACAGATACTGGCGCAGGACCCCTAGTCGGTCTTCTAAAACACCTGTGTCTAATATAACCAGGAATGCAACACCCTCCGATGTGAGAATAGGGGATATAAATTTTGAAAACAACTCCAATAATACTTCTTCCAGCCATTACCCTGGGCTACCTTTCATGAAGGCTGATAAGTCCAGTCAGCCATTCATCCAAAATCTGCCTGTGCCAGAGTTTGACCAGCAGTACATTTATTACCCTGATCAGCAAGAGGATAAGGAAATAAAGTATTCCCGCAGCGCTGAGTACAGTGCCATAGACAACACAAATAATGTATTCACTTATAATATGCCACCCTTGGCCCCTGGGGTCAAGCTACAGACAGCCTTGTTGCCAGGGAGCTCTCGTAGAAATAATGAATTGGTAAAGATACTACCAAAACCTAATAACATATTAGTAAAAACAAATATGGGAGGGGTGCAATACATAACTCCTGGTGTTAAGCCAGTGCACTTGATGGTGCCGACAGCTCCTACTTTTGTACAGAAGAATGTTCAAAATAACATGATTGTGTCTGGGAGCATACCAACCAGTCAGATACTGGAGCCGAAAACTGTAGCCTCTCCGTGTAGCACCAGCAACAGTCAATTCAATCAGCTTACTTCAGGTACATTTACTCCTGGCACCACTGTGGTGACCCAAAATTCCCAGATTATCTATCGAGAGATGGTGCACAATATTGATGGGAAGCCCTTCATCTCCAGCATGCCAGCTGTTCTCAGCAGTCATGACAATGTCACCAATGTTGCTGCCACTAGCTCCATATACCAGAATGTCATGGTTGTAGACCAGTTTGGAAATACATCTTGTATGTATACAACCCCTCAACCAATTTTGTCTAAGCCATGCAATACACCACTGTACAGTGATGTGTCAATGAGTAACATTGAGAAAACTGCACCTAACAGCATGGTAAATGATACCAATAAGACTCTGATTATTGAAGTGGGTCCTATAATGACACCGGCTCCAATGGAAGCCTGCACCACTACTAGCACCTCACAAGCATCTCAGACTGTCTCCGAGACTTCAGTAACTACCACACTCCCTGAGAAGCTGTTAGAGAGAAATGAGAGCCGGAATGAGACACCAGGGCCTAGTAAGGGGCTCAAGATCCTTAGCAATATTAAGGTTGAAGTCCCTGTGCAGCATCACAAAAATTTGCTCAACACTGTAGTAGATCTCACTGGGTCACAAGAGCCTGAGTATACAGACAGGTCAGCCTCACCTGAGAGGATCCTTCCGGATTTCGAAGACAATAACCACAGCTTGTCTAGGGATTGCATGCAGCCTTCCGCAACTAGTAATGATAGCTTAGTATCAAATACTTTTTCTGTGATAAAAAATGTTGGGAACCCTCCCTCCTACAAGGACTCGGTTTCCAAGTCTTGTGTAGTAGATAATAAAATTGAAAATGAATTTACGGATAGTTGCCCCATGCCGGACCTCATTTGCAAGGAGAAACCCTCTATTTCGCCATGCAGCGAGCTTTCTGAGAATGGGGATAATTCTACTGATAGGATTTCTATATCTCCTAAACCAGAGGTTGCACCACTGTCTATTGAAACCACTATAGAAAATGCAAAGCCTGCACCGCAAAAACCTCATAGGAGTATACCCTTAAGACTGAACAATATCTATGTCAAAAAACATAAAAAAATTTTAGAGATTAAGAACTCCAAGAGTTATTCGGTGAGTCCTTCAAGTAGTAAAGACTTGCAAGCTGGGCCGTCGTCACCCATCAGACCTCCTGAAAATTTTACTATGAATAAAATTCATAGTGTAGATGAGAATAAGGACAAAACAGCTACACTGCAAACTGTGACTGTTGAGGTGTTCAATGATAATGACACCCATCATGAATTTGACGCTGACACTGAAGAGCAATCAATGGATATTGAACCAGTGGCACATTCCAGCATCAACCACTCCAGCCATTATTCTGGGGTGAATATGGTCCAAGTTAAAGAAGAGATTAACACCAGTAATGAGGGTGGTTTTAGCAATGGCACCGGAACTTCAGACCGTGATTTGACACCATTGGAGTCGATGCGGCCGATCAATGTCATCTCTTACGGGACTCTTGCGGCTGACGATTTTGACGACGAGTCGAACCACAAGGAACTGCTGGAGTTGGAAGCTGCCTCTAAAAATAACAAATTTGTAAGCATGATGAATGAAAACTATTTCGGAGACAACATCTATGCCGACTACTTTACTCCGGACCGCGTAGAATCCTTCGACGCAGCGAGAGAATCGGTGGCATTCCCTAAAGATAATCAAAAAGACGGGCTGTACATTTGGGGGGAGTCTTCCCAGAAAGATTCGGAGTTTGTGCTGCCTAACTTCATTCATGAAAGTTACAAGATAGCTGAAAGCAGCAGTGTGGAGTATGTGGAAGTCAATGAGAGGGCTGACACAGAGGGAGATACGTGTGAGAGGGACAGTAAAGTGGACGTACTGAGCGATGGAAGGAGCGAGAGCGAAGCGCCATTGAACATATGTGCCGATGAGCGGATGCCGCCGCGGGGGGAACTCAGCGGACAGGAGAGCAATGGCGACATGGAATCGCCGTGGAGTGGGATGTACACGGAGGTGACCCCAGCGGAGCCCTACGACCTGATCGCGCGAGAGAGCTGGGTCTCCGATGGCTCCGAGATTGACACCAGCGAGAAGAGAGATAACCTGGATGAAGAACTACCCAAACCCCGGCTCTACACGTGTTCGGTATGCCGCGCGAAGTTCACCTCGCTCAAAGAGATGCGCTCGCACAAGGCGCTGGCGCACGCCGCGCCGACTTGCTCCGGCGCCTCGTATAGCCGCCTCGTCACTGCCAGAAGCATCAAGAAGGAAGAGAAAACGGAGGTTATTATACCAGGGGCGATCCTCCTCCCGGACTCTAAAGAATCGATAGCAAGCACGATGCTCCAAGTATACGACGCTATTGAGTCCAAGCCTACCATAGAGACTCTTATCAAACAAGAACCCAAGCGGAAACGGAAGGACTTCGTCTGCCCAACCTGCAAGGTGGACCAGGGTACGGAGACTGCGTTCCACGCACACCTGAAGCTGCATCCGTTGGAGTGTCTCACTTGTGGGAAGTGCTTCTTCAGGAGAGCCAATCTTGCCTTGCACCTTAAGACTCATTCCGGGATCAAGAATTTCAAATGCGATGTGTGTGAGAAGCGGTTTATAACGCGGCAGAAGCTAATGGAACACCACAACACGCACACGGGCCGCGCGCCGTTCAAATGTACAATTTGCGACGATTCGTTTCGTCGCTACTCAAATATGGTGCAACACAGAGACCGACACCACTTCCATAAAAAAGCGAAGATCCGCGACTTCGTGTGCCAATGCGGCTCCGTGTTCCACTCGCGGGCCAAGCTCCAATGGCACCGCGAGACCCACGACGACAAACCCAAGGCCTGTCCCTACTGCAGCGACAAGTTCGTGCACGCGGCCTCGCTCACGCGCCACTGCCGCCGCGACGCCCCGACCCGCCCCTGTCGCGACATGTTCGCGCACGCGGCCTCGCTCACGCGCCACGTGCGCCGCACGCACAACGAGTACTACTTAGACGAGCGCAGCCGCGGGAGCAAGCAGAACGTGCCGTGCCCCGTCTGCAAACAGGTGTACCTCCGAACAAATCTCCGCGCCCACCTCCTGACGCACAGCGGCAAGCGTCCCTACCTCTGTATCATCTGCAACAAAGCCTTCACCACCAAATGGAACCTCAAACTGCACCGCTGGACCCACATGTCGCGCTCCGCGAAACCCTACAAGTGTAACTTGTGCAAGGGGGCCTTCATCCGACAAACGGAATACATATCACACATGAACGCCCACAAGTCCGTACGCCCGTACACTTGTAATTACTGTGGCTGCCAGTTCGTAAGGAAATATAATTGCCAGCGTCACGTCCGCGAGCACGAAATGGCCAAGAAGTATGTTTGCAAGGTCCCCGAGTGCGGTAAGTCGTTCCATAGGAGTTACTATTTGTCGGAACACATGAAAGTTCATAGCGGTGCTCGTCCGTTCTCCTGTAATATCTGTGGAAAAATGTCCAGCAACAAATCGAACCATAACAAACATGTGAAGATACACCATGCGAGGGAACCAGTGGCGAGCGAGTGGTAA
