Basic Information

Gene Symbol
-
Assembly
GCA_963691745.1
Location
OY829494.1:5839136-5841601[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.4 4e+03 -1.3 0.0 22 33 236 247 233 257 0.84
2 5 3.7e-09 4.3e-06 27.4 0.1 2 45 268 313 267 314 0.94
3 5 7.3e-09 8.6e-06 26.5 0.4 2 44 321 367 320 369 0.94
4 5 3.5e-09 4.1e-06 27.5 0.0 1 42 373 414 373 415 0.98
5 5 1.2e-06 0.0014 19.4 0.0 4 46 426 470 424 470 0.97

Sequence Information

Coding Sequence
ATGgagacggatagcgacttcgaCAGTGATGAAGAAGCGCAACTAAACGATTTAGCGCAACTACAAGCCGCTTTAGAAGACGACGAACCTTCTACTTTCTTCCCAGAGCCGTCATCGAGTGGCAGTTGGACTAACTCGCAACATTCTCGCTCCATACCAAGTACTTCGAGTGCGGACGCAACTCAGGAGCACGCAAGGATTGACGCTGCCCTAGGACTCAATAAATTACTAGACGAAAAGTTAAAAAGACTAGAGAAAGTATTAGTAGGCCGCTTGCATGAATGTAGACAAAAGCTACGCGATTTACACGCTCTAGCAGTACCTGCTGACAAACAGGATCGACAGGAAACCTTCCGCTACGTAAACTGTGGTAAGCCTTATTTTAAAGACAAATCAAACTTCCCAGCCCCTGATAATGAGGACACCATACTCATGGCTAAAAGTAACATGTATGACTTCTCCGAAATCACTGCTGTCCCTGGCTGGACAGTCAAAGATAAGAGCAGCTTCACCAACCTCCTACTGAAAATGTCCATAGACATTAAAAAGAAAGAGCTGACTTCTAAAATCGCGCAGTTGAAACGAGAAGGAAAAGATATTAAACCTAAacaactagaaaaaaaaattgatgctttaaacaaagaaattaCAGCTTTaagtaacaaaactttgaaaGATGTAGCTTTGCCCATAGACCAAGAGTATGATTGGGAAATTGTAGCCAACAAACTCAACAGAAGGCACAGTGCCGCTGAGTATAGATCATTATGGAAAGTGTTTTTGCATCCCAGTATTAACAAGAGTGTTTGGGACAAAGCTGAGCATACTCGCTTGCATAATATTGCCCATCAACACAACCTACAAGACTGGGATGCTATAGCAAAGGAGCTCAACTCAGGCAGGACAGGCTATCAATGCTTTGTTTACTTCAGGACAAATATGAGTAACACTTTTACTGGCAAAAAATGGACTAGAGAAGAAGAGGAATACCTAAGGAGATTGATTGAGTATTACAAGGAAGATGAATATATCCCGTGGGGCAAAGTTGCTTCTTCCATGGAAAACCGCACTAAGATCCAGATATACAATAAGTATTTTAGGCTTGTTGAAAAAAGGAAAGGCAGATTTCTTCCAGAAGAAGATGCAGTGATTTTAACATGCCTTGACAAGTTTGGATTGAACTTTAAGAAAATGTCAGAGTATCTTCCTGGTCGCTCTGCAACTCAAATTCGTGTACGCTATGGAGTCCTGGCAAAAAAGAGAATTTCCACCATCTGGACTGTTCAAGAAGACAAGAAATTGTTACAGATAATGTCAAATGAAGATAGCATCACCAATTATTCCTGTGTTACCGATCATTTTCCAGGAAAAACCCGTGTTCATATACGAGGAAGATACATAACATTGTTAAAATGGATGCAAAGACATCCAAACTCTACTCTTGACAATGCACCAAGGAGAGGCGCGCGCCGCTTAGGTCACGGACTCGCGTCAGACAATCTCAACAAAGCAACAGAAAAACTCAAACAAAGAATAGAATGTGAAATTGAAAGTAGAAAAATCAAAAGAATCACAAGAGAGTCACCTCTTGAAGTTATAGAAGATGCCATCATTGCAAATCTTCAAACTGAACATGTCAAAGAGGAAGAAATAAGGAAAGCCGAGGTTTATGATGATGAAGAAGTATTAGTTCTCAATGATGAATTTGTAATATCAGCACAATCCTTAAATGTAACAAATCTCCAAAAGCTGATCATTTTCTTAAGAGGAAAGTTGAATCGAGATCGCTTTAAAGGAAGCTCTTTTGCTGATCAGTATCCAGGGCTTTTGGACTCACAAAAACAAGTTAATCTCTTCCAAATCAAAAGCTACTCTAAAAAAGGGAAAACAGTACCAGTGGTCGTCAACCCTCCAGATATTTGGGGAAATAATACCTTGAGTTCCCTTAATTACGTGCTTCCTGCGCACTATGCTACAATAATTGGATGTAGAAAACTAATGGCATATGTCAACATAAAGGCCAGGAAAGACGCTGGTATGGCATCTTGTACCAACATCAGTGGAATGatgaaaagaaattccattTTCAAAGAGCAAATGTACCTTTTAATGGAAAGATTCAATGCACTGTTCTTGTATCCAATGCTGTTGTCAAATGAAGGTCCAGAACGAGCAGGAAGGCATGTTTTGGGGAGTACATCTAGGAAGGAAGTTGCTTCAcaggaaaaattgaaaattggACCAAATTTCACCTCCCTCAGTGTAGGCATTCCATgtagaactatgaaattggGACACTCAACCAATGAGAATGGCAGCATAGATCTGGCGGAGCCCAGTGCAGACGAGAAGGCACAAACTTGTGTGCGTAAGGTGGTCGTTGACGACAATGCCTTCAGATTTGTTACAGACaaagagaaaaaatataaaaaaaaacaaaagctaatACATTTCTCTTCATTATAA
Protein Sequence
METDSDFDSDEEAQLNDLAQLQAALEDDEPSTFFPEPSSSGSWTNSQHSRSIPSTSSADATQEHARIDAALGLNKLLDEKLKRLEKVLVGRLHECRQKLRDLHALAVPADKQDRQETFRYVNCGKPYFKDKSNFPAPDNEDTILMAKSNMYDFSEITAVPGWTVKDKSSFTNLLLKMSIDIKKKELTSKIAQLKREGKDIKPKQLEKKIDALNKEITALSNKTLKDVALPIDQEYDWEIVANKLNRRHSAAEYRSLWKVFLHPSINKSVWDKAEHTRLHNIAHQHNLQDWDAIAKELNSGRTGYQCFVYFRTNMSNTFTGKKWTREEEEYLRRLIEYYKEDEYIPWGKVASSMENRTKIQIYNKYFRLVEKRKGRFLPEEDAVILTCLDKFGLNFKKMSEYLPGRSATQIRVRYGVLAKKRISTIWTVQEDKKLLQIMSNEDSITNYSCVTDHFPGKTRVHIRGRYITLLKWMQRHPNSTLDNAPRRGARRLGHGLASDNLNKATEKLKQRIECEIESRKIKRITRESPLEVIEDAIIANLQTEHVKEEEIRKAEVYDDEEVLVLNDEFVISAQSLNVTNLQKLIIFLRGKLNRDRFKGSSFADQYPGLLDSQKQVNLFQIKSYSKKGKTVPVVVNPPDIWGNNTLSSLNYVLPAHYATIIGCRKLMAYVNIKARKDAGMASCTNISGMMKRNSIFKEQMYLLMERFNALFLYPMLLSNEGPERAGRHVLGSTSRKEVASQEKLKIGPNFTSLSVGIPCRTMKLGHSTNENGSIDLAEPSADEKAQTCVRKVVVDDNAFRFVTDKEKKYKKKQKLIHFSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01134738;
90% Identity
-
80% Identity
-