Pcor021294.1
Basic Information
- Insect
- Pandemis corylana
- Gene Symbol
- -
- Assembly
- GCA_949127965.1
- Location
- OX421872.1:5401252-5403717[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.8 3.3e+03 -1.1 0.1 22 33 236 247 233 258 0.81 2 5 1.1e-08 1.3e-05 25.8 0.1 2 45 268 313 267 314 0.94 3 5 2.2e-09 2.6e-06 28.1 0.4 2 44 321 367 320 369 0.94 4 5 3.2e-09 3.8e-06 27.6 0.0 1 42 373 414 373 415 0.98 5 5 8e-07 0.00095 19.9 0.0 4 46 426 470 424 470 0.97
Sequence Information
- Coding Sequence
- ATGGATACGGATAGCGACATCGACAGCGACGAAGAGTCACAGTTAAACGATTTAGCGCAATTACAGGCCGCTTTAGACGACGATGAGCCCTCCTCCTTGTTCCTCGAGTCGTGTGCGAGTGCCAGCGGCAGTAACACGCTGCTATCTCAGTCCATACCAAGCATCTCCAGTGCCGATGCCGCTCAGGAACATGCGAGAATCGACGCAGCACTAGGACTTAATAAACTACTagacgaaaaattaaagaggcTTGAAAAGGTACTGGTCGGCCGCTTGCATGAATGCAGACAAAAGTTAAGGGATTTGCACGATCTAGCAGGGCCTGCTGACAAACAGGATCGCCAGGAAACATTCCGCTACATAAACTGCGGTAAGCCTTATTTCAAAGACAAAACCAACTTTCCAGCCCCTGATAATGAAGACACCATACTCATGGCCAAAAGTAGCATGTATGACTTCTCTGAAATCTCTAGTGTCCCTGGCTGGACAGTCAAAGACAAGAGCAGCTTCACAAACCTCATTCTGAAGATGTCCATAGACTTTAAAAAGAAAGAGTTAACTTCTAAAATTGCCCACTTGAAACGGGACAAGAAAGATATTAAGCCTAAGCAGTTAGAAAAGAAGATTGATGCCATCAACAAAGAAATCATGGCTTTAAACAATAAGTCATTAAAAGATGTGGCTTTGCCATTAGATCAAGAGTATGATTGGGATATTGTGGCCAACAAGCTCAACAGACGCCACAGTGCCACAGAGTATAGATCACTATGGAAAGTATTTTTGCATCCCAGTATTAACAAGAGTGTTTGGGATAAAGCAGAGCATAGCCGCTTGCATGATATAGCAAATGAACACAATTTACAAGACTGGGATTCTGTTGCTAAAGTTCTCAACACAGGCAGGACTGGATACCAATGCTTTGTTTACTTCAGAACAAACATGAGCAACACTTTTACAGGGAAAAAATGGACCAAAGAAGAAGAGGAATATCTTAGAAGACTAATTGAGTATTACAAGGAAGATGAATATATACCTTGGGGGAAAGTGGCCTCCTCTATGGAAAACCGCACTAAAATCCAGATATATAATAAATACTTTAGGTTGGTTGAAAAAAGGAAAGGAAGATTCCTTCCAGAAGAAGATGCAGTTATTTTGACATGCCTTGACAAGTTTGGATTGAACTTTAAGAAGATGTCAGAATATCTACCTGGTCGCTCGGCGTCACAAATTCGTGTGCGCTATGGAGTTTTAGCTAAAAAGAGGATTTCCACCATCTGGACTGTTCAAGAAGACAAAAAGTTATTACAGATAATGGCCAATGAAGATAGCCTCACCAATTATTCGTGTGTCACAGACCACTTTCCAGGAAAAACGCGTGTACATATAAGAGGAAGATATATTACGTTGTTGAAATGGATGAAAAGACATCCTAACTCAACACTAGATAATGCTCCGCGAAGAGGCGCGCGCCGCCTGGGTCATGGGCTTGCATCTGACAATCTCAACAAAGCTACAGAAAAACTAAAGAACCGAATTGAATgtgaaattgaaaaaagaaagaGCAAAAGGATAACAAGAGAATCGCCTCTTGAAGTTATAGAAGATGCCATTGTTGCCAACCTTTTAACTGAAAAAGTCAAAGAGGAAGAAATAAGAAAAGCAGAAGTTGATACTGATGACTTATTAGTCCTGAATGATGACTTTGTGATATCAGCACAGTCCCTGAATGTCACAAATCTGCAGAAACTGATCATCTTTTTAAAGGGAAAGTTGAATAAAGACCGTTTTACGGCAAGCTCGTTTGCTGAACAATATCCAGGACTATTGGACTCTCAGCAAGAAGTTAATCTCTTCCAGGTTAAGAGTTACTCTAAGAAAGGAAAAACAGTAACACCATTGGTAGTGAACACTCCAGATATCTGGGGAAAGAACACCTTAGGCTCCTTAAATTATGTGCTTCCACCACACTATGCCTCAATAACTggatgtagaaaacttatggCATACATCAATATTAAGACCAGGAAAGACACTAGCATGCAATCTATTAACATAAATGGAATGATGAGAAGAAATCCCATTTTGAAGCAGCAGATGTTACTTTTGATGGAAAGATTCAATGCATTGTTCCTGTTCCCTATGCtactgtcaaatgaaggtcCTGAGCGAGTGGgaaagaatattttaaaagaccGAAAGGTTATGCAGGACATTGatttggaagaaaaaaaacaaattgatcCTACTAGTGAAAAAATTTGTTCAGACATTCCACAAAGAGCTATGAGCTTGGGAGAGGTGTGCAGTGTTACAAACAGTGTGATAGATCTAGAGGACCCCAGTCCAGAACAGCAAGCTTTAACATGTGTGCAAATGGTGGTTGTTGACGACAATGCCTTTAGATTTGTTACAGTCAATGACAAGAAAAAtgttcaaaagaaaaaaaagctgATGTATTTCACATGA
- Protein Sequence
- MDTDSDIDSDEESQLNDLAQLQAALDDDEPSSLFLESCASASGSNTLLSQSIPSISSADAAQEHARIDAALGLNKLLDEKLKRLEKVLVGRLHECRQKLRDLHDLAGPADKQDRQETFRYINCGKPYFKDKTNFPAPDNEDTILMAKSSMYDFSEISSVPGWTVKDKSSFTNLILKMSIDFKKKELTSKIAHLKRDKKDIKPKQLEKKIDAINKEIMALNNKSLKDVALPLDQEYDWDIVANKLNRRHSATEYRSLWKVFLHPSINKSVWDKAEHSRLHDIANEHNLQDWDSVAKVLNTGRTGYQCFVYFRTNMSNTFTGKKWTKEEEEYLRRLIEYYKEDEYIPWGKVASSMENRTKIQIYNKYFRLVEKRKGRFLPEEDAVILTCLDKFGLNFKKMSEYLPGRSASQIRVRYGVLAKKRISTIWTVQEDKKLLQIMANEDSLTNYSCVTDHFPGKTRVHIRGRYITLLKWMKRHPNSTLDNAPRRGARRLGHGLASDNLNKATEKLKNRIECEIEKRKSKRITRESPLEVIEDAIVANLLTEKVKEEEIRKAEVDTDDLLVLNDDFVISAQSLNVTNLQKLIIFLKGKLNKDRFTASSFAEQYPGLLDSQQEVNLFQVKSYSKKGKTVTPLVVNTPDIWGKNTLGSLNYVLPPHYASITGCRKLMAYINIKTRKDTSMQSININGMMRRNPILKQQMLLLMERFNALFLFPMLLSNEGPERVGKNILKDRKVMQDIDLEEKKQIDPTSEKICSDIPQRAMSLGEVCSVTNSVIDLEDPSPEQQALTCVQMVVVDDNAFRFVTVNDKKNVQKKKKLMYFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00325324; iTF_01135702; iTF_00462337; iTF_00342147; iTF_00021276; iTF_00155245; iTF_00156192;
- 90% Identity
- iTF_01135702;
- 80% Identity
- -