Protein Sequence: MEQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCTLSASNVGFGSRTSTPMHSERSYRSRSRTPAEDSPRWNGSHRSIDNDRYWRRTPSRSSKTPVSNITRNATPSDVRIGDINFENNSNNTSSSHYPGLPFMKADKSSQPFIQNLPVPEFDQQYIYYPDQQEDKEIKYSRSAEYSAIDNTNNVFTYNMPPLAPGVKLQTALLPGSSRRNNELVKILPKPNNILVKTNMGGVQYITPGVKPVHLMVPTAPTFVQKNVQNNMIVSGSIPTSQILEPKTVASPCSTSNSQFNQLTSGTFTPGTTVVTQNSQIIYREMVHNIDGKPFISSMPAVLSSHDNVTNVAATSSIYQNVMVVDQFGNTSCMYTTPQPILSKPCNTPLYSDVSMSNIEKTAPNSMVNDTNKTLIIEVGPIMTPAPMEACTTTSTSQASQTVSETSVTTTLPEKLLERNESRNETPGPSKGLKILSNIKVEVPVQHHKNLLNTVVDLTGSQEPEYTDRSASPERILPDFEDNNHSLSRDCMQPSATSNDSLVSNTFSVIKNVGNPPSYKDSVSKSCVVDNKIENEFTDSCPMPDLICKEKPSISPCSELSENGDNSTDRISISPKPEVAPLSIETTIENAKPAPQKPHRSIPLRLNNIYVKKHKKILEIKNSKSYSVSPSSSKDLQAGPSSPIRPPENFTMNKIHSVDENKDKTATLQTVTVEVFNDNDTHHEFDADTEEQSMDIEPVAHSSINHSSHYSGVNMVQVKEEINTSNEGGFSNGTGTSDRDLTPLESMRPINVISYGTLAADDFDDESNHKELLELEAASKNNKFVSMMNENYFGDNIYADYFTPDRVESFDAARESVAFPKDNQKDGLYIWGESSQKDSEFVLPNFIHESYKIAESSSVEYVEVNERADTEGDTCERDSKVDVLSDGRSESEAPLNICADERMPPRGELSGQESNGDMESPWSGMYTEVTPAEPYDLIARESWVSDGSEIDTSEKRDNLDEELPKPRLYTCSVCRAKFTSLKEMRSHKALAHAAPTCSGASYSRLVTARSIKKEEKTEVIIPGAILLPDSKESIASTMLQVYDAIESKPTIETLIKQEPKRKRKDFVCPTCKVDQGTETAFHAHLKLHPLECLTCGKCFFRRANLALHLKTHSGIKNFKCDVCEKRFITRQKLMEHHNTHTGRAPFKCTICDDSFRRYSNMVQHRDRHHFHKKAKIRDFVCQCGSVFHSRAKLQWHRETHDDKPKACPYCSDKFVHAASLTRHCRRDAPTRPCRDMFAHAASLTRHVRRTHNEYYLDERSRGSKQNVPCPVCKQVYLRTNLRAHLLTHSGKRPYLCIICNKAFTTKWNLKLHRWTHMSRSAKPYKCNLCKGAFIRQTEYISHMNAHKSVRPYTCNYCGCQFVRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKMSSNKSNHNKHVKIHHAREPVASEW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01463610;
90% Identity: iTF_00325770; iTF_00155599; iTF_00021631; iTF_00342540; iTF_01135099; iTF_01136092;
80% Identity: